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The map label for this gene is yibN [H]

Identifier: 157373050

GI number: 157373050

Start: 5335288

End: 5335722

Strand: Reverse

Name: yibN [H]

Synonym: Spro_4818

Alternate gene names: 157373050

Gene position: 5335722-5335288 (Counterclockwise)

Preceding gene: 157373055

Following gene: 157373049

Centisome position: 97.92

GC content: 54.94

Gene sequence:

>435_bases
ATGCTGCAAGAAATTATGCAATTCGTTAGCAAGCATCCCATACTGAGCCTGGCCTGGATCGCCCTGCTGGTTGCGGTGAT
CGTCATGACGTTCAAGAGCAGTTTCTCCAAGGTGAAAGAGATCACCCGTGGTGAAGCCACCCGCCTGATTAATAAAGAAG
ATGCCGTTGTGGTTGATACCCGCAGCCGTGATGATTTCCGCCGAGGCCACCTGGCCAACGCCATCAACCTGACCGCCAGC
GAAATCAAAAGCGGCAGTCTGGGCGAGCTGGAAAAACACAAGGCTCAGCCGATCATCGTGGTTTGTGCCAACGGCACCAC
CTCCCGCGAGCCGGCAGAGAACCTGAGCAAGGCCGGTTTTGAAAATGTAGTTACGCTGAAAGACGGTATTGCCGGCTGGA
GCGGGGAAAACCTGCCGTTAGTGCGCGGTAAGTAA

Upstream 100 bases:

>100_bases
CAATAGCGCTTGCTTATTGGCTGTATTTGCTGCACTCGGCAGGTATACTCTGGAACCTTGAGTTATTTTTTCCCTTAACT
AACGGGAGTTGTTACACCCC

Downstream 100 bases:

>100_bases
TTCTTTAACGTATTTGAGGTGGTAATCCATGGCTAACATTGATATCTACACCAAAGCGACCTGTCCGTTCTGTCATCGCG
CCAAAGCGTTGCTGAACAGC

Product: rhodanese domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MLQEIMQFVSKHPILSLAWIALLVAVIVMTFKSSFSKVKEITRGEATRLINKEDAVVVDTRSRDDFRRGHLANAINLTAS
EIKSGSLGELEKHKAQPIIVVCANGTTSREPAENLSKAGFENVVTLKDGIAGWSGENLPLVRGK

Sequences:

>Translated_144_residues
MLQEIMQFVSKHPILSLAWIALLVAVIVMTFKSSFSKVKEITRGEATRLINKEDAVVVDTRSRDDFRRGHLANAINLTAS
EIKSGSLGELEKHKAQPIIVVCANGTTSREPAENLSKAGFENVVTLKDGIAGWSGENLPLVRGK
>Mature_144_residues
MLQEIMQFVSKHPILSLAWIALLVAVIVMTFKSSFSKVKEITRGEATRLINKEDAVVVDTRSRDDFRRGHLANAINLTAS
EIKSGSLGELEKHKAQPIIVVCANGTTSREPAENLSKAGFENVVTLKDGIAGWSGENLPLVRGK

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

Organism=Escherichia coli, GI1790040, Length=143, Percent_Identity=71.3286713286713, Blast_Score=213, Evalue=5e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 15727; Mature: 15727

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQEIMQFVSKHPILSLAWIALLVAVIVMTFKSSFSKVKEITRGEATRLINKEDAVVVDT
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
RSRDDFRRGHLANAINLTASEIKSGSLGELEKHKAQPIIVVCANGTTSREPAENLSKAGF
CCCCHHHHHHHHHHHHCCHHHHCCCCCCCHHHHCCCCEEEEECCCCCCCCHHHHHHHCCC
ENVVTLKDGIAGWSGENLPLVRGK
CCEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLQEIMQFVSKHPILSLAWIALLVAVIVMTFKSSFSKVKEITRGEATRLINKEDAVVVDT
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
RSRDDFRRGHLANAINLTASEIKSGSLGELEKHKAQPIIVVCANGTTSREPAENLSKAGF
CCCCHHHHHHHHHHHHCCHHHHCCCCCCCHHHHCCCCEEEEECCCCCCCCHHHHHHHCCC
ENVVTLKDGIAGWSGENLPLVRGK
CCEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]