| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yhiN [H]
Identifier: 157372920
GI number: 157372920
Start: 5179233
End: 5180474
Strand: Reverse
Name: yhiN [H]
Synonym: Spro_4688
Alternate gene names: 157372920
Gene position: 5180474-5179233 (Counterclockwise)
Preceding gene: 157372922
Following gene: 157372918
Centisome position: 95.07
GC content: 58.7
Gene sequence:
>1242_bases ATGGCGGCCTTTTGTCGCGATTGTGGTTTTTATAGAGAGGCGCAGGTGGAACAGTTTGATGTCGTGGTAATAGGTGCGGG CGCAGCGGGTATGTTTTGCGCGGCGCAGGCAGGGCAACTCGGTCGCCGGGCGCTGCTGCTCGACAACGGCAAAAAACCGG GCCGCAAAATCCTGATGTCCGGCGGCGGACGCTGTAACTTTACCAATATGTACACCGAACCGGCCGCTTACCTGTCGAAT AACCCGCATTTTTGTAAATCGGCACTGGCGCGTTACACCCAGTGGGATTTTATCGATCTGATCAATCGCCACGGTATTGC CTATCACGAGAAAACGCTCGGGCAGCTGTTTTGCGACGACTCGGCGCAGCAGGTGGTCGAACTGTTGGTTAAAGAGTGCG AGCTGGGCCAGGTGACGACACGTCTGCGCAGCGAAGTGCTGGCGGTGGAAAAAACGGACGAAGGCTTCGAACTGGCGCTT AATGGCGAGAAAGTGAGCGCTCGCTCACTTGTGGTGGCCAGCGGCGGTCTGTCAATGCCAGGGCTGGGCGCTTCCCCGTT CGGCTACAAGCTGGCGGAGCAGTTTGGCCTGAAGGTTCTGCCGACGCGCGCCGCGCTGGTGCCTTTCACGCTGCATAAAC CGTTGCTGGAACACCTGCAAACCCTGTCTGGCGTCTCTGTACCGGCGGTGATCACTGCCGAAAACGGCGTTAGCTTCCGT GAGAGCCTGCTTTTCACCCACCGTGGCCTGTCCGGCCCGGCGGTATTGCAGCTTTCCAGCTACTGGCAACCCGGTGAGTT TGTAAGCGTTAACTTACTTCCTGCGCTAGATCTGGCGGGCTTCCTCAATGAGCAACGCCAGGCTCATCCGAATCAAAGCC TGAAAAACACCCTGGCGCTGCACCTGCCAAAGCGTCTGGTGGAATGTTTACAGACGCTGGGGCAATTACCGGAAGTTACC TTGAAGCAGTTGAACCCGACACAGCAGGCTGCGCTGGTCGAAACATTGCAAAATTGGCGGGTACAGCCGAACGGCACCGA AGGCTATCGCACGGCGGAAGTGACGCTCGGCGGGGTCGACACCAAAGAGTTGTCCTCCAAGACCATGGAGGCCGCCAAGG TGCCGGGCCTGTACTTTATCGGCGAAGTGGTGGATGTGACAGGGTGGCTGGGGGGCTATAACTTCCAGTGGGCCTGGAGC TCAGCCTGGGCCTGTGCCCAGGCGCTGGCAGCCGAAGACTAA
Upstream 100 bases:
>100_bases TGGTCCGTTGTAATATTTTCTTACTATGGCGTTGTCAGCGTCATGGCTTTACAATCTGCCGCCGTAAAGTTGCCGGTTAC CGGTAGCGATTCGGCGTAAT
Downstream 100 bases:
>100_bases GCCGCTATCTCGCGAGAGTCAGCCGCATGGCGGACGGCGTCAGGCCAAAATAGCGGCGAAATTGGGTACTGAATTGCCCC GGTGAACTGAAACCGCACTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MAAFCRDCGFYREAQVEQFDVVVIGAGAAGMFCAAQAGQLGRRALLLDNGKKPGRKILMSGGGRCNFTNMYTEPAAYLSN NPHFCKSALARYTQWDFIDLINRHGIAYHEKTLGQLFCDDSAQQVVELLVKECELGQVTTRLRSEVLAVEKTDEGFELAL NGEKVSARSLVVASGGLSMPGLGASPFGYKLAEQFGLKVLPTRAALVPFTLHKPLLEHLQTLSGVSVPAVITAENGVSFR ESLLFTHRGLSGPAVLQLSSYWQPGEFVSVNLLPALDLAGFLNEQRQAHPNQSLKNTLALHLPKRLVECLQTLGQLPEVT LKQLNPTQQAALVETLQNWRVQPNGTEGYRTAEVTLGGVDTKELSSKTMEAAKVPGLYFIGEVVDVTGWLGGYNFQWAWS SAWACAQALAAED
Sequences:
>Translated_413_residues MAAFCRDCGFYREAQVEQFDVVVIGAGAAGMFCAAQAGQLGRRALLLDNGKKPGRKILMSGGGRCNFTNMYTEPAAYLSN NPHFCKSALARYTQWDFIDLINRHGIAYHEKTLGQLFCDDSAQQVVELLVKECELGQVTTRLRSEVLAVEKTDEGFELAL NGEKVSARSLVVASGGLSMPGLGASPFGYKLAEQFGLKVLPTRAALVPFTLHKPLLEHLQTLSGVSVPAVITAENGVSFR ESLLFTHRGLSGPAVLQLSSYWQPGEFVSVNLLPALDLAGFLNEQRQAHPNQSLKNTLALHLPKRLVECLQTLGQLPEVT LKQLNPTQQAALVETLQNWRVQPNGTEGYRTAEVTLGGVDTKELSSKTMEAAKVPGLYFIGEVVDVTGWLGGYNFQWAWS SAWACAQALAAED >Mature_412_residues AAFCRDCGFYREAQVEQFDVVVIGAGAAGMFCAAQAGQLGRRALLLDNGKKPGRKILMSGGGRCNFTNMYTEPAAYLSNN PHFCKSALARYTQWDFIDLINRHGIAYHEKTLGQLFCDDSAQQVVELLVKECELGQVTTRLRSEVLAVEKTDEGFELALN GEKVSARSLVVASGGLSMPGLGASPFGYKLAEQFGLKVLPTRAALVPFTLHKPLLEHLQTLSGVSVPAVITAENGVSFRE SLLFTHRGLSGPAVLQLSSYWQPGEFVSVNLLPALDLAGFLNEQRQAHPNQSLKNTLALHLPKRLVECLQTLGQLPEVTL KQLNPTQQAALVETLQNWRVQPNGTEGYRTAEVTLGGVDTKELSSKTMEAAKVPGLYFIGEVVDVTGWLGGYNFQWAWSS AWACAQALAAED
Specific function: Unknown
COG id: COG2081
COG function: function code R; Predicted flavoproteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0933 [H]
Homologues:
Organism=Escherichia coli, GI2367234, Length=396, Percent_Identity=80.3030303030303, Blast_Score=658, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004792 - InterPro: IPR013027 - InterPro: IPR023166 [H]
Pfam domain/function: PF03486 HI0933_like [H]
EC number: NA
Molecular weight: Translated: 44904; Mature: 44773
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAFCRDCGFYREAQVEQFDVVVIGAGAAGMFCAAQAGQLGRRALLLDNGKKPGRKILMS CCCHHHHCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEC GGGRCNFTNMYTEPAAYLSNNPHFCKSALARYTQWDFIDLINRHGIAYHEKTLGQLFCDD CCCEEEECCCCCCCHHHHCCCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHCCC SAQQVVELLVKECELGQVTTRLRSEVLAVEKTDEGFELALNGEKVSARSLVVASGGLSMP HHHHHHHHHHHHCCCHHHHHHHHHHHEEEEECCCCEEEEECCCEECCCEEEEECCCCCCC GLGASPFGYKLAEQFGLKVLPTRAALVPFTLHKPLLEHLQTLSGVSVPAVITAENGVSFR CCCCCCCHHHHHHHCCCEEECCCHHHCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHH ESLLFTHRGLSGPAVLQLSSYWQPGEFVSVNLLPALDLAGFLNEQRQAHPNQSLKNTLAL HHHHHHHCCCCCCEEEEECCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHH HLPKRLVECLQTLGQLPEVTLKQLNPTQQAALVETLQNWRVQPNGTEGYRTAEVTLGGVD HHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCC TKELSSKTMEAAKVPGLYFIGEVVDVTGWLGGYNFQWAWSSAWACAQALAAED HHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHCCC >Mature Secondary Structure AAFCRDCGFYREAQVEQFDVVVIGAGAAGMFCAAQAGQLGRRALLLDNGKKPGRKILMS CCHHHHCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEC GGGRCNFTNMYTEPAAYLSNNPHFCKSALARYTQWDFIDLINRHGIAYHEKTLGQLFCDD CCCEEEECCCCCCCHHHHCCCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHCCC SAQQVVELLVKECELGQVTTRLRSEVLAVEKTDEGFELALNGEKVSARSLVVASGGLSMP HHHHHHHHHHHHCCCHHHHHHHHHHHEEEEECCCCEEEEECCCEECCCEEEEECCCCCCC GLGASPFGYKLAEQFGLKVLPTRAALVPFTLHKPLLEHLQTLSGVSVPAVITAENGVSFR CCCCCCCHHHHHHHCCCEEECCCHHHCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHH ESLLFTHRGLSGPAVLQLSSYWQPGEFVSVNLLPALDLAGFLNEQRQAHPNQSLKNTLAL HHHHHHHCCCCCCEEEEECCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCHHHHHHHHH HLPKRLVECLQTLGQLPEVTLKQLNPTQQAALVETLQNWRVQPNGTEGYRTAEVTLGGVD HHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCC TKELSSKTMEAAKVPGLYFIGEVVDVTGWLGGYNFQWAWSSAWACAQALAAED HHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]