| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is glgP [H]
Identifier: 157372875
GI number: 157372875
Start: 5125347
End: 5127794
Strand: Reverse
Name: glgP [H]
Synonym: Spro_4643
Alternate gene names: 157372875
Gene position: 5127794-5125347 (Counterclockwise)
Preceding gene: 157372876
Following gene: 157372873
Centisome position: 94.11
GC content: 55.27
Gene sequence:
>2448_bases ATGACGTTACCGATTAGTTACACCTCACCCACGGTCAGTGTTGAAGCGCTGAAACACTCCATCGCCTATAAATTGATGTT TATTGTCGGCAAGGACCCGGCAATTGCCAATCAGCATGACTGGCTGAATGCCGTGTTGTTTGCGGTTCGCGACCGTATGG TGGAACGCTGGTTGCGTTCTAACCGTGCGCAACTTTCACAGGATGTGCGTCAGGTGTATTACCTGTCGATGGAGTTCCTG ATCGGCCGCACGTTGTCCAACGCCCTGCTGTCGATGGGCATTTATCAGGATATTGACGACGCATTAAATGAGATGGGGAT GAGCCTGGGCGAGCTGCTGGAGGAAGAGAACGATCCGGGCCTCGGCAACGGTGGCCTGGGGCGGCTGGCGGCCTGTTTCC TGGATTCGCTGGCGACGCTGGCGCTGCCGGGACGTGGCTACGGTATTCGTTATGAATATGGCATGTTCAAACAAAATATC GTCAACGGTCAGCAGATGGAATCGCCGGACTACTGGCTGGAATATGGCAACCCGTGGGAATTCCCACGTCACAACACGCG CTATAAGGTGCGTTTTGGCGGCCGCATTCAACAGGAAGGCGCCAAGGCTCGTTGGGTAGAAACCGAAGAGATTATTGCCA CCGCTTACGATCAGGTGATCCCCGGTTTTGATACCGATGCGACCAACACGCTGCGGCTATGGAGCGCCCAGGCCAGTAAT GAAATCAACCTGGGTAAATTCAACCAGGGCGATTACTTCGCGGCCGTTGAGGATAAAAACCACTCGGAGAACGTGTCACG CGTGCTGTATCCGGATGATTCCACCTATTCCGGGCGCGAACTTCGCCTGCGGCAGGAGTATTTCCTGGTGTCGGCCACGG TGCAGGATATCCTCAACCGCCACTGGACGATGCATAAAAGCTTCGACAACCTGGCAGACAAGATTGCCATTCACCTGAAT GACACTCACCCGGTCCTGTCGATCCCGGAGCTGATGCACCGATTAATTGACGAGCATAAATTCAGTTGGCTGGATGCCTG GGCCGTGGTGGAAAAGGTGTTCTCCTATACCAACCACACGCTGATGAGCGAAGCGCTGGAAACCTGGCCGCTGGATATGA TCGGCCGGATCCTGCCGCGTCACCTGCAGCTGATTTTCGAGATTAACGATCACTTCCTCAAACACGTACAGGAAGTCGCG CCGGGTGACAATGATCTGCTGGCACGAGTGTCTATTATTGATGAAACCAATGGCCGCCGGGTACGTATGGCCTGGCTGGC GGTGGTGGCCAGCCACAAGGTTAACGGCGTTTCTGCGCTGCATTCCGAACTGATGGTGCAATCGTTGTTTGCCGATTTTG CCCATATCTTCCCCGATCGCTTCTGCAATAAAACCAACGGAGTTACGCCACGCCGCTGGCTGGGGCTGGCTAACCGTCCG TTATCCGCCGTACTCGATGACAGTATCGGCCAGACCTGGCGCACCGATCTCAGCCAACTGAGCGAGATCAAGGCCAATGT CGACTACCCGAGTTTCTTGCAGGCTGTGCAGGCCGCCAAACGGCAGAACAAGGAGCGACTGGCTACCTACATCGCCAAAA CGCTGAATGTGGTGGTCAACCCGGATGCGCTGTTCGACGTACAGATCAAGCGTATCCACGAATATAAGCGGCAGTTGCTC AACGTACTGCACGTGATCACGCTGTATAACCGTCTGCTGCAGGATCCGGAAACCGAGCGGGTGCCGCGGGTGGTGATCTT TGCCGGCAAGGCGGCCTCGGCTTATTACGCCGCCAAGCAGATCATTCGCTTGATCAACGATGTCGCCAAGGTGATCAACA ACGATCCGCGCGTGCATACGCAGTTGAAAGTGGTGTTTATCCCGAACTACGGCGTCAGTCTGGCGCAGATGATCATTCCG GCGGCGGATCTTTCCGAGCAGATCTCACTGGCGGGCACCGAGGCGTCCGGCACCAGTAATATGAAGTTTGCGCTTAACGG TGCGCTGACTATCGGCACGCTGGACGGTGCCAACGTCGAGATGCTGGAACACGTGGGTGAGGAGAACATCTTTATCTTCG GCAATACCGCCGAGCAGGTTGAGGAGCTGCGGCGCAACGGTTACAACCCACATCTTTACTATGAGCAGGATCCCGAGCTG CATCAGGCGCTGACTCAGATCGCCACCGGTGCTTTCAGCCCTGAGGAGCCAAAGCGCTACAGTAACCTGTTTGATTCACT GGTTAACCTGGGCGATCACTATCAACTGCTGGCCGATTATCGCAGCTATGTGGATACGCAGGACAAGGTGGATGAGGTGT ATCGCAATCAGGATGACTGGACGCGGCGGGCAATATTGAATATCGCCAACATGGGCTACTTCTCTTCCGACCGCACCATT CAGGAGTATGCGGACGAGATCTGGCACATCAAGCCTATCAAGCTGTAA
Upstream 100 bases:
>100_bases TTATCGTAACTATTGTTATGCCCTATGAATTTCAAGCTGCAGGTAACAAGGCTGCGGCTTGAAAGGCGACGGGCAATCAC GCACTTGGGATCGAAAAACT
Downstream 100 bases:
>100_bases ATACAAAAGGGCCGGAAATCCGGCCCTTTTTAGCTTTGGCGAGTTACGATGCCAGAGACAGGGTTTTCGCTTTCACGTGT TCTGCCAGCCAGGCTTTTAC
Product: glycogen/starch/alpha-glucan phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 815; Mature: 814
Protein sequence:
>815_residues MTLPISYTSPTVSVEALKHSIAYKLMFIVGKDPAIANQHDWLNAVLFAVRDRMVERWLRSNRAQLSQDVRQVYYLSMEFL IGRTLSNALLSMGIYQDIDDALNEMGMSLGELLEEENDPGLGNGGLGRLAACFLDSLATLALPGRGYGIRYEYGMFKQNI VNGQQMESPDYWLEYGNPWEFPRHNTRYKVRFGGRIQQEGAKARWVETEEIIATAYDQVIPGFDTDATNTLRLWSAQASN EINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILNRHWTMHKSFDNLADKIAIHLN DTHPVLSIPELMHRLIDEHKFSWLDAWAVVEKVFSYTNHTLMSEALETWPLDMIGRILPRHLQLIFEINDHFLKHVQEVA PGDNDLLARVSIIDETNGRRVRMAWLAVVASHKVNGVSALHSELMVQSLFADFAHIFPDRFCNKTNGVTPRRWLGLANRP LSAVLDDSIGQTWRTDLSQLSEIKANVDYPSFLQAVQAAKRQNKERLATYIAKTLNVVVNPDALFDVQIKRIHEYKRQLL NVLHVITLYNRLLQDPETERVPRVVIFAGKAASAYYAAKQIIRLINDVAKVINNDPRVHTQLKVVFIPNYGVSLAQMIIP AADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFIFGNTAEQVEELRRNGYNPHLYYEQDPEL HQALTQIATGAFSPEEPKRYSNLFDSLVNLGDHYQLLADYRSYVDTQDKVDEVYRNQDDWTRRAILNIANMGYFSSDRTI QEYADEIWHIKPIKL
Sequences:
>Translated_815_residues MTLPISYTSPTVSVEALKHSIAYKLMFIVGKDPAIANQHDWLNAVLFAVRDRMVERWLRSNRAQLSQDVRQVYYLSMEFL IGRTLSNALLSMGIYQDIDDALNEMGMSLGELLEEENDPGLGNGGLGRLAACFLDSLATLALPGRGYGIRYEYGMFKQNI VNGQQMESPDYWLEYGNPWEFPRHNTRYKVRFGGRIQQEGAKARWVETEEIIATAYDQVIPGFDTDATNTLRLWSAQASN EINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILNRHWTMHKSFDNLADKIAIHLN DTHPVLSIPELMHRLIDEHKFSWLDAWAVVEKVFSYTNHTLMSEALETWPLDMIGRILPRHLQLIFEINDHFLKHVQEVA PGDNDLLARVSIIDETNGRRVRMAWLAVVASHKVNGVSALHSELMVQSLFADFAHIFPDRFCNKTNGVTPRRWLGLANRP LSAVLDDSIGQTWRTDLSQLSEIKANVDYPSFLQAVQAAKRQNKERLATYIAKTLNVVVNPDALFDVQIKRIHEYKRQLL NVLHVITLYNRLLQDPETERVPRVVIFAGKAASAYYAAKQIIRLINDVAKVINNDPRVHTQLKVVFIPNYGVSLAQMIIP AADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFIFGNTAEQVEELRRNGYNPHLYYEQDPEL HQALTQIATGAFSPEEPKRYSNLFDSLVNLGDHYQLLADYRSYVDTQDKVDEVYRNQDDWTRRAILNIANMGYFSSDRTI QEYADEIWHIKPIKL >Mature_814_residues TLPISYTSPTVSVEALKHSIAYKLMFIVGKDPAIANQHDWLNAVLFAVRDRMVERWLRSNRAQLSQDVRQVYYLSMEFLI GRTLSNALLSMGIYQDIDDALNEMGMSLGELLEEENDPGLGNGGLGRLAACFLDSLATLALPGRGYGIRYEYGMFKQNIV NGQQMESPDYWLEYGNPWEFPRHNTRYKVRFGGRIQQEGAKARWVETEEIIATAYDQVIPGFDTDATNTLRLWSAQASNE INLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILNRHWTMHKSFDNLADKIAIHLND THPVLSIPELMHRLIDEHKFSWLDAWAVVEKVFSYTNHTLMSEALETWPLDMIGRILPRHLQLIFEINDHFLKHVQEVAP GDNDLLARVSIIDETNGRRVRMAWLAVVASHKVNGVSALHSELMVQSLFADFAHIFPDRFCNKTNGVTPRRWLGLANRPL SAVLDDSIGQTWRTDLSQLSEIKANVDYPSFLQAVQAAKRQNKERLATYIAKTLNVVVNPDALFDVQIKRIHEYKRQLLN VLHVITLYNRLLQDPETERVPRVVIFAGKAASAYYAAKQIIRLINDVAKVINNDPRVHTQLKVVFIPNYGVSLAQMIIPA ADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFIFGNTAEQVEELRRNGYNPHLYYEQDPELH QALTQIATGAFSPEEPKRYSNLFDSLVNLGDHYQLLADYRSYVDTQDKVDEVYRNQDDWTRRAILNIANMGYFSSDRTIQ EYADEIWHIKPIKL
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI21361370, Length=810, Percent_Identity=50.2469135802469, Blast_Score=809, Evalue=0.0, Organism=Homo sapiens, GI5032009, Length=811, Percent_Identity=49.5684340320592, Blast_Score=800, Evalue=0.0, Organism=Homo sapiens, GI71037379, Length=814, Percent_Identity=49.1400491400491, Blast_Score=791, Evalue=0.0, Organism=Homo sapiens, GI255653002, Length=814, Percent_Identity=47.7886977886978, Blast_Score=744, Evalue=0.0, Organism=Homo sapiens, GI257900462, Length=666, Percent_Identity=50.1501501501502, Blast_Score=693, Evalue=0.0, Organism=Escherichia coli, GI2367228, Length=815, Percent_Identity=79.2638036809816, Blast_Score=1344, Evalue=0.0, Organism=Escherichia coli, GI48994936, Length=768, Percent_Identity=47.3958333333333, Blast_Score=729, Evalue=0.0, Organism=Caenorhabditis elegans, GI17564550, Length=809, Percent_Identity=49.814585908529, Blast_Score=818, Evalue=0.0, Organism=Caenorhabditis elegans, GI32566204, Length=809, Percent_Identity=49.814585908529, Blast_Score=816, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6325418, Length=813, Percent_Identity=46.3714637146371, Blast_Score=708, Evalue=0.0, Organism=Drosophila melanogaster, GI78706832, Length=808, Percent_Identity=50.1237623762376, Blast_Score=813, Evalue=0.0, Organism=Drosophila melanogaster, GI24581010, Length=808, Percent_Identity=50.1237623762376, Blast_Score=813, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011833 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 92916; Mature: 92785
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: PS00102 PHOSPHORYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPISYTSPTVSVEALKHSIAYKLMFIVGKDPAIANQHDWLNAVLFAVRDRMVERWLRS CEECCCCCCCCHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH NRAQLSQDVRQVYYLSMEFLIGRTLSNALLSMGIYQDIDDALNEMGMSLGELLEEENDPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LGNGGLGRLAACFLDSLATLALPGRGYGIRYEYGMFKQNIVNGQQMESPDYWLEYGNPWE CCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHCCCCCCCCCCCEEECCCCCC FPRHNTRYKVRFGGRIQQEGAKARWVETEEIIATAYDQVIPGFDTDATNTLRLWSAQASN CCCCCCEEEEEECCEEHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCC EINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILNR CCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHH HWTMHKSFDNLADKIAIHLNDTHPVLSIPELMHRLIDEHKFSWLDAWAVVEKVFSYTNHT HCCHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMSEALETWPLDMIGRILPRHLQLIFEINDHFLKHVQEVAPGDNDLLARVSIIDETNGRR HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCE VRMAWLAVVASHKVNGVSALHSELMVQSLFADFAHIFPDRFCNKTNGVTPRRWLGLANRP EHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCC LSAVLDDSIGQTWRTDLSQLSEIKANVDYPSFLQAVQAAKRQNKERLATYIAKTLNVVVN HHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC PDALFDVQIKRIHEYKRQLLNVLHVITLYNRLLQDPETERVPRVVIFAGKAASAYYAAKQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHH IIRLINDVAKVINNDPRVHTQLKVVFIPNYGVSLAQMIIPAADLSEQISLAGTEASGTSN HHHHHHHHHHHHCCCCCEEEEEEEEEECCCCHHHHHHHHCHHCHHHHHHCCCCCCCCCCC MKFALNGALTIGTLDGANVEMLEHVGEENIFIFGNTAEQVEELRRNGYNPHLYYEQDPEL EEEEEECEEEEEECCCCCHHHHHHCCCCCEEEECCCHHHHHHHHHCCCCCCEEECCCCHH HQALTQIATGAFSPEEPKRYSNLFDSLVNLGDHYQLLADYRSYVDTQDKVDEVYRNQDDW HHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHH TRRAILNIANMGYFSSDRTIQEYADEIWHIKPIKL HHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure TLPISYTSPTVSVEALKHSIAYKLMFIVGKDPAIANQHDWLNAVLFAVRDRMVERWLRS EECCCCCCCCHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH NRAQLSQDVRQVYYLSMEFLIGRTLSNALLSMGIYQDIDDALNEMGMSLGELLEEENDPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LGNGGLGRLAACFLDSLATLALPGRGYGIRYEYGMFKQNIVNGQQMESPDYWLEYGNPWE CCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHCCCCCCCCCCCEEECCCCCC FPRHNTRYKVRFGGRIQQEGAKARWVETEEIIATAYDQVIPGFDTDATNTLRLWSAQASN CCCCCCEEEEEECCEEHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCC EINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILNR CCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHH HWTMHKSFDNLADKIAIHLNDTHPVLSIPELMHRLIDEHKFSWLDAWAVVEKVFSYTNHT HCCHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMSEALETWPLDMIGRILPRHLQLIFEINDHFLKHVQEVAPGDNDLLARVSIIDETNGRR HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCE VRMAWLAVVASHKVNGVSALHSELMVQSLFADFAHIFPDRFCNKTNGVTPRRWLGLANRP EHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCC LSAVLDDSIGQTWRTDLSQLSEIKANVDYPSFLQAVQAAKRQNKERLATYIAKTLNVVVN HHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC PDALFDVQIKRIHEYKRQLLNVLHVITLYNRLLQDPETERVPRVVIFAGKAASAYYAAKQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHH IIRLINDVAKVINNDPRVHTQLKVVFIPNYGVSLAQMIIPAADLSEQISLAGTEASGTSN HHHHHHHHHHHHCCCCCEEEEEEEEEECCCCHHHHHHHHCHHCHHHHHHCCCCCCCCCCC MKFALNGALTIGTLDGANVEMLEHVGEENIFIFGNTAEQVEELRRNGYNPHLYYEQDPEL EEEEEECEEEEEECCCCCHHHHHHCCCCCEEEECCCHHHHHHHHHCCCCCCEEECCCCHH HQALTQIATGAFSPEEPKRYSNLFDSLVNLGDHYQLLADYRSYVDTQDKVDEVYRNQDDW HHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHH TRRAILNIANMGYFSSDRTIQEYADEIWHIKPIKL HHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2645169; 3047129; 9278503; 2975249; 3097003 [H]