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The map label for this gene is stbB [H]

Identifier: 157372851

GI number: 157372851

Start: 5094924

End: 5095403

Strand: Direct

Name: stbB [H]

Synonym: Spro_4619

Alternate gene names: 157372851

Gene position: 5094924-5095403 (Clockwise)

Preceding gene: 157372850

Following gene: 157372855

Centisome position: 93.5

GC content: 51.25

Gene sequence:

>480_bases
ATGATTATTCTCGATACCAATGTAATTTCAGAGTTACTGCGCCCGGCACCTCATTACCATGTTTTAAGGTGGCTGGATCA
ACAAGATACGTATCAATTCTATCTGAGCGCTGTCGTGATAGCGGAGCTATATACTGGCATAGCCTGCATGCCCCATGGCA
AAAAGCAGTTTGAGTTACAGTCCAATCTCGGCGTAATGCTGCAGGAAGAGTTTCTGGACAGGGTTTTACCCTTTGACACT
GGCTGCGCTCTGCAGCATGCGGAGTTAATGGGTGCCAACCGCCGCCAAGGCATCGGCGTCAGTTTCCCAGACACCCAAAT
CGCCGCCACCTGCCTGCATTACGGTGCTGCCCTGGCCACGCGTAATACCAAAGACTTTATCCATTGCGGAATTGAATTAA
TCGACCCCTGGCAAGCCAGCACCGGTCGGCGTCTGCATGAAGAAGCGGCGGAATATTACGTCATGAGCAGAAAACCCTGA

Upstream 100 bases:

>100_bases
ATCAACACTTTGCCGAGTTGGGTGGCGTTGAACTGGAAATCCCACCGCGTGATAAAACACCAGCGCGCATTGTCACCTTT
GATGACGATGATGACCAGGT

Downstream 100 bases:

>100_bases
CAGGGCAGCTTCGCTGTCAGGGGAGTTTGGCGCTGTCTTTCACTGCCTGATGCCCGTTGGCCGACTCTTTCTTTTCCATC
GGCAACGGAATATAAGCCCT

Product: PilT domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MIILDTNVISELLRPAPHYHVLRWLDQQDTYQFYLSAVVIAELYTGIACMPHGKKQFELQSNLGVMLQEEFLDRVLPFDT
GCALQHAELMGANRRQGIGVSFPDTQIAATCLHYGAALATRNTKDFIHCGIELIDPWQASTGRRLHEEAAEYYVMSRKP

Sequences:

>Translated_159_residues
MIILDTNVISELLRPAPHYHVLRWLDQQDTYQFYLSAVVIAELYTGIACMPHGKKQFELQSNLGVMLQEEFLDRVLPFDT
GCALQHAELMGANRRQGIGVSFPDTQIAATCLHYGAALATRNTKDFIHCGIELIDPWQASTGRRLHEEAAEYYVMSRKP
>Mature_159_residues
MIILDTNVISELLRPAPHYHVLRWLDQQDTYQFYLSAVVIAELYTGIACMPHGKKQFELQSNLGVMLQEEFLDRVLPFDT
GCALQHAELMGANRRQGIGVSFPDTQIAATCLHYGAALATRNTKDFIHCGIELIDPWQASTGRRLHEEAAEYYVMSRKP

Specific function: Involved in plasmid stability [H]

COG id: COG1487

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 18023; Mature: 18023

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIILDTNVISELLRPAPHYHVLRWLDQQDTYQFYLSAVVIAELYTGIACMPHGKKQFELQ
CEEECHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEECCCCCHHEEHH
SNLGVMLQEEFLDRVLPFDTGCALQHAELMGANRRQGIGVSFPDTQIAATCLHYGAALAT
CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
RNTKDFIHCGIELIDPWQASTGRRLHEEAAEYYVMSRKP
CCCHHHHHHCHHHCCCCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIILDTNVISELLRPAPHYHVLRWLDQQDTYQFYLSAVVIAELYTGIACMPHGKKQFELQ
CEEECHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEECCCCCHHEEHH
SNLGVMLQEEFLDRVLPFDTGCALQHAELMGANRRQGIGVSFPDTQIAATCLHYGAALAT
CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
RNTKDFIHCGIELIDPWQASTGRRLHEEAAEYYVMSRKP
CCCHHHHHHCHHHCCCCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9326365; 12928499 [H]