| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157372873
Identifier: 157372873
GI number: 157372873
Start: 5122408
End: 5123409
Strand: Reverse
Name: 157372873
Synonym: Spro_4641
Alternate gene names: NA
Gene position: 5123409-5122408 (Counterclockwise)
Preceding gene: 157372875
Following gene: 157372868
Centisome position: 94.03
GC content: 44.91
Gene sequence:
>1002_bases ATGTCTGATAATGATCTGATTCTCTACACTTCTGAAGACGGTAAATCTCAGTTTATTCTACGTTCATTGGAGGGGCAGGT ATGGCTTACGCAGTTAGAAATGGCCGAACTTTACCAAACCAGTAAGCAGAATATTGGCAAACATGTAAAAGGGGTGATCG CAGATAAAGAGCTGGCTGAAGGGGCAGTTGTAAACCGCAAGTTTACAACTGGGGCGGACGGTAAAGAGTACCTAACGCTG CTGTACTCTTTACCGATGATTATCTCTGTGGGTTATCGGGTTCGCTCAACTCGTGGTACGCAGTTCAGACAATGGGCCAC TCGGACGCTGGGTGAATATATGCTCAAAGGCTTCGCTATGGATGACGAACGCCTGAAAGATCCCAAATGGGATTACTTCG ACGAGCTTCTTGAGCGCATCCGTGATATTCGCACTTCCGAGTTACGCTTTTATCAAAAAATCCGCGATCTGTTTACGCTA TCAGAAGATTACAGAGCTAACGAAAAAGACACTGGGTTATTGTTTGCTGAAGTGCAGAACAAACTGTTTTTTGCTGTTAC AGGATATACCGCCGCAGAACTGGTAGTGCAGCGTGCTGATACTACTAAATCCAATATGAATCTGACGAGCTTCAAAGGCC CCAGAGTACGTAAGGCCGACGTGGTAGTCGCCAAAAATTATCTTAACGAAGATGAGCTGGATAGTTTAAATCGTCTGGCC TCTATGTTCTTCGAATTTGCAGAGTTTCGGGCGAAGAGTAAACAGCATCTTAAATTGGCTGATTGGCGGCAGTATATCGA TAATTTTATGGCTTTCAATGAACAGCCACTGTTGAGCCACTGTGGCTCCGTAAGTCGTGAACAGATGAAGTCTGTTGTAC ACCAACGTTATGAATCCTTCGATCAGCAAAGAAAAATGACTGATGCACGTGAGGCCGACCGAATTGAACTGGAACAACTT GAGCAGCTTGAAAAACGCTTAAGCAGGAAAAATGCTCCCTAG
Upstream 100 bases:
>100_bases TTTCTAAGTCGGATGTAGGAAAGTTCACGGGATTAAAACAGGAAAAACAGATGCAGAAGCGGCAAACAGCGTATCACGCT GTAACTCAAGGATGGCTAAA
Downstream 100 bases:
>100_bases CACCTTCTCCAAAAGGAGAAGATGCGAGAGAAGGGCTTAACACAACTCCAGCTGTACGTCGTACTGCTCGATGATTTTCA TCACGCTTGGCGGCGGCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MSDNDLILYTSEDGKSQFILRSLEGQVWLTQLEMAELYQTSKQNIGKHVKGVIADKELAEGAVVNRKFTTGADGKEYLTL LYSLPMIISVGYRVRSTRGTQFRQWATRTLGEYMLKGFAMDDERLKDPKWDYFDELLERIRDIRTSELRFYQKIRDLFTL SEDYRANEKDTGLLFAEVQNKLFFAVTGYTAAELVVQRADTTKSNMNLTSFKGPRVRKADVVVAKNYLNEDELDSLNRLA SMFFEFAEFRAKSKQHLKLADWRQYIDNFMAFNEQPLLSHCGSVSREQMKSVVHQRYESFDQQRKMTDAREADRIELEQL EQLEKRLSRKNAP
Sequences:
>Translated_333_residues MSDNDLILYTSEDGKSQFILRSLEGQVWLTQLEMAELYQTSKQNIGKHVKGVIADKELAEGAVVNRKFTTGADGKEYLTL LYSLPMIISVGYRVRSTRGTQFRQWATRTLGEYMLKGFAMDDERLKDPKWDYFDELLERIRDIRTSELRFYQKIRDLFTL SEDYRANEKDTGLLFAEVQNKLFFAVTGYTAAELVVQRADTTKSNMNLTSFKGPRVRKADVVVAKNYLNEDELDSLNRLA SMFFEFAEFRAKSKQHLKLADWRQYIDNFMAFNEQPLLSHCGSVSREQMKSVVHQRYESFDQQRKMTDAREADRIELEQL EQLEKRLSRKNAP >Mature_332_residues SDNDLILYTSEDGKSQFILRSLEGQVWLTQLEMAELYQTSKQNIGKHVKGVIADKELAEGAVVNRKFTTGADGKEYLTLL YSLPMIISVGYRVRSTRGTQFRQWATRTLGEYMLKGFAMDDERLKDPKWDYFDELLERIRDIRTSELRFYQKIRDLFTLS EDYRANEKDTGLLFAEVQNKLFFAVTGYTAAELVVQRADTTKSNMNLTSFKGPRVRKADVVVAKNYLNEDELDSLNRLAS MFFEFAEFRAKSKQHLKLADWRQYIDNFMAFNEQPLLSHCGSVSREQMKSVVHQRYESFDQQRKMTDAREADRIELEQLE QLEKRLSRKNAP
Specific function: Unknown
COG id: COG3943
COG function: function code R; Virulence protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38913; Mature: 38781
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDNDLILYTSEDGKSQFILRSLEGQVWLTQLEMAELYQTSKQNIGKHVKGVIADKELAE CCCCCEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GAVVNRKFTTGADGKEYLTLLYSLPMIISVGYRVRSTRGTQFRQWATRTLGEYMLKGFAM CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHCCCC DDERLKDPKWDYFDELLERIRDIRTSELRFYQKIRDLFTLSEDYRANEKDTGLLFAEVQN CHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEHEEHHC KLFFAVTGYTAAELVVQRADTTKSNMNLTSFKGPRVRKADVVVAKNYLNEDELDSLNRLA CEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHH SMFFEFAEFRAKSKQHLKLADWRQYIDNFMAFNEQPLLSHCGSVSREQMKSVVHQRYESF HHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHH DQQRKMTDAREADRIELEQLEQLEKRLSRKNAP HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure SDNDLILYTSEDGKSQFILRSLEGQVWLTQLEMAELYQTSKQNIGKHVKGVIADKELAE CCCCEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GAVVNRKFTTGADGKEYLTLLYSLPMIISVGYRVRSTRGTQFRQWATRTLGEYMLKGFAM CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHCCCC DDERLKDPKWDYFDELLERIRDIRTSELRFYQKIRDLFTLSEDYRANEKDTGLLFAEVQN CHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEHEEHHC KLFFAVTGYTAAELVVQRADTTKSNMNLTSFKGPRVRKADVVVAKNYLNEDELDSLNRLA CEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHH SMFFEFAEFRAKSKQHLKLADWRQYIDNFMAFNEQPLLSHCGSVSREQMKSVVHQRYESF HHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHH DQQRKMTDAREADRIELEQLEQLEKRLSRKNAP HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA