| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yegT [H]
Identifier: 157372802
GI number: 157372802
Start: 5044916
End: 5046175
Strand: Reverse
Name: yegT [H]
Synonym: Spro_4570
Alternate gene names: 157372802
Gene position: 5046175-5044916 (Counterclockwise)
Preceding gene: 157372803
Following gene: 157372801
Centisome position: 92.61
GC content: 56.59
Gene sequence:
>1260_bases ATGCAAACTGACAGCGCGGTCCTGGGGACCAAAAGCGTCACATTCAAATGGGTGGTGCCGCGGTTGGCACTGATGATGTT TCTGCAGTTCTTTGTGTGGGGGGCGTGGTACGTCACGCTCGGCGTAGTGATGGGTAAGTTCGGCCTGGCGGCGATCATCG GCGATGCTTACTCGACCGGGCCGATCGCTTCGATTCTGTCACCGