| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is yfjG [C]
Identifier: 157825350
GI number: 157825350
Start: 223613
End: 224053
Strand: Reverse
Name: yfjG [C]
Synonym: A1C_01160
Alternate gene names: 157825350
Gene position: 224053-223613 (Counterclockwise)
Preceding gene: 157825351
Following gene: 157825347
Centisome position: 18.2
GC content: 31.52
Gene sequence:
>441_bases ATGGCATCATTTGAGCAAATTAAGGTTTTACCTTACCAACTGCAGAAATTGTTTGATTTGGTGTGGGATGTAGAGTCTTA TCCTAAATTCTTACCTTGGTGTTCTGCTTCTAGAATCATTTCAGCAAACAATCAAGAGGTTATTGCTGAATTAGTAATTC AGTTAAAAGGCTTTTCAGAAAAATATAACTCACGAGTTACAAGCGAAATAACAGATGATGGAATATATTTGATTAATACG GTAGCTATTTCAGGACCTTTTGAATATTTAACAAGTACTTGGCAATTTGTTCCATGCACAGCAGGAACGGAATTAAAATT CTTTATTGATTTTAAAATGAAATCCGTAATACTGGATAAATTAATCGGCACTTATTTTAGCAAAGCAACCGAAAAAATGA TTATAGCTTTTGAAAAGAGAGCTAAAGAGGTTATTAAATAA
Upstream 100 bases:
>100_bases GCTGTACCAAAAGCAAAAGAAATCGGCGGTGTGAAAGGTCTAGAACCGACAAGATACGACGATTGGCAACATAAAGGTAA AGTCACTGATTTCTAATATT
Downstream 100 bases:
>100_bases AACAGAGTAATGTTATAGATCTATAACATTACTCTCTAGAAAATTTTGTATCTAGTGACTAGGCAATATCAGATATATAT CCTTCATCTCCCTCATCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MASFEQIKVLPYQLQKLFDLVWDVESYPKFLPWCSASRIISANNQEVIAELVIQLKGFSEKYNSRVTSEITDDGIYLINT VAISGPFEYLTSTWQFVPCTAGTELKFFIDFKMKSVILDKLIGTYFSKATEKMIIAFEKRAKEVIK
Sequences:
>Translated_146_residues MASFEQIKVLPYQLQKLFDLVWDVESYPKFLPWCSASRIISANNQEVIAELVIQLKGFSEKYNSRVTSEITDDGIYLINT VAISGPFEYLTSTWQFVPCTAGTELKFFIDFKMKSVILDKLIGTYFSKATEKMIIAFEKRAKEVIK >Mature_145_residues ASFEQIKVLPYQLQKLFDLVWDVESYPKFLPWCSASRIISANNQEVIAELVIQLKGFSEKYNSRVTSEITDDGIYLINTV AISGPFEYLTSTWQFVPCTAGTELKFFIDFKMKSVILDKLIGTYFSKATEKMIIAFEKRAKEVIK
Specific function: Unknown
COG id: COG2867
COG function: function code I; Oligoketide cyclase/lipid transport protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0083 family [H]
Homologues:
Organism=Homo sapiens, GI13376737, Length=143, Percent_Identity=30.0699300699301, Blast_Score=75, Evalue=2e-14, Organism=Homo sapiens, GI151101384, Length=148, Percent_Identity=25, Blast_Score=72, Evalue=2e-13, Organism=Homo sapiens, GI151101386, Length=148, Percent_Identity=25, Blast_Score=71, Evalue=3e-13, Organism=Escherichia coli, GI1788972, Length=145, Percent_Identity=31.0344827586207, Blast_Score=89, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005031 [H]
Pfam domain/function: PF03364 Polyketide_cyc [H]
EC number: NA
Molecular weight: Translated: 16786; Mature: 16654
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASFEQIKVLPYQLQKLFDLVWDVESYPKFLPWCSASRIISANNQEVIAELVIQLKGFSE CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHCCCHH KYNSRVTSEITDDGIYLINTVAISGPFEYLTSTWQFVPCTAGTELKFFIDFKMKSVILDK HHCCHHHHHCCCCCEEEEEEEEECCCHHHHHCCCEEEEECCCCEEEEEEEHHHHHHHHHH LIGTYFSKATEKMIIAFEKRAKEVIK HHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ASFEQIKVLPYQLQKLFDLVWDVESYPKFLPWCSASRIISANNQEVIAELVIQLKGFSE CCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHCCCHH KYNSRVTSEITDDGIYLINTVAISGPFEYLTSTWQFVPCTAGTELKFFIDFKMKSVILDK HHCCHHHHHCCCCCEEEEEEEEECCCHHHHHCCCEEEEECCCCEEEEEEEHHHHHHHHHH LIGTYFSKATEKMIIAFEKRAKEVIK HHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]