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The map label for this gene is 157825707

Identifier: 157825707

GI number: 157825707

Start: 577294

End: 577905

Strand: Reverse

Name: 157825707

Synonym: A1C_03165

Alternate gene names: NA

Gene position: 577905-577294 (Counterclockwise)

Preceding gene: 157825708

Following gene: 157825699

Centisome position: 46.94

GC content: 29.9

Gene sequence:

>612_bases
ATGACTATAAAAATTTATCAAAACGACCTACCTGATAATTTTGAACTTGAAGGAGATATCGCTATAGATACCGAAACAAT
GGGCTTAAATCTACATAGAGATAAACTATGTTTGCTACAATTTAGTAACGGCAATGGTGAAGCCCATCTTGTTCATTTTG
TAAATCAAGATTACACTGCTCCTAATTTAAAAGCGTTATTGCTAGATAAAACTAGATGCAAGATATTTCATTTTGCTAGA
TTTGATTTAGCATCTATAAAACAATATTTAAGTATAGATTTAGAAAATATATTTTGTACTAAAATATCTTCAAAACTAGT
TAGAACCTATACAGATAACCACGGTCTTAAGGATTTATGCCGAGAATTGCTTAATATAAATATTTCAAAACAACAACAAT
CTTCCTATTGGGGTACTGACAATTTATCTTCAGAACAAAAAGAATATGCAGCAAAAGATGTGCTTTATTTGCATCAGTTA
AAAGATATGTTACAAAAAATGCTACTGAGAGAAAATAGGCTCGAGCTTGCCCATGATATTTTTCGTTTTTTACCAACAAG
AGCTAATTTAGACCTTATCGGTTGGAATGAAATCGATATTTTTATGCATTAA

Upstream 100 bases:

>100_bases
TGCATGACGCTTGTGTCATTCCCGCTTCTGCGGGAATGACATAGAATAAATGAGCAGAACATCCAAAACAACATGATTAA
AAAAGAATTAAATATAATTT

Downstream 100 bases:

>100_bases
TTTAAATTAAGATAAGTTAATAAAGATATTAAATGTATTAACATAGTAAATTGACTTCAAGTATAAAATCCTGCACTCTA
TTTAAAGAGGGCATCGATGT

Product: ribonuclease D

Products: NA

Alternate protein names: Ribonuclease D; 3-5' Exonuclease Family Protein; RNAse D Protein; 3- 5' Exonuclease Family Protein; Exonuclease; Ribonuclease; 3-5' Exonuclease Domain-Containing Protein; RNAse D; Ribonuclease D 3-5' Exonuclease

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MTIKIYQNDLPDNFELEGDIAIDTETMGLNLHRDKLCLLQFSNGNGEAHLVHFVNQDYTAPNLKALLLDKTRCKIFHFAR
FDLASIKQYLSIDLENIFCTKISSKLVRTYTDNHGLKDLCRELLNINISKQQQSSYWGTDNLSSEQKEYAAKDVLYLHQL
KDMLQKMLLRENRLELAHDIFRFLPTRANLDLIGWNEIDIFMH

Sequences:

>Translated_203_residues
MTIKIYQNDLPDNFELEGDIAIDTETMGLNLHRDKLCLLQFSNGNGEAHLVHFVNQDYTAPNLKALLLDKTRCKIFHFAR
FDLASIKQYLSIDLENIFCTKISSKLVRTYTDNHGLKDLCRELLNINISKQQQSSYWGTDNLSSEQKEYAAKDVLYLHQL
KDMLQKMLLRENRLELAHDIFRFLPTRANLDLIGWNEIDIFMH
>Mature_202_residues
TIKIYQNDLPDNFELEGDIAIDTETMGLNLHRDKLCLLQFSNGNGEAHLVHFVNQDYTAPNLKALLLDKTRCKIFHFARF
DLASIKQYLSIDLENIFCTKISSKLVRTYTDNHGLKDLCRELLNINISKQQQSSYWGTDNLSSEQKEYAAKDVLYLHQLK
DMLQKMLLRENRLELAHDIFRFLPTRANLDLIGWNEIDIFMH

Specific function: Unknown

COG id: COG0349

COG function: function code J; Ribonuclease D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.26.3

Molecular weight: Translated: 23739; Mature: 23607

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIKIYQNDLPDNFELEGDIAIDTETMGLNLHRDKLCLLQFSNGNGEAHLVHFVNQDYTA
CEEEEEECCCCCCEEECCCEEEECEECCCEECCCEEEEEEEECCCCCEEEEEEECCCCCC
PNLKALLLDKTRCKIFHFARFDLASIKQYLSIDLENIFCTKISSKLVRTYTDNHGLKDLC
CCCEEEEEECCHHEEEEEHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
RELLNINISKQQQSSYWGTDNLSSEQKEYAAKDVLYLHQLKDMLQKMLLRENRLELAHDI
HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FRFLPTRANLDLIGWNEIDIFMH
HHHCCCCCCEEEEECCEEEEEEC
>Mature Secondary Structure 
TIKIYQNDLPDNFELEGDIAIDTETMGLNLHRDKLCLLQFSNGNGEAHLVHFVNQDYTA
EEEEEECCCCCCEEECCCEEEECEECCCEECCCEEEEEEEECCCCCEEEEEEECCCCCC
PNLKALLLDKTRCKIFHFARFDLASIKQYLSIDLENIFCTKISSKLVRTYTDNHGLKDLC
CCCEEEEEECCHHEEEEEHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
RELLNINISKQQQSSYWGTDNLSSEQKEYAAKDVLYLHQLKDMLQKMLLRENRLELAHDI
HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FRFLPTRANLDLIGWNEIDIFMH
HHHCCCCCCEEEEECCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA