| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157825351
Identifier: 157825351
GI number: 157825351
Start: 224058
End: 224318
Strand: Reverse
Name: 157825351
Synonym: A1C_01165
Alternate gene names: NA
Gene position: 224318-224058 (Counterclockwise)
Preceding gene: 157825353
Following gene: 157825350
Centisome position: 18.22
GC content: 36.78
Gene sequence:
>261_bases ATGACGAATGAAAAATATAATAATATATCAGAAGAAGACAATTTACAGCTAAATTCAGAAAGCTTCAGACAGGATGAATT TAAGAGTAAATCTACGGAGCGTACTTATGTCCGTGAGTACAGACTTAACTCCAAAAATTCGCCTGTATCAAGCTTTGTGA ATGACGCTGTACCAAAAGCAAAAGAAATCGGCGGTGTGAAAGGTCTAGAACCGACAAGATACGACGATTGGCAACATAAA GGTAAAGTCACTGATTTCTAA
Upstream 100 bases:
>100_bases CCGTTTTAACATAATGAACATGATCACTTGCTAATTCTATCTTGCTATTTTCAGCTAAACGACTATTAATATAAATACGA TTAAATCTCATATTATTACC
Downstream 100 bases:
>100_bases TATTATGGCATCATTTGAGCAAATTAAGGTTTTACCTTACCAACTGCAGAAATTGTTTGATTTGGTGTGGGATGTAGAGT CTTATCCTAAATTCTTACCT
Product: ABC-type multidrug transport system, ATPase and permease components
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MTNEKYNNISEEDNLQLNSESFRQDEFKSKSTERTYVREYRLNSKNSPVSSFVNDAVPKAKEIGGVKGLEPTRYDDWQHK GKVTDF
Sequences:
>Translated_86_residues MTNEKYNNISEEDNLQLNSESFRQDEFKSKSTERTYVREYRLNSKNSPVSSFVNDAVPKAKEIGGVKGLEPTRYDDWQHK GKVTDF >Mature_85_residues TNEKYNNISEEDNLQLNSESFRQDEFKSKSTERTYVREYRLNSKNSPVSSFVNDAVPKAKEIGGVKGLEPTRYDDWQHKG KVTDF
Specific function: Unknown
COG id: COG5508
COG function: function code S; Uncharacterized conserved small protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10023; Mature: 9892
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNEKYNNISEEDNLQLNSESFRQDEFKSKSTERTYVREYRLNSKNSPVSSFVNDAVPKA CCCCCCCCCCCCCCCEECCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCH KEIGGVKGLEPTRYDDWQHKGKVTDF HHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TNEKYNNISEEDNLQLNSESFRQDEFKSKSTERTYVREYRLNSKNSPVSSFVNDAVPKA CCCCCCCCCCCCCCEECCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCH KEIGGVKGLEPTRYDDWQHKGKVTDF HHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA