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The map label for this gene is lpsE [H]

Identifier: 157825698

GI number: 157825698

Start: 564528

End: 565550

Strand: Reverse

Name: lpsE [H]

Synonym: A1C_03120

Alternate gene names: 157825698

Gene position: 565550-564528 (Counterclockwise)

Preceding gene: 157825699

Following gene: 157825697

Centisome position: 45.94

GC content: 28.93

Gene sequence:

>1023_bases
ATGAAAGTACTCAATATTATGCTAAGCCGTGATCTTGGCGGAATTCAACAAGCATTTTTAGATTATAATGCAGCTCTTGA
AATGCAAAAAATTGAGATTACAAATATCACTTCTTACAAAGCAAAAATAAATTCTTTTCTACGTAAGACAAGTTTTAAAC
TACCTAACTTAGTACCTATTGATCCGTTATCGGTACTTATTCTTAAATATATAATCTACAAAATTAAGCCCGATATAATT
ATAGCACATGGCAATAGAGCAATAAATTTTAGTAAATTTATTAAATCACAAAATATAAAATTAATCGGTATCGCTCATAA
TTATAGTTTAAAAGGACTACGTAAATGTGATTTTGTTATTGCATTGACACATCATATGGAAGAATTTTTACTAAAAAATA
ACTTTGCCAAATCTAGGATATGCATCCTACCGAATATGATAAATATTTATAAAGACTTTACTCCAAATAAAACATATAGA
AAACCTATCGTAATTGGTGTACTAGCAAGATTTGTAGCTAAAAAAGGTGTTGATGTTTTTATTAATGCTATAAAAATTTT
AAAAGAAAAAAAATATGATATTCAAGCTGTTATAGGTGGAAACGGTGAGGAAAAAGATAATTTAATTGCTTTAGCACGTA
AACTTAATTTACAAGGTAAAATATCATTTACGGGATGGGTTAACGATAAAGATAAATTTTTTAAACAAATAGATATTTTT
TGTTTACCGTCTCTTCATGAACCGTTTGGAATTATAGTGCTTGAAGCAATAGAGGCAAGCGTGCCTCTCGTTAGTACAGA
TACTGAAGGGCCTGCAGAACTCTTAAAGCATATGCAAGACGGTCTTATTTGTAAAGCCGGATCTGCTGAAGATTTAGCAG
AAAAAATTGTCTATCTAATAGATAACCCATTAAAAGCAAAAGAATTTTCTAAAAATGCCTACCTTACTCTTAAACAAAAT
TATGACATTAAAGTTGTTTCTAAAAAGTTAGCAACATTATTACGCAGTTACAACAATAGTTAG

Upstream 100 bases:

>100_bases
GTTACTATGGTTAAAAAATGTTAGCAAAAAATAGACCTTTAGATGAAATTATGTAATTTACCGATTTAACAGCAGAAGAA
ATCGAAAAATTAAAGTAGCA

Downstream 100 bases:

>100_bases
TTGAAACAATAATAGTCTATATTGACATCATAGCTTAAAGATGCATAAGTAATATTAATTTATTTTAATGAACCTGCTCA
AGAGTTTTTTTCTCATTCCT

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MKVLNIMLSRDLGGIQQAFLDYNAALEMQKIEITNITSYKAKINSFLRKTSFKLPNLVPIDPLSVLILKYIIYKIKPDII
IAHGNRAINFSKFIKSQNIKLIGIAHNYSLKGLRKCDFVIALTHHMEEFLLKNNFAKSRICILPNMINIYKDFTPNKTYR
KPIVIGVLARFVAKKGVDVFINAIKILKEKKYDIQAVIGGNGEEKDNLIALARKLNLQGKISFTGWVNDKDKFFKQIDIF
CLPSLHEPFGIIVLEAIEASVPLVSTDTEGPAELLKHMQDGLICKAGSAEDLAEKIVYLIDNPLKAKEFSKNAYLTLKQN
YDIKVVSKKLATLLRSYNNS

Sequences:

>Translated_340_residues
MKVLNIMLSRDLGGIQQAFLDYNAALEMQKIEITNITSYKAKINSFLRKTSFKLPNLVPIDPLSVLILKYIIYKIKPDII
IAHGNRAINFSKFIKSQNIKLIGIAHNYSLKGLRKCDFVIALTHHMEEFLLKNNFAKSRICILPNMINIYKDFTPNKTYR
KPIVIGVLARFVAKKGVDVFINAIKILKEKKYDIQAVIGGNGEEKDNLIALARKLNLQGKISFTGWVNDKDKFFKQIDIF
CLPSLHEPFGIIVLEAIEASVPLVSTDTEGPAELLKHMQDGLICKAGSAEDLAEKIVYLIDNPLKAKEFSKNAYLTLKQN
YDIKVVSKKLATLLRSYNNS
>Mature_340_residues
MKVLNIMLSRDLGGIQQAFLDYNAALEMQKIEITNITSYKAKINSFLRKTSFKLPNLVPIDPLSVLILKYIIYKIKPDII
IAHGNRAINFSKFIKSQNIKLIGIAHNYSLKGLRKCDFVIALTHHMEEFLLKNNFAKSRICILPNMINIYKDFTPNKTYR
KPIVIGVLARFVAKKGVDVFINAIKILKEKKYDIQAVIGGNGEEKDNLIALARKLNLQGKISFTGWVNDKDKFFKQIDIF
CLPSLHEPFGIIVLEAIEASVPLVSTDTEGPAELLKHMQDGLICKAGSAEDLAEKIVYLIDNPLKAKEFSKNAYLTLKQN
YDIKVVSKKLATLLRSYNNS

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 38448; Mature: 38448

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLNIMLSRDLGGIQQAFLDYNAALEMQKIEITNITSYKAKINSFLRKTSFKLPNLVPI
CCCEEEEHHCCCCHHHHHHHHHHHHEEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCC
DPLSVLILKYIIYKIKPDIIIAHGNRAINFSKFIKSQNIKLIGIAHNYSLKGLRKCDFVI
CHHHHHHHHHHHHHCCCCEEEEECCCEEEHHHHHHCCCEEEEEEEECCCCCCCCHHHHEE
ALTHHMEEFLLKNNFAKSRICILPNMINIYKDFTPNKTYRKPIVIGVLARFVAKKGVDVF
HHHHHHHHHHHHCCCCCCEEEECCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHH
INAIKILKEKKYDIQAVIGGNGEEKDNLIALARKLNLQGKISFTGWVNDKDKFFKQIDIF
HHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHCEE
CLPSLHEPFGIIVLEAIEASVPLVSTDTEGPAELLKHMQDGLICKAGSAEDLAEKIVYLI
EECCCCCCHHEEEEEEHHCCCCEEECCCCCHHHHHHHHHCCCEEECCCHHHHHHHHHHHH
DNPLKAKEFSKNAYLTLKQNYDIKVVSKKLATLLRSYNNS
CCCCCHHHCCCCEEEEEECCCCEEHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKVLNIMLSRDLGGIQQAFLDYNAALEMQKIEITNITSYKAKINSFLRKTSFKLPNLVPI
CCCEEEEHHCCCCHHHHHHHHHHHHEEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCC
DPLSVLILKYIIYKIKPDIIIAHGNRAINFSKFIKSQNIKLIGIAHNYSLKGLRKCDFVI
CHHHHHHHHHHHHHCCCCEEEEECCCEEEHHHHHHCCCEEEEEEEECCCCCCCCHHHHEE
ALTHHMEEFLLKNNFAKSRICILPNMINIYKDFTPNKTYRKPIVIGVLARFVAKKGVDVF
HHHHHHHHHHHHCCCCCCEEEECCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHH
INAIKILKEKKYDIQAVIGGNGEEKDNLIALARKLNLQGKISFTGWVNDKDKFFKQIDIF
HHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHCEE
CLPSLHEPFGIIVLEAIEASVPLVSTDTEGPAELLKHMQDGLICKAGSAEDLAEKIVYLI
EECCCCCCHHEEEEEEHHCCCCEEECCCCCHHHHHHHHHCCCEEECCCHHHHHHHHHHHH
DNPLKAKEFSKNAYLTLKQNYDIKVVSKKLATLLRSYNNS
CCCCCHHHCCCCEEEEEECCCCEEHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11157937; 11481430 [H]