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The map label for this gene is 157825600

Identifier: 157825600

GI number: 157825600

Start: 468248

End: 468667

Strand: Reverse

Name: 157825600

Synonym: A1C_02575

Alternate gene names: NA

Gene position: 468667-468248 (Counterclockwise)

Preceding gene: 157825601

Following gene: 157825598

Centisome position: 38.07

GC content: 31.19

Gene sequence:

>420_bases
TTGCTAAAGATATTTAATTTCTTTAAAGAACACCCACGTGCTAAAGCAACTTTTGCTACTAAATATGTTAATCCTAAACT
GCTTAATTTTAATCCTGACGGCAAAATAAGAATTAGATTTAGCTTGATGCCGGCGAGGATAAGTGCGATATTAGAGCCAA
AGACGAGTCCAATTATCCAAAGAGTAAAAGCGTTAAATATTTTTATTGAAGCATGTTACGAAGTTCATCTAAACTTTGCT
CCTATTATTGCTTATGAAGGATGGCTTATCGAATATGAAAAGCTATTTGAAGATTTAGATCCATACATAAACAACCAATA
TAAACCGTTTATAAAAGCGGAATACATATTTACGTATAACGATAAGCAGCATGAAAGAAATATTGCTGAAAATAGATTAG
AGAATGAAGCTTTAATTTGA

Upstream 100 bases:

>100_bases
TTTACCGACTAAAATTTCCAATCAAACAGATTCTAAATATTGGACATAATATGATATAGGTTGTTCTACCGATGTAAGTT
TGCATTGGAAACACACTAAT

Downstream 100 bases:

>100_bases
TAACCAAATGTACAGGAAAATAGAGTAAGTGCATATTGAGGCAAGACTGTACATTATAAAGCCTGTATTAAGAGTAATTT
TATCCAATGATGGAGTGTGT

Product: putative lyase

Products: NA

Alternate protein names: Radical SAM Domain Protein; Radical SAM; DNA Repair Photolyase; Radical Sam Domain Protein

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MLKIFNFFKEHPRAKATFATKYVNPKLLNFNPDGKIRIRFSLMPARISAILEPKTSPIIQRVKALNIFIEACYEVHLNFA
PIIAYEGWLIEYEKLFEDLDPYINNQYKPFIKAEYIFTYNDKQHERNIAENRLENEALI

Sequences:

>Translated_139_residues
MLKIFNFFKEHPRAKATFATKYVNPKLLNFNPDGKIRIRFSLMPARISAILEPKTSPIIQRVKALNIFIEACYEVHLNFA
PIIAYEGWLIEYEKLFEDLDPYINNQYKPFIKAEYIFTYNDKQHERNIAENRLENEALI
>Mature_139_residues
MLKIFNFFKEHPRAKATFATKYVNPKLLNFNPDGKIRIRFSLMPARISAILEPKTSPIIQRVKALNIFIEACYEVHLNFA
PIIAYEGWLIEYEKLFEDLDPYINNQYKPFIKAEYIFTYNDKQHERNIAENRLENEALI

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16515; Mature: 16515

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKIFNFFKEHPRAKATFATKYVNPKLLNFNPDGKIRIRFSLMPARISAILEPKTSPIIQ
CCHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCEEEEEEEECHHHHHHHCCCCCCHHHH
RVKALNIFIEACYEVHLNFAPIIAYEGWLIEYEKLFEDLDPYINNQYKPFIKAEYIFTYN
HHHHHHHHHHHHHHHHCCCEEEEEECCEEEHHHHHHHHHCHHHCCCCCCEEEEEEEEEEC
DKQHERNIAENRLENEALI
CCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLKIFNFFKEHPRAKATFATKYVNPKLLNFNPDGKIRIRFSLMPARISAILEPKTSPIIQ
CCHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCEEEEEEEECHHHHHHHCCCCCCHHHH
RVKALNIFIEACYEVHLNFAPIIAYEGWLIEYEKLFEDLDPYINNQYKPFIKAEYIFTYN
HHHHHHHHHHHHHHHHCCCEEEEEECCEEEHHHHHHHHHCHHHCCCCCCEEEEEEEEEEC
DKQHERNIAENRLENEALI
CCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA