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The map label for this gene is rbsC [H]

Identifier: 157372928

GI number: 157372928

Start: 5189139

End: 5190092

Strand: Direct

Name: rbsC [H]

Synonym: Spro_4696

Alternate gene names: 157372928

Gene position: 5189139-5190092 (Clockwise)

Preceding gene: 157372927

Following gene: 157372929

Centisome position: 95.23

GC content: 61.64

Gene sequence:

>954_bases
ATGACCCAGTTAACCCGCCTGATCCCAAGCGATCGGATCATCCGCCTGCAAAGCGCGATCATTATTGTCGTGGCGCTGCT
GTTCGCCGGGCTGCTTGGATCGCGCTTCTTCAGCCTCGGCAATTTCCAGTCGATCGCCTCGCAGTTGCCGATCCTCGGCA
TGTTGGCGCTCGGCATGGGCATTACCATGCTGACCGGCGGTATCAATCTGTCGATTATCGCCGGGGCCAACGCCTGTTCG
CTGGTGATGGCGGCAATTATCGTCAGCCACCCGGACCAACCGCTGTTTCTGGTTCTGGCGCTGCTGGCCGGGTTGTTGGT
CGCCGTCGCCATTGGCGCGCTTAACGGCGTGCTGGTCGCCTGGGTCGGCGTTTCGCCGATCCTTGCCTCTCTCGGCACCA
TGACGCTGATCACCGGCCTGAATATTCTGTTGTCCAACGGCGCGGTGATCTCCGGCTTCCCGGCGGCGATTCAGTATCTC
GGCAACGGCAGCCTGCTCGGCATTCCGGTGGCGCTGCTGCTGTTCCTGCTGGTCGCCGTGGGCCTGTGGCTGTTGCTGGA
GCACACCACGCTGGGGCGCAGCCTGTATTTAATCGGCTCCAACGAGCAGGCTACCCGTTTCAGCGGGGTGAACACCGCCC
GGGTGCAAATCGCGGTGTATGTGCTGTCCGCCCTGCTCGGCTGGGGTGCGGCGTTGCTGATGATGGCCAAGTTCAACTCG
GCCAAGGCCGGCTACGGCGAATCCTATTTGCTGGTGACCATTCTGGCCTCGGTGCTGGGTGGGATTAACCCGGACGGCGG
GTTTGGCCGGGTGCTTGGCCTGGTGCTGGCACTGATTGTGCTGCAAATGCTGGAAAGCGGCCTCAACCTGCTGGGCGTCA
GCAGCTATCTGACCATGGCCCTGTGGGGTGCGGTGTTGATCTTGTTTATCGCGTTACAGAATCGAAAAGCCTAG

Upstream 100 bases:

>100_bases
TCGGCCTATTGGCACCAGGTGTTCAGCGGCGCGATCATTTTGATCAGCATCAGCAGCACCGCCTGGAATGAAAAACGCAA
GCTGGCCAAGGAGCTATGAG

Downstream 100 bases:

>100_bases
GAGAAAAATAATGGCGAGCTATTTTATTGGCGTAGATGTAGGCACCGGAAGTGCGCGCGCTGGGGTATTCGATCTCAACG
GCCATATGGTCGGGCAGGCC

Product: monosaccharide-transporting ATPase

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MTQLTRLIPSDRIIRLQSAIIIVVALLFAGLLGSRFFSLGNFQSIASQLPILGMLALGMGITMLTGGINLSIIAGANACS
LVMAAIIVSHPDQPLFLVLALLAGLLVAVAIGALNGVLVAWVGVSPILASLGTMTLITGLNILLSNGAVISGFPAAIQYL
GNGSLLGIPVALLLFLLVAVGLWLLLEHTTLGRSLYLIGSNEQATRFSGVNTARVQIAVYVLSALLGWGAALLMMAKFNS
AKAGYGESYLLVTILASVLGGINPDGGFGRVLGLVLALIVLQMLESGLNLLGVSSYLTMALWGAVLILFIALQNRKA

Sequences:

>Translated_317_residues
MTQLTRLIPSDRIIRLQSAIIIVVALLFAGLLGSRFFSLGNFQSIASQLPILGMLALGMGITMLTGGINLSIIAGANACS
LVMAAIIVSHPDQPLFLVLALLAGLLVAVAIGALNGVLVAWVGVSPILASLGTMTLITGLNILLSNGAVISGFPAAIQYL
GNGSLLGIPVALLLFLLVAVGLWLLLEHTTLGRSLYLIGSNEQATRFSGVNTARVQIAVYVLSALLGWGAALLMMAKFNS
AKAGYGESYLLVTILASVLGGINPDGGFGRVLGLVLALIVLQMLESGLNLLGVSSYLTMALWGAVLILFIALQNRKA
>Mature_316_residues
TQLTRLIPSDRIIRLQSAIIIVVALLFAGLLGSRFFSLGNFQSIASQLPILGMLALGMGITMLTGGINLSIIAGANACSL
VMAAIIVSHPDQPLFLVLALLAGLLVAVAIGALNGVLVAWVGVSPILASLGTMTLITGLNILLSNGAVISGFPAAIQYLG
NGSLLGIPVALLLFLLVAVGLWLLLEHTTLGRSLYLIGSNEQATRFSGVNTARVQIAVYVLSALLGWGAALLMMAKFNSA
KAGYGESYLLVTILASVLGGINPDGGFGRVLGLVLALIVLQMLESGLNLLGVSSYLTMALWGAVLILFIALQNRKA

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=320, Percent_Identity=33.4375, Blast_Score=138, Evalue=6e-34,
Organism=Escherichia coli, GI1787794, Length=302, Percent_Identity=31.7880794701987, Blast_Score=119, Evalue=4e-28,
Organism=Escherichia coli, GI145693152, Length=302, Percent_Identity=28.476821192053, Blast_Score=109, Evalue=3e-25,
Organism=Escherichia coli, GI1790524, Length=295, Percent_Identity=27.4576271186441, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1787793, Length=287, Percent_Identity=31.3588850174216, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1788896, Length=274, Percent_Identity=27.3722627737226, Blast_Score=86, Evalue=5e-18,
Organism=Escherichia coli, GI145693214, Length=246, Percent_Identity=31.7073170731707, Blast_Score=78, Evalue=7e-16,
Organism=Escherichia coli, GI1788471, Length=287, Percent_Identity=29.9651567944251, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI87082395, Length=279, Percent_Identity=27.9569892473118, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1789992, Length=131, Percent_Identity=29.0076335877863, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 32830; Mature: 32699

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQLTRLIPSDRIIRLQSAIIIVVALLFAGLLGSRFFSLGNFQSIASQLPILGMLALGMG
CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHH
ITMLTGGINLSIIAGANACSLVMAAIIVSHPDQPLFLVLALLAGLLVAVAIGALNGVLVA
HHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
WVGVSPILASLGTMTLITGLNILLSNGAVISGFPAAIQYLGNGSLLGIPVALLLFLLVAV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHH
GLWLLLEHTTLGRSLYLIGSNEQATRFSGVNTARVQIAVYVLSALLGWGAALLMMAKFNS
HHHHHHHHHHCCCEEEEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AKAGYGESYLLVTILASVLGGINPDGGFGRVLGLVLALIVLQMLESGLNLLGVSSYLTMA
CCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LWGAVLILFIALQNRKA
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TQLTRLIPSDRIIRLQSAIIIVVALLFAGLLGSRFFSLGNFQSIASQLPILGMLALGMG
CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHH
ITMLTGGINLSIIAGANACSLVMAAIIVSHPDQPLFLVLALLAGLLVAVAIGALNGVLVA
HHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
WVGVSPILASLGTMTLITGLNILLSNGAVISGFPAAIQYLGNGSLLGIPVALLLFLLVAV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHH
GLWLLLEHTTLGRSLYLIGSNEQATRFSGVNTARVQIAVYVLSALLGWGAALLMMAKFNS
HHHHHHHHHHCCCEEEEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AKAGYGESYLLVTILASVLGGINPDGGFGRVLGLVLALIVLQMLESGLNLLGVSSYLTMA
CCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LWGAVLILFIALQNRKA
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]