Definition | Rickettsia akari str. Hartford, complete genome. |
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Accession | NC_009881 |
Length | 1,231,060 |
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The map label for this gene is 157825605
Identifier: 157825605
GI number: 157825605
Start: 470445
End: 472937
Strand: Reverse
Name: 157825605
Synonym: A1C_02600
Alternate gene names: NA
Gene position: 472937-470445 (Counterclockwise)
Preceding gene: 157825607
Following gene: 157825601
Centisome position: 38.42
GC content: 29.8
Gene sequence:
>2493_bases ATGCCTAAAAATTTAAAATACTCACTTATTATATTTACAAGTATAATATTGTTATTGGTTGTTATGCCTTTCTTTATTCC TTTAGATAATTATAAAGGAGTAATAATAGATAAAGTTAAAGAGGTTACAAATAGAGATTTAACTATTAACGGCAATATAA AATTATCTTTACTACCGAATCCCGCAATATCTCTCTCAGAAATTAAATTATCATCAATAAACGGTACAAAAGACCCTCAT CTAGTTTCCGTTGAAAGTGCTAAAGCATCATTGCGGCTTTTTCCTCTTTTTAGAGGAGCAATTGAAGTAGCTTCTATAGA GTTGCAAAAACCGATTATAAATCTAGAAGTCTTGAATAACGGACAAAAAAATTGGCTGTTTGATACATCTAATAATAAGC CTAAAAAAAATCATTTTAGTTATGCAGAATCTACTAATACTAAAAGTGAATTAGAACTTCCAATTTTGATTAGTCATTTT AAAATTATAGACGGTAAAGTAATATATATAGAAAAAAATAGTGAGAAAATATTGAACGATATTAATTTAGAGACTAAAAT TAAAAGCCTTAAAGGTCCTATAGATTTTACTTTAGCTTTAAGTGCTTTGCAGCAGCAGATTAATATAGATGGAAATATTG AAGAACTCAGACCAATAATTCCGTTAAGTGCTAATATTAATCTTGCCAGTGAAAAAATTAAAATCGAAGGAAATTTTGAT AGTGAAAATAATTCTTTTATAGGTAAAGCAAATATTAAAGGTAATACTAAAACTTTAGCTATGCCTGCTTATTTACAAAA TGACTACGAGCTAACTACGGCAATTACTGCCGATAATAAAAATGTAACTATTAAAGATGCTAGACTTAATTATACAAATA TAGAATTACTAGCAAATGCAAATTATGATATAGAGCGTAATAACCTAAAATCAAATATCATTGTAAATCCAGGTAACATT ATAACCGAACTTAGCTCTAATTTAGATAAGACAAATATTATACTACAAGCTGATAGTTTAAAACCTATACTTGATGCTTT AAAGCTAAAGATCGATAAATTACCTCCTATTATTAACCAAAAACTTATGCTGACTTCTAATGTAATTAGTAATTCTCAAA CAATAAAATTACAAAATATTAGTTTATCGGTTGCAAATAGTAATTTAACCGGAGATATTGAGCTTAAAAACTTGGCTCAA GATATAACTATTTCTCATAATCTAAAAATTAATAATTTTGAGTCGTTTATGTCTCTTATGGGAGTAAGTAATTTAAGCAA GATTGGAGTATTGCAGTTAAACGGGGAAGTACAAAAAGTTAAAGATACTTTCCATATTAATAATAAAATATCTGCTTTTA ATACTAATATATCTATTAAAGGTGCTATCAATTTAGCAGCCCAGAAACCGAATTTCAATCTTAACTTATACAGTCCGTTA GTTAATTTGGATAAAATTCTTGCAAGCCACAGCCCTACTCCTGTTTTAAATCAAACTAGTAATCATGCTAATCAAAATAT AGCTACAGCTAAAAATAATTCTCCTTGGTCAAACAATCCTATTAACTTGGGGTTTTTAAATGAAATTGAAGGACAATTAT CCGCAAATATTGATAAATTAACTAACGACTCATTAATCATAAATAATTTAAAAGCAAAATTAAATATCATCGGCGGTCAG TTAAATATTACTTCAGTTAATGCAAGCATTTACGGTGGTGAACTAAGTAGCACTGGTTATGTGAGTTCAGGAAAAGAGCA AGACGCTGCAATCAAAATCGATTTTAAAAATGCCTGCCTCAAAAGTTTAACTCCACAATCAGGTAAAATAAAAATAACTG ATGGGCGACTAAGCTTTAAAGCCGATCTTACTGCTCGCGGTAATAGCATTTATACATATGTTAATAATCTAAATGGACAA TTTAACGTAAATAGCGATAACGGGAAAATAAGCGGATTTGATTTAAACCGAATCGCAGATGCGGTGGGTAATGCTAAAAA TACCGAAGGAGTATTACGACTTATTAACAGTTCGTTTAACGGAGGGTCCACATCTTTCAAAAATTTAATTGCCAGTGGAA ATATAACGCAAGGCAAACTTAATTTAAATGAATGTAGTTTAGATGCTTCACCTGCGAAAGCAAAGGCAAACGGTCAAATT AACTTACCGCAATATATGATGGATATTAGTGCAAGCGTTACTATTGCGGACTTACCACCTATAGCTGTTAAATTATACGG ATTTATAAATAATCCGCAGCATAAGCTAGATATTCAGGCTCTTCAAACTTATTTAGTGAACAACGTATTTAATAGCGTTA TTAAAGATCTAAAAAGCGGTGAGAAAAAACCTGAAAATATTATTAAAGATGCTTTAGGTCTTAGCAAGAAAAAAGATACA AATGCAGAGGAACAAAGTAGCTCTCAGCATGAAAACAAACAAGCAGATCCTGTAAATAAACTACTACACAAAGGATTGAA AAAACTGTTTTGA
Upstream 100 bases:
>100_bases TGACATCGGGTAATACTTAATTAAGTAAATTATATGAATTTGACAATTAAGTCTTAGATACTATAATCAATATATGTACA TAAGCAGAAGGTTAAACTCT
Downstream 100 bases:
>100_bases TATGACAATCACGGGTGTTGTTTGACTTATTATCCCTCTATGTGATCCCGTGTGTGTAACTAAATATTTTTAGATAAGTC TCATTTATTTTGCTTTGTTG
Product: outer membrane assembly protein
Products: NA
Alternate protein names: Outer Membrane Assembly Protein; AsmA Family; Outer Membrane Assembly Protein AsmA; AsmA Protein
Number of amino acids: Translated: 830; Mature: 829
Protein sequence:
>830_residues MPKNLKYSLIIFTSIILLLVVMPFFIPLDNYKGVIIDKVKEVTNRDLTINGNIKLSLLPNPAISLSEIKLSSINGTKDPH LVSVESAKASLRLFPLFRGAIEVASIELQKPIINLEVLNNGQKNWLFDTSNNKPKKNHFSYAESTNTKSELELPILISHF KIIDGKVIYIEKNSEKILNDINLETKIKSLKGPIDFTLALSALQQQINIDGNIEELRPIIPLSANINLASEKIKIEGNFD SENNSFIGKANIKGNTKTLAMPAYLQNDYELTTAITADNKNVTIKDARLNYTNIELLANANYDIERNNLKSNIIVNPGNI ITELSSNLDKTNIILQADSLKPILDALKLKIDKLPPIINQKLMLTSNVISNSQTIKLQNISLSVANSNLTGDIELKNLAQ DITISHNLKINNFESFMSLMGVSNLSKIGVLQLNGEVQKVKDTFHINNKISAFNTNISIKGAINLAAQKPNFNLNLYSPL VNLDKILASHSPTPVLNQTSNHANQNIATAKNNSPWSNNPINLGFLNEIEGQLSANIDKLTNDSLIINNLKAKLNIIGGQ LNITSVNASIYGGELSSTGYVSSGKEQDAAIKIDFKNACLKSLTPQSGKIKITDGRLSFKADLTARGNSIYTYVNNLNGQ FNVNSDNGKISGFDLNRIADAVGNAKNTEGVLRLINSSFNGGSTSFKNLIASGNITQGKLNLNECSLDASPAKAKANGQI NLPQYMMDISASVTIADLPPIAVKLYGFINNPQHKLDIQALQTYLVNNVFNSVIKDLKSGEKKPENIIKDALGLSKKKDT NAEEQSSSQHENKQADPVNKLLHKGLKKLF
Sequences:
>Translated_830_residues MPKNLKYSLIIFTSIILLLVVMPFFIPLDNYKGVIIDKVKEVTNRDLTINGNIKLSLLPNPAISLSEIKLSSINGTKDPH LVSVESAKASLRLFPLFRGAIEVASIELQKPIINLEVLNNGQKNWLFDTSNNKPKKNHFSYAESTNTKSELELPILISHF KIIDGKVIYIEKNSEKILNDINLETKIKSLKGPIDFTLALSALQQQINIDGNIEELRPIIPLSANINLASEKIKIEGNFD SENNSFIGKANIKGNTKTLAMPAYLQNDYELTTAITADNKNVTIKDARLNYTNIELLANANYDIERNNLKSNIIVNPGNI ITELSSNLDKTNIILQADSLKPILDALKLKIDKLPPIINQKLMLTSNVISNSQTIKLQNISLSVANSNLTGDIELKNLAQ DITISHNLKINNFESFMSLMGVSNLSKIGVLQLNGEVQKVKDTFHINNKISAFNTNISIKGAINLAAQKPNFNLNLYSPL VNLDKILASHSPTPVLNQTSNHANQNIATAKNNSPWSNNPINLGFLNEIEGQLSANIDKLTNDSLIINNLKAKLNIIGGQ LNITSVNASIYGGELSSTGYVSSGKEQDAAIKIDFKNACLKSLTPQSGKIKITDGRLSFKADLTARGNSIYTYVNNLNGQ FNVNSDNGKISGFDLNRIADAVGNAKNTEGVLRLINSSFNGGSTSFKNLIASGNITQGKLNLNECSLDASPAKAKANGQI NLPQYMMDISASVTIADLPPIAVKLYGFINNPQHKLDIQALQTYLVNNVFNSVIKDLKSGEKKPENIIKDALGLSKKKDT NAEEQSSSQHENKQADPVNKLLHKGLKKLF >Mature_829_residues PKNLKYSLIIFTSIILLLVVMPFFIPLDNYKGVIIDKVKEVTNRDLTINGNIKLSLLPNPAISLSEIKLSSINGTKDPHL VSVESAKASLRLFPLFRGAIEVASIELQKPIINLEVLNNGQKNWLFDTSNNKPKKNHFSYAESTNTKSELELPILISHFK IIDGKVIYIEKNSEKILNDINLETKIKSLKGPIDFTLALSALQQQINIDGNIEELRPIIPLSANINLASEKIKIEGNFDS ENNSFIGKANIKGNTKTLAMPAYLQNDYELTTAITADNKNVTIKDARLNYTNIELLANANYDIERNNLKSNIIVNPGNII TELSSNLDKTNIILQADSLKPILDALKLKIDKLPPIINQKLMLTSNVISNSQTIKLQNISLSVANSNLTGDIELKNLAQD ITISHNLKINNFESFMSLMGVSNLSKIGVLQLNGEVQKVKDTFHINNKISAFNTNISIKGAINLAAQKPNFNLNLYSPLV NLDKILASHSPTPVLNQTSNHANQNIATAKNNSPWSNNPINLGFLNEIEGQLSANIDKLTNDSLIINNLKAKLNIIGGQL NITSVNASIYGGELSSTGYVSSGKEQDAAIKIDFKNACLKSLTPQSGKIKITDGRLSFKADLTARGNSIYTYVNNLNGQF NVNSDNGKISGFDLNRIADAVGNAKNTEGVLRLINSSFNGGSTSFKNLIASGNITQGKLNLNECSLDASPAKAKANGQIN LPQYMMDISASVTIADLPPIAVKLYGFINNPQHKLDIQALQTYLVNNVFNSVIKDLKSGEKKPENIIKDALGLSKKKDTN AEEQSSSQHENKQADPVNKLLHKGLKKLF
Specific function: Unknown
COG id: COG2982
COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90934; Mature: 90803
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKNLKYSLIIFTSIILLLVVMPFFIPLDNYKGVIIDKVKEVTNRDLTINGNIKLSLLPN CCCCCEEHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHCCCCEEEECCEEEEECCC PAISLSEIKLSSINGTKDPHLVSVESAKASLRLFPLFRGAIEVASIELQKPIINLEVLNN CCCEEEEEEEECCCCCCCCEEEEEECCCCEEEEEEHHHCCEEEEEEEECCCEEEEEEECC GQKNWLFDTSNNKPKKNHFSYAESTNTKSELELPILISHFKIIDGKVIYIEKNSEKILND CCCCEEEECCCCCCCCCCCCCCCCCCCHHHEEEEEEEEEEEEECCEEEEEECCCHHHHHH INLETKIKSLKGPIDFTLALSALQQQINIDGNIEELRPIIPLSANINLASEKIKIEGNFD CCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHCCEEEECCCCEEECEEEEEEECCC SENNSFIGKANIKGNTKTLAMPAYLQNDYELTTAITADNKNVTIKDARLNYTNIELLANA CCCCCEEEEEECCCCCEEEEEHHHHCCCEEEEEEEEECCCEEEEEECEECEEEEEEEECC NYDIERNNLKSNIIVNPGNIITELSSNLDKTNIILQADSLKPILDALKLKIDKLPPIINQ CCCEECCCCCCEEEECCCHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCC KLMLTSNVISNSQTIKLQNISLSVANSNLTGDIELKNLAQDITISHNLKINNFESFMSLM EEEEEHHHCCCCCEEEEEEEEEEEECCCCCCEEEHHHHHCCEEEEECEEECCHHHHHHHH GVSNLSKIGVLQLNGEVQKVKDTFHINNKISAFNTNISIKGAINLAAQKPNFNLNLYSPL CCCCCCCEEEEEECCCCEEEEHEEEECCEEEEEECCEEEEEEEEEEEECCCCCEEEECCH VNLDKILASHSPTPVLNQTSNHANQNIATAKNNSPWSNNPINLGFLNEIEGQLSANIDKL HHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEHHHCCCHHHCCHHHC TNDSLIINNLKAKLNIIGGQLNITSVNASIYGGELSSTGYVSSGKEQDAAIKIDFKNACL CCCCEEEECCEEEEEEECCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEHHHHH KSLTPQSGKIKITDGRLSFKADLTARGNSIYTYVNNLNGQFNVNSDNGKISGFDLNRIAD HHCCCCCCEEEEECCCEEEEEEEEECCCEEEEEEECCCCEEEEECCCCEEECEEHHHHHH AVGNAKNTEGVLRLINSSFNGGSTSFKNLIASGNITQGKLNLNECSLDASPAKAKANGQI HHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCEEECEEECCCCCCCCCCCCCCCCCCC NLPQYMMDISASVTIADLPPIAVKLYGFINNPQHKLDIQALQTYLVNNVFNSVIKDLKSG CCHHHHHHCCCEEEEECCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC EKKPENIIKDALGLSKKKDTNAEEQSSSQHENKQADPVNKLLHKGLKKLF CCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure PKNLKYSLIIFTSIILLLVVMPFFIPLDNYKGVIIDKVKEVTNRDLTINGNIKLSLLPN CCCCEEHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHCCCCEEEECCEEEEECCC PAISLSEIKLSSINGTKDPHLVSVESAKASLRLFPLFRGAIEVASIELQKPIINLEVLNN CCCEEEEEEEECCCCCCCCEEEEEECCCCEEEEEEHHHCCEEEEEEEECCCEEEEEEECC GQKNWLFDTSNNKPKKNHFSYAESTNTKSELELPILISHFKIIDGKVIYIEKNSEKILND CCCCEEEECCCCCCCCCCCCCCCCCCCHHHEEEEEEEEEEEEECCEEEEEECCCHHHHHH INLETKIKSLKGPIDFTLALSALQQQINIDGNIEELRPIIPLSANINLASEKIKIEGNFD CCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHCCEEEECCCCEEECEEEEEEECCC SENNSFIGKANIKGNTKTLAMPAYLQNDYELTTAITADNKNVTIKDARLNYTNIELLANA CCCCCEEEEEECCCCCEEEEEHHHHCCCEEEEEEEEECCCEEEEEECEECEEEEEEEECC NYDIERNNLKSNIIVNPGNIITELSSNLDKTNIILQADSLKPILDALKLKIDKLPPIINQ CCCEECCCCCCEEEECCCHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCC KLMLTSNVISNSQTIKLQNISLSVANSNLTGDIELKNLAQDITISHNLKINNFESFMSLM EEEEEHHHCCCCCEEEEEEEEEEEECCCCCCEEEHHHHHCCEEEEECEEECCHHHHHHHH GVSNLSKIGVLQLNGEVQKVKDTFHINNKISAFNTNISIKGAINLAAQKPNFNLNLYSPL CCCCCCCEEEEEECCCCEEEEHEEEECCEEEEEECCEEEEEEEEEEEECCCCCEEEECCH VNLDKILASHSPTPVLNQTSNHANQNIATAKNNSPWSNNPINLGFLNEIEGQLSANIDKL HHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEHHHCCCHHHCCHHHC TNDSLIINNLKAKLNIIGGQLNITSVNASIYGGELSSTGYVSSGKEQDAAIKIDFKNACL CCCCEEEECCEEEEEEECCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEHHHHH KSLTPQSGKIKITDGRLSFKADLTARGNSIYTYVNNLNGQFNVNSDNGKISGFDLNRIAD HHCCCCCCEEEEECCCEEEEEEEEECCCEEEEEEECCCCEEEEECCCCEEECEEHHHHHH AVGNAKNTEGVLRLINSSFNGGSTSFKNLIASGNITQGKLNLNECSLDASPAKAKANGQI HHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCEEECEEECCCCCCCCCCCCCCCCCCC NLPQYMMDISASVTIADLPPIAVKLYGFINNPQHKLDIQALQTYLVNNVFNSVIKDLKSG CCHHHHHHCCCEEEEECCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC EKKPENIIKDALGLSKKKDTNAEEQSSSQHENKQADPVNKLLHKGLKKLF CCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA