| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157825360
Identifier: 157825360
GI number: 157825360
Start: 236630
End: 236983
Strand: Reverse
Name: 157825360
Synonym: A1C_01270
Alternate gene names: NA
Gene position: 236983-236630 (Counterclockwise)
Preceding gene: 157825361
Following gene: 157825355
Centisome position: 19.25
GC content: 29.94
Gene sequence:
>354_bases TTGAGCTACCAAGATATCTTAATCGGGTGTAGTAATGAATTTACAGTAACAAGGGCAGATTCTTTTTCATGTAAAATATT AAGCAACAACATACCTTTATTAGTAGAATACGCTACCGGCTATTATAGCAGAATAACAATTGATGCTATTCCTGAAACAC AAAGAGCAGCAGGGTTTTTAAATAAAATTAGAGAAATTGTAGATCAAGAATCTATGCAAAACTATATATATGTTACTTCC GGTAATATTGTTGTATTAAGCAATAAAACGGTTGTACATAAAAGAGATAGCTATAGCCATAAATGGGATGGAAAAGACCA TTATTTTATTAGAATATATTCAGTGAAGATATAA
Upstream 100 bases:
>100_bases TAACTGATCTCTTATATTTTATTTAATTTTTGGGATTCTACATAAAGGACATGATAATCTAGCTATAATATATATTAGCC TTAAAGATATATTAAATCAA
Downstream 100 bases:
>100_bases ACCAAGGTATATTAGCAAATTCTGCTCAACCTTGGATATGGGTATAATAAATATGGCGATTGTATGGAAATCATATAAAA ACGTCGTGTGCAATGCCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MSYQDILIGCSNEFTVTRADSFSCKILSNNIPLLVEYATGYYSRITIDAIPETQRAAGFLNKIREIVDQESMQNYIYVTS GNIVVLSNKTVVHKRDSYSHKWDGKDHYFIRIYSVKI
Sequences:
>Translated_117_residues MSYQDILIGCSNEFTVTRADSFSCKILSNNIPLLVEYATGYYSRITIDAIPETQRAAGFLNKIREIVDQESMQNYIYVTS GNIVVLSNKTVVHKRDSYSHKWDGKDHYFIRIYSVKI >Mature_116_residues SYQDILIGCSNEFTVTRADSFSCKILSNNIPLLVEYATGYYSRITIDAIPETQRAAGFLNKIREIVDQESMQNYIYVTSG NIVVLSNKTVVHKRDSYSHKWDGKDHYFIRIYSVKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13481; Mature: 13350
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYQDILIGCSNEFTVTRADSFSCKILSNNIPLLVEYATGYYSRITIDAIPETQRAAGFL CCCCEEEEECCCCEEEEECCCEEEEEECCCCCEEEEECCCCEEEEEEECCCCCHHHHHHH NKIREIVDQESMQNYIYVTSGNIVVLSNKTVVHKRDSYSHKWDGKDHYFIRIYSVKI HHHHHHHCHHCCCCEEEEECCCEEEEECCEEEEECCCCCCCCCCCCEEEEEEEEEEC >Mature Secondary Structure SYQDILIGCSNEFTVTRADSFSCKILSNNIPLLVEYATGYYSRITIDAIPETQRAAGFL CCCEEEEECCCCEEEEECCCEEEEEECCCCCEEEEECCCCEEEEEEECCCCCHHHHHHH NKIREIVDQESMQNYIYVTSGNIVVLSNKTVVHKRDSYSHKWDGKDHYFIRIYSVKI HHHHHHHCHHCCCCEEEEECCCEEEEECCEEEEECCCCCCCCCCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA