| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157825382
Identifier: 157825382
GI number: 157825382
Start: 260562
End: 261182
Strand: Reverse
Name: 157825382
Synonym: A1C_01380
Alternate gene names: NA
Gene position: 261182-260562 (Counterclockwise)
Preceding gene: 157825384
Following gene: 157825379
Centisome position: 21.22
GC content: 28.34
Gene sequence:
>621_bases ATGTATATTACTTGCCCAAATTGCCAAACAAGATTTATTGTTACAAGCAATCAAATAGGTATTAACGGCCGACGAGTAAA ATGCTCCAAATGTAGCCATTCTTGGTATCAAAAACTAGACAACAACACTGCCACGTTAAACGATTTTAAAGATAAAGTCA ACACGGAAACTATTAAAAATCATTATAATGCTAATGTGCCAGTTATTTTACCGTATATTCCTAATAAGAAAAAATATAAT ATATTTCCAATATTATGGACTAGCTTTATAATTTTTGGTTTAGTGATATTACTAATAGATAGTTTTGAATTTTTAGGTAA CTATGATCAATTAAAGATAGAAGAAATTAATTTAGGAAAATCTCGCTATATAGGCGGTATGAAGATATTTTATAAAGTAT CTAATCAGTCTGATTATTTAATTTCTGATCCTATAATCAAAGTTAGAGTCATGGATAGTAATCATCAAGCTTTAGATGAA TATGCATCAATTACAAAACTACAAACAAACATCCCTGCAAAACAAGCAATATACCTAGAAATGAATATTGAAGGGATCCC TGTTACAGCAAAATATATTGATATTGCTATAGGTAATAGATTAGGGCTTTTATTTAAGTAA
Upstream 100 bases:
>100_bases TTAATAAGAGATGACATATCTTTTCACTGTTTTATTGCAAAAAATAATAAATAAGGCTATCATATGCATATGCAGTCAAA CATAATAATTATAATTAACT
Downstream 100 bases:
>100_bases AGACTGTTGCGTGGACCGATAAATGCTCTTTATATCATTCTTAGCTAAAAGCGAGAATCCAGAAAAAAGTATAAATACAG AAAATGTGTAAAACCACAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MYITCPNCQTRFIVTSNQIGINGRRVKCSKCSHSWYQKLDNNTATLNDFKDKVNTETIKNHYNANVPVILPYIPNKKKYN IFPILWTSFIIFGLVILLIDSFEFLGNYDQLKIEEINLGKSRYIGGMKIFYKVSNQSDYLISDPIIKVRVMDSNHQALDE YASITKLQTNIPAKQAIYLEMNIEGIPVTAKYIDIAIGNRLGLLFK
Sequences:
>Translated_206_residues MYITCPNCQTRFIVTSNQIGINGRRVKCSKCSHSWYQKLDNNTATLNDFKDKVNTETIKNHYNANVPVILPYIPNKKKYN IFPILWTSFIIFGLVILLIDSFEFLGNYDQLKIEEINLGKSRYIGGMKIFYKVSNQSDYLISDPIIKVRVMDSNHQALDE YASITKLQTNIPAKQAIYLEMNIEGIPVTAKYIDIAIGNRLGLLFK >Mature_206_residues MYITCPNCQTRFIVTSNQIGINGRRVKCSKCSHSWYQKLDNNTATLNDFKDKVNTETIKNHYNANVPVILPYIPNKKKYN IFPILWTSFIIFGLVILLIDSFEFLGNYDQLKIEEINLGKSRYIGGMKIFYKVSNQSDYLISDPIIKVRVMDSNHQALDE YASITKLQTNIPAKQAIYLEMNIEGIPVTAKYIDIAIGNRLGLLFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011723 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23671; Mature: 23671
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYITCPNCQTRFIVTSNQIGINGRRVKCSKCSHSWYQKLDNNTATLNDFKDKVNTETIKN CEEECCCCCEEEEEECCEECCCCCEEEEHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHH HYNANVPVILPYIPNKKKYNIFPILWTSFIIFGLVILLIDSFEFLGNYDQLKIEEINLGK HCCCCCCEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCH SRYIGGMKIFYKVSNQSDYLISDPIIKVRVMDSNHQALDEYASITKLQTNIPAKQAIYLE HHEECCEEEEEEECCCCCEEEECCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEE MNIEGIPVTAKYIDIAIGNRLGLLFK EECCCCEEEEEEEEEEECCEEEEEEC >Mature Secondary Structure MYITCPNCQTRFIVTSNQIGINGRRVKCSKCSHSWYQKLDNNTATLNDFKDKVNTETIKN CEEECCCCCEEEEEECCEECCCCCEEEEHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHH HYNANVPVILPYIPNKKKYNIFPILWTSFIIFGLVILLIDSFEFLGNYDQLKIEEINLGK HCCCCCCEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCH SRYIGGMKIFYKVSNQSDYLISDPIIKVRVMDSNHQALDEYASITKLQTNIPAKQAIYLE HHEECCEEEEEEECCCCCEEEECCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEE MNIEGIPVTAKYIDIAIGNRLGLLFK EECCCCEEEEEEEEEEECCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]