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The map label for this gene is yhcM [H]

Identifier: 157825415

GI number: 157825415

Start: 292449

End: 293501

Strand: Reverse

Name: yhcM [H]

Synonym: A1C_01580

Alternate gene names: 157825415

Gene position: 293501-292449 (Counterclockwise)

Preceding gene: 157825416

Following gene: 157825410

Centisome position: 23.84

GC content: 28.11

Gene sequence:

>1053_bases
ATGATTAAATCCTATACTTCATTAATACTAGATTCAAAACAAGCTGCTTTATTAGAAGCATTAAAACAGCTGGCATCAGA
ACTTAATAAGCCTAAAAGTTTATTCAAATTCTTTAATCAAAACAACTTAAAAAGCGGAATTTATTTATACGGTCCGGTTG
GCAGCGGTAAAACTATGCTCATGAATTCTTTTTTTGAAGAATTAGCCACATCTAAAATAATAACACACTATCAGAACTTT
ATGCAAGAAGTACATAAATCTATGCATAAATTACAGATAGAAAATCAAAAAGATATCATCCTTAAAATTGCAAAAGATTG
TGCTAAACAAACTAGAGTACTTGGAATAGATGAATTTGAAATTAAAGACATTACAGATGCAATGATAATCGGTAGATTAT
TTAATGCATTAATAAAGCAAAATATTTTTATTTTTATAACCTCTAACACGAGTCCCAATAATCTTTACAAAGACGGATTA
CAACGAGAATCTTTCGTACCTTTTATAAAGATAATCAATAATACATTTTATGTTAAATATCTAGATAATCACCATGATTA
TCGATTTGATAAAGCTTTAGGAGTTAAAGGAGAAAGGATAATTTATCCATTAACTTTAGAACACCAAAACAAACTTGAAA
AAATTATCACGGAGATTAGTGATAATAAGCTTGTTGCTCAAAATATACAGGTTCTAGGTAGAGAAATATCCTTTCAAAAA
GTGTATAAACGAATATTAGTAACAGATTACAATGAATTATTTACAAGAGACTTAAGCTATATCGATTATGTTAATATTTG
TCAAAATTTCAATGTTGTTATAGTGAAGAACGTTCATACTATCGATGCTAACGATACAAATACAGCCGTTAGATTTATCA
ACTTTATCGATAATGCATATTTCTATAAAATCCTTTTATTTATGAGCTTAGAAGATAAGCCGAGTAAAATATATCAAGGT
TCAGCACGCGCCGCAGAATTCAAACGCACTATTTCAAGACTAAATGGAATGAATAGCGAATCTTATTTATTAAACAATGA
TTTTAAGCATTAA

Upstream 100 bases:

>100_bases
CATGGATGAAATTGATCCACACAACACACTCTTCCTGCTTTTAGCTAAGAACGACATTTTAGAAAAAAATATATAACAAC
TTAGAGAAAAAATATTTTGG

Downstream 100 bases:

>100_bases
CTTTCTTAAGAGCTTGAAATATAAATATTATTCTTTCAAAAATCTTATCAATTTTCTCTCAAAAAGCTCTTTAATTACTC
ATTAAAATTTATTTACAGAT

Product: putative ATPase n2B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MIKSYTSLILDSKQAALLEALKQLASELNKPKSLFKFFNQNNLKSGIYLYGPVGSGKTMLMNSFFEELATSKIITHYQNF
MQEVHKSMHKLQIENQKDIILKIAKDCAKQTRVLGIDEFEIKDITDAMIIGRLFNALIKQNIFIFITSNTSPNNLYKDGL
QRESFVPFIKIINNTFYVKYLDNHHDYRFDKALGVKGERIIYPLTLEHQNKLEKIITEISDNKLVAQNIQVLGREISFQK
VYKRILVTDYNELFTRDLSYIDYVNICQNFNVVIVKNVHTIDANDTNTAVRFINFIDNAYFYKILLFMSLEDKPSKIYQG
SARAAEFKRTISRLNGMNSESYLLNNDFKH

Sequences:

