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The map label for this gene is rbsC [H]

Identifier: 157372927

GI number: 157372927

Start: 5188148

End: 5189137

Strand: Direct

Name: rbsC [H]

Synonym: Spro_4695

Alternate gene names: 157372927

Gene position: 5188148-5189137 (Clockwise)

Preceding gene: 157372926

Following gene: 157372928

Centisome position: 95.22

GC content: 61.62

Gene sequence:

>990_bases
ATGGATAAGTCATTACTGGCCCGCCTGGCCGGGCGGCACGAATTTTACCTTGGCCTGCTGGTGTTGTTGCTGGCCATCGG
CCTGAGCGTTAGCACCAGCGAGTTTCTGACGCTGGGCAACCTGACCGACGTCGCCACCAGCTATGCCATTCTCGGCATTC
TAGCCTGCGGCCTGTTCGTGGTGCTGATTGCCGGGGGCATCGACATTTCGTTCCCGGCGATCACCGCTATCGCCCAGTAC
GTGATGGCCAGTTGGGTGATCCAGCACGGCGGCGGTTTCCCGCTGGCGTTCGCTCTGGCGATAGGCGTCGGTCTGCTGCT
CGGGCTGGTGAACGGTTTTCTGGTCTACTGGCTGAAAGTACCGGCAATCATCATCACCATCGCCACGCTGAACCTGTTCT
ACGGCCTGCTGGTGTACGCCACCAACGGCACCTGGCTGTACGGTTTCCCCGACTGGTTTATGGACGGCATCAGTTGGTTC
TCGTTCCAGGGCGCCGACGGCTACGACTACGGCCTGACGCTGCCGCTATTGTGCCTGCTGGCGGTGATTATCGTCACCGG
CGTGCTGATGAACTTCACCCGTCTTGGCCGCCAGATTTTCGCCATGGGCGGCAACCGTGATGCGGCATCGCGTCTGGGGT
TGAACCTGCTGCGACTGCACTTCTACGTTTACGGTTACATGGGCATTCTGGCGGGTATCGCCGCCGTGGTGCAGGCACAG
ATCACCCAGTCGGTGGCGCCCAACTCCCTGCTCGGCTTCGAACTGACGGTGCTGGCGGCGGTGGTACTGGGCGGCACCAG
CATGACCGGCGGCCGCGGCTCGCTGACCGGTACGCTGCTCGGCGTGGTGCTGCTGGCGTTCCTGCAGAACGGTCTGACGC
TGCTCAGCGTATCGGCCTATTGGCACCAGGTGTTCAGCGGCGCGATCATTTTGATCAGCATCAGCAGCACCGCCTGGAAT
GAAAAACGCAAGCTGGCCAAGGAGCTATGA

Upstream 100 bases:

>100_bases
TATTACAACAGCCATCGGGTGTTGGTGATGCGCAAGGGCGAGCTGATCGCCGAGTTTTCGCCGCACCAGAGTACCGAACA
ACAGATCGCCGAGGTGGTGA

Downstream 100 bases:

>100_bases
GATGACCCAGTTAACCCGCCTGATCCCAAGCGATCGGATCATCCGCCTGCAAAGCGCGATCATTATTGTCGTGGCGCTGC
TGTTCGCCGGGCTGCTTGGA

Product: monosaccharide-transporting ATPase

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MDKSLLARLAGRHEFYLGLLVLLLAIGLSVSTSEFLTLGNLTDVATSYAILGILACGLFVVLIAGGIDISFPAITAIAQY
VMASWVIQHGGGFPLAFALAIGVGLLLGLVNGFLVYWLKVPAIIITIATLNLFYGLLVYATNGTWLYGFPDWFMDGISWF
SFQGADGYDYGLTLPLLCLLAVIIVTGVLMNFTRLGRQIFAMGGNRDAASRLGLNLLRLHFYVYGYMGILAGIAAVVQAQ
ITQSVAPNSLLGFELTVLAAVVLGGTSMTGGRGSLTGTLLGVVLLAFLQNGLTLLSVSAYWHQVFSGAIILISISSTAWN
EKRKLAKEL

Sequences:

>Translated_329_residues
MDKSLLARLAGRHEFYLGLLVLLLAIGLSVSTSEFLTLGNLTDVATSYAILGILACGLFVVLIAGGIDISFPAITAIAQY
VMASWVIQHGGGFPLAFALAIGVGLLLGLVNGFLVYWLKVPAIIITIATLNLFYGLLVYATNGTWLYGFPDWFMDGISWF
SFQGADGYDYGLTLPLLCLLAVIIVTGVLMNFTRLGRQIFAMGGNRDAASRLGLNLLRLHFYVYGYMGILAGIAAVVQAQ
ITQSVAPNSLLGFELTVLAAVVLGGTSMTGGRGSLTGTLLGVVLLAFLQNGLTLLSVSAYWHQVFSGAIILISISSTAWN
EKRKLAKEL
>Mature_329_residues
MDKSLLARLAGRHEFYLGLLVLLLAIGLSVSTSEFLTLGNLTDVATSYAILGILACGLFVVLIAGGIDISFPAITAIAQY
VMASWVIQHGGGFPLAFALAIGVGLLLGLVNGFLVYWLKVPAIIITIATLNLFYGLLVYATNGTWLYGFPDWFMDGISWF
SFQGADGYDYGLTLPLLCLLAVIIVTGVLMNFTRLGRQIFAMGGNRDAASRLGLNLLRLHFYVYGYMGILAGIAAVVQAQ
ITQSVAPNSLLGFELTVLAAVVLGGTSMTGGRGSLTGTLLGVVLLAFLQNGLTLLSVSAYWHQVFSGAIILISISSTAWN
EKRKLAKEL

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=297, Percent_Identity=34.6801346801347, Blast_Score=132, Evalue=5e-32,
Organism=Escherichia coli, GI145693152, Length=318, Percent_Identity=30.8176100628931, Blast_Score=121, Evalue=6e-29,
Organism=Escherichia coli, GI1790524, Length=297, Percent_Identity=29.6296296296296, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1788896, Length=326, Percent_Identity=29.1411042944785, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI87082395, Length=290, Percent_Identity=28.9655172413793, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1787793, Length=279, Percent_Identity=31.1827956989247, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1787794, Length=324, Percent_Identity=30.5555555555556, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1789992, Length=132, Percent_Identity=33.3333333333333, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI145693214, Length=267, Percent_Identity=30.3370786516854, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1788471, Length=247, Percent_Identity=31.1740890688259, Blast_Score=68, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 35027; Mature: 35027

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKSLLARLAGRHEFYLGLLVLLLAIGLSVSTSEFLTLGNLTDVATSYAILGILACGLFV
CCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHH
VLIAGGIDISFPAITAIAQYVMASWVIQHGGGFPLAFALAIGVGLLLGLVNGFLVYWLKV
HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
PAIIITIATLNLFYGLLVYATNGTWLYGFPDWFMDGISWFSFQGADGYDYGLTLPLLCLL
HHHHHHHHHHHHHHHHHHEECCCCEEEECHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
AVIIVTGVLMNFTRLGRQIFAMGGNRDAASRLGLNLLRLHFYVYGYMGILAGIAAVVQAQ
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITQSVAPNSLLGFELTVLAAVVLGGTSMTGGRGSLTGTLLGVVLLAFLQNGLTLLSVSAY
HHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHEEHHHHH
WHQVFSGAIILISISSTAWNEKRKLAKEL
HHHHHCCEEEEEEECCCCHHHHHHHHHCC
>Mature Secondary Structure
MDKSLLARLAGRHEFYLGLLVLLLAIGLSVSTSEFLTLGNLTDVATSYAILGILACGLFV
CCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHH
VLIAGGIDISFPAITAIAQYVMASWVIQHGGGFPLAFALAIGVGLLLGLVNGFLVYWLKV
HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
PAIIITIATLNLFYGLLVYATNGTWLYGFPDWFMDGISWFSFQGADGYDYGLTLPLLCLL
HHHHHHHHHHHHHHHHHHEECCCCEEEECHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
AVIIVTGVLMNFTRLGRQIFAMGGNRDAASRLGLNLLRLHFYVYGYMGILAGIAAVVQAQ
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITQSVAPNSLLGFELTVLAAVVLGGTSMTGGRGSLTGTLLGVVLLAFLQNGLTLLSVSAY
HHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHEEHHHHH
WHQVFSGAIILISISSTAWNEKRKLAKEL
HHHHHCCEEEEEEECCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]