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The map label for this gene is ldcA [C]

Identifier: 157825677

GI number: 157825677

Start: 541716

End: 542669

Strand: Direct

Name: ldcA [C]

Synonym: A1C_02995

Alternate gene names: 157825677

Gene position: 541716-542669 (Clockwise)

Preceding gene: 157825676

Following gene: 157825679

Centisome position: 44.0

GC content: 31.55

Gene sequence:

>954_bases
ATGATTCTTAAAAATTTATCTTTACTAATAATATTATTCTTTTCAATATCAGCTTTTTCTGCTGCGACTAACCTAAAAAA
TATCCATATTACTGTTGTTGCTCCGGCAACAGGTGCTGATAATAAGACTTTATCGGATTTAAAAAATATTAATGGATTAA
ATTTACAAATTCATTCTAAGTGTTTTTCTAAAGGTAAGCTACCCTTTCTTGCAAGTAGCGATGAAGTAAGATTTAATTGC
CTGCGGGATGCCTTATTTGATGAGTCTGATAATATAGTATGGAGTTTACGAGGTGGTTATGGCTCTGCTAGAATAATTCC
AGGTTTACTAAAGCTACCAAAACCAAATAGAGAGAAATTCTTTATAGGATATAGTGATATAACGGCTTTACATCTTTTTC
TATCACAAGAATGGGGATGGAAAACTATTCATGGTAGTAATATAGCTGACTTATTAAAAACTGATAAAGATCATAGTAAT
TTTATCAAGCTTGCTGAAATATTAAAAGGTCATGTAAAGCAGGTTAATATAGAGAACTTAGTACCTCTTAACAATATAGC
AAAATCAAGTGATCTTGTTAACGGTAAACTAACAGGCGGTAACTTAACTATGGTACAAACTAGTATAGGAACGAGTTGGC
AAATAAAGACCAAAGGCAAAATTCTTTTCTTAGAAGATGTGAATGTAGCTCCTTTTAGATTAGATCGTGAGCTTTTACAC
TTAAAGCAAGCAGGGTTACTTGAGGATGTTAAAGCTATAATATTTGGTTCATTTGGTAAAGATCTTGACGCCACAATGTT
AGTGCTTCGTAATTTTGCGGATCATTTAAATATTCCGGTATTTAAAACAAATAGATTCGGTCATGAAAAAATTAATGATC
CGATTATTTATAATACGGATAGTAAGATTGTCATGGGGAAGAATAAAGGATTTAAGTTAGTTATGGGATTGTAA

Upstream 100 bases:

>100_bases
TTCGTATTTAGAATAATTTCTTTCCTATGTCATGTCGTTTATCCACGGCATGACATAGTAGGTTTACCTGTGCATATAAC
AATATCTATCAATGATATTC

Downstream 100 bases:

>100_bases
GACTCATTGTGAGCAGTACCTAATCCGTCATTGCGAGTGACCGTAGGGAGCGTGGCAATCTGAGGACTTTGGTACGAGAT
TGCAATGACGGCTGTTATAA

Product: microcin C7 self-immunity protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MILKNLSLLIILFFSISAFSAATNLKNIHITVVAPATGADNKTLSDLKNINGLNLQIHSKCFSKGKLPFLASSDEVRFNC
LRDALFDESDNIVWSLRGGYGSARIIPGLLKLPKPNREKFFIGYSDITALHLFLSQEWGWKTIHGSNIADLLKTDKDHSN
FIKLAEILKGHVKQVNIENLVPLNNIAKSSDLVNGKLTGGNLTMVQTSIGTSWQIKTKGKILFLEDVNVAPFRLDRELLH
LKQAGLLEDVKAIIFGSFGKDLDATMLVLRNFADHLNIPVFKTNRFGHEKINDPIIYNTDSKIVMGKNKGFKLVMGL

Sequences:

>Translated_317_residues
MILKNLSLLIILFFSISAFSAATNLKNIHITVVAPATGADNKTLSDLKNINGLNLQIHSKCFSKGKLPFLASSDEVRFNC
LRDALFDESDNIVWSLRGGYGSARIIPGLLKLPKPNREKFFIGYSDITALHLFLSQEWGWKTIHGSNIADLLKTDKDHSN
FIKLAEILKGHVKQVNIENLVPLNNIAKSSDLVNGKLTGGNLTMVQTSIGTSWQIKTKGKILFLEDVNVAPFRLDRELLH
LKQAGLLEDVKAIIFGSFGKDLDATMLVLRNFADHLNIPVFKTNRFGHEKINDPIIYNTDSKIVMGKNKGFKLVMGL
>Mature_317_residues
MILKNLSLLIILFFSISAFSAATNLKNIHITVVAPATGADNKTLSDLKNINGLNLQIHSKCFSKGKLPFLASSDEVRFNC
LRDALFDESDNIVWSLRGGYGSARIIPGLLKLPKPNREKFFIGYSDITALHLFLSQEWGWKTIHGSNIADLLKTDKDHSN
FIKLAEILKGHVKQVNIENLVPLNNIAKSSDLVNGKLTGGNLTMVQTSIGTSWQIKTKGKILFLEDVNVAPFRLDRELLH
LKQAGLLEDVKAIIFGSFGKDLDATMLVLRNFADHLNIPVFKTNRFGHEKINDPIIYNTDSKIVMGKNKGFKLVMGL

Specific function: L,D-carboxypeptidase [C]

COG id: COG1619

COG function: function code V; Uncharacterized proteins, homologs of microcin C7 resistance protein MccF

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S66 family [H]

Homologues:

Organism=Escherichia coli, GI1787441, Length=226, Percent_Identity=30.9734513274336, Blast_Score=86, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003507 [H]

Pfam domain/function: PF02016 Peptidase_S66 [H]

EC number: NA

Molecular weight: Translated: 35241; Mature: 35241

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILKNLSLLIILFFSISAFSAATNLKNIHITVVAPATGADNKTLSDLKNINGLNLQIHSK
CCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCHHHHHHCCCCCEEEEEHH
CFSKGKLPFLASSDEVRFNCLRDALFDESDNIVWSLRGGYGSARIIPGLLKLPKPNREKF
HHCCCCCCEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCCHHHCCHHHCCCCCCCCEE
FIGYSDITALHLFLSQEWGWKTIHGSNIADLLKTDKDHSNFIKLAEILKGHVKQVNIENL
EEEEHHHHHHEEEHHCCCCCEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHEECHHHC
VPLNNIAKSSDLVNGKLTGGNLTMVQTSIGTSWQIKTKGKILFLEDVNVAPFRLDRELLH
CCCHHHCCCCCCCCCEEECCEEEEEEECCCCEEEEEECCEEEEEECCCCCCCHHHHHHHH
LKQAGLLEDVKAIIFGSFGKDLDATMLVLRNFADHLNIPVFKTNRFGHEKINDPIIYNTD
HHHCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCHHCCCCEEEECC
SKIVMGKNKGFKLVMGL
CEEEEECCCCEEEEEEC
>Mature Secondary Structure
MILKNLSLLIILFFSISAFSAATNLKNIHITVVAPATGADNKTLSDLKNINGLNLQIHSK
CCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCHHHHHHCCCCCEEEEEHH
CFSKGKLPFLASSDEVRFNCLRDALFDESDNIVWSLRGGYGSARIIPGLLKLPKPNREKF
HHCCCCCCEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCCHHHCCHHHCCCCCCCCEE
FIGYSDITALHLFLSQEWGWKTIHGSNIADLLKTDKDHSNFIKLAEILKGHVKQVNIENL
EEEEHHHHHHEEEHHCCCCCEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHEECHHHC
VPLNNIAKSSDLVNGKLTGGNLTMVQTSIGTSWQIKTKGKILFLEDVNVAPFRLDRELLH
CCCHHHCCCCCCCCCEEECCEEEEEEECCCCEEEEEECCEEEEEECCCCCCCHHHHHHHH
LKQAGLLEDVKAIIFGSFGKDLDATMLVLRNFADHLNIPVFKTNRFGHEKINDPIIYNTD
HHHCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCHHCCCCEEEECC
SKIVMGKNKGFKLVMGL
CEEEEECCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]