>Translated_350_residues
MIKSYTSLILDSKQAALLEALKQLASELNKPKSLFKFFNQNNLKSGIYLYGPVGSGKTMLMNSFFEELATSKIITHYQNF
MQEVHKSMHKLQIENQKDIILKIAKDCAKQTRVLGIDEFEIKDITDAMIIGRLFNALIKQNIFIFITSNTSPNNLYKDGL
QRESFVPFIKIINNTFYVKYLDNHHDYRFDKALGVKGERIIYPLTLEHQNKLEKIITEISDNKLVAQNIQVLGREISFQK
VYKRILVTDYNELFTRDLSYIDYVNICQNFNVVIVKNVHTIDANDTNTAVRFINFIDNAYFYKILLFMSLEDKPSKIYQG
SARAAEFKRTISRLNGMNSESYLLNNDFKH
>Mature_350_residues
MIKSYTSLILDSKQAALLEALKQLASELNKPKSLFKFFNQNNLKSGIYLYGPVGSGKTMLMNSFFEELATSKIITHYQNF
MQEVHKSMHKLQIENQKDIILKIAKDCAKQTRVLGIDEFEIKDITDAMIIGRLFNALIKQNIFIFITSNTSPNNLYKDGL
QRESFVPFIKIINNTFYVKYLDNHHDYRFDKALGVKGERIIYPLTLEHQNKLEKIITEISDNKLVAQNIQVLGREISFQK
VYKRILVTDYNELFTRDLSYIDYVNICQNFNVVIVKNVHTIDANDTNTAVRFINFIDNAYFYKILLFMSLEDKPSKIYQG
SARAAEFKRTISRLNGMNSESYLLNNDFKH

Specific function: Unknown

COG id: COG1485

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AFG1 ATPase family [H]

Homologues:

Organism=Homo sapiens, GI21918872, Length=393, Percent_Identity=30.0254452926209, Blast_Score=167, Evalue=1e-41,
Organism=Escherichia coli, GI1789627, Length=300, Percent_Identity=33, Blast_Score=152, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI17505769, Length=344, Percent_Identity=30.2325581395349, Blast_Score=160, Evalue=7e-40,
Organism=Saccharomyces cerevisiae, GI6320783, Length=329, Percent_Identity=28.8753799392097, Blast_Score=129, Evalue=6e-31,
Organism=Drosophila melanogaster, GI20129913, Length=348, Percent_Identity=27.2988505747126, Blast_Score=135, Evalue=5e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005654 [H]

Pfam domain/function: PF03969 AFG1_ATPase [H]

EC number: NA

Molecular weight: Translated: 40690; Mature: 40690

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKSYTSLILDSKQAALLEALKQLASELNKPKSLFKFFNQNNLKSGIYLYGPVGSGKTML
CCCHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEECCCCCHHHH
MNSFFEELATSKIITHYQNFMQEVHKSMHKLQIENQKDIILKIAKDCAKQTRVLGIDEFE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCH
IKDITDAMIIGRLFNALIKQNIFIFITSNTSPNNLYKDGLQRESFVPFIKIINNTFYVKY
HHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHCCCCCHHHHHHHHHCCEEEEEE
LDNHHDYRFDKALGVKGERIIYPLTLEHQNKLEKIITEISDNKLVAQNIQVLGREISFQK
ECCCCCCCHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHH
VYKRILVTDYNELFTRDLSYIDYVNICQNFNVVIVKNVHTIDANDTNTAVRFINFIDNAY
HHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHH
FYKILLFMSLEDKPSKIYQGSARAAEFKRTISRLNGMNSESYLLNNDFKH
HHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCC
>Mature Secondary Structure
MIKSYTSLILDSKQAALLEALKQLASELNKPKSLFKFFNQNNLKSGIYLYGPVGSGKTML
CCCHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEEECCCCCHHHH
MNSFFEELATSKIITHYQNFMQEVHKSMHKLQIENQKDIILKIAKDCAKQTRVLGIDEFE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCH
IKDITDAMIIGRLFNALIKQNIFIFITSNTSPNNLYKDGLQRESFVPFIKIINNTFYVKY
HHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHCCCCCHHHHHHHHHCCEEEEEE
LDNHHDYRFDKALGVKGERIIYPLTLEHQNKLEKIITEISDNKLVAQNIQVLGREISFQK
ECCCCCCCHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHH
VYKRILVTDYNELFTRDLSYIDYVNICQNFNVVIVKNVHTIDANDTNTAVRFINFIDNAY
HHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHH
FYKILLFMSLEDKPSKIYQGSARAAEFKRTISRLNGMNSESYLLNNDFKH
HHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]