Definition | Rickettsia akari str. Hartford, complete genome. |
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Accession | NC_009881 |
Length | 1,231,060 |
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The map label for this gene is 157825728
Identifier: 157825728
GI number: 157825728
Start: 595074
End: 595514
Strand: Reverse
Name: 157825728
Synonym: A1C_03270
Alternate gene names: NA
Gene position: 595514-595074 (Counterclockwise)
Preceding gene: 157825729
Following gene: 157825723
Centisome position: 48.37
GC content: 29.25
Gene sequence:
>441_bases TTGATTGCAGATAAGAAGTATAATCTAGCTTTAGAAAAAATTGATGAAGTTCTAAACAATGAGGCTCAAAATCAAGAAGT GCTTAAAATAGGTTTAGAGGTTGCTTCATTAATTAACAATCACAAAAAGATACAGCAATATTCTAATCTCTTACCTAAAT ATGATAACTATGAGATACCCAAAGAGTGGGATCCTATAGAAATCCATCAATTTCGTACTATACAACAAATTAATCGCCAC CAAGAAATTATTACTAATATTATATGGCATATTGCAAAAGAGCATGATATGACTATTAACGACGTTATTCCGCTTGGTAA ATATAGAGATTTAGATTGTTACGGAAAAATTGGTGAAAAATTACAAGAAGAACTAGATAAGAATCAGTATGATAAATTTA TAGATGCCTTAAAGAAAGGTATAATACATAGAACAAGGTGA
Upstream 100 bases:
>100_bases TGAAAAACATAACACTCAAATCCATATAGAAAATCTTACAAATAAACTTCATTTTTCATCAGACTAAGCTATAAAAATAG TTGATACGGTTAGCATCGAT
Downstream 100 bases:
>100_bases ATTACTGATAAATTTGGACCATCAATGGAATCATAATGATGTAATAAAATTTTCCGGTGAACATCATCTAGAATTTCATC AAGATTTGTTATAGCTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MIADKKYNLALEKIDEVLNNEAQNQEVLKIGLEVASLINNHKKIQQYSNLLPKYDNYEIPKEWDPIEIHQFRTIQQINRH QEIITNIIWHIAKEHDMTINDVIPLGKYRDLDCYGKIGEKLQEELDKNQYDKFIDALKKGIIHRTR
Sequences:
>Translated_146_residues MIADKKYNLALEKIDEVLNNEAQNQEVLKIGLEVASLINNHKKIQQYSNLLPKYDNYEIPKEWDPIEIHQFRTIQQINRH QEIITNIIWHIAKEHDMTINDVIPLGKYRDLDCYGKIGEKLQEELDKNQYDKFIDALKKGIIHRTR >Mature_146_residues MIADKKYNLALEKIDEVLNNEAQNQEVLKIGLEVASLINNHKKIQQYSNLLPKYDNYEIPKEWDPIEIHQFRTIQQINRH QEIITNIIWHIAKEHDMTINDVIPLGKYRDLDCYGKIGEKLQEELDKNQYDKFIDALKKGIIHRTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17365; Mature: 17365
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIADKKYNLALEKIDEVLNNEAQNQEVLKIGLEVASLINNHKKIQQYSNLLPKYDNYEIP CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC KEWDPIEIHQFRTIQQINRHQEIITNIIWHIAKEHDMTINDVIPLGKYRDLDCYGKIGEK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHH LQEELDKNQYDKFIDALKKGIIHRTR HHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIADKKYNLALEKIDEVLNNEAQNQEVLKIGLEVASLINNHKKIQQYSNLLPKYDNYEIP CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC KEWDPIEIHQFRTIQQINRHQEIITNIIWHIAKEHDMTINDVIPLGKYRDLDCYGKIGEK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHH LQEELDKNQYDKFIDALKKGIIHRTR HHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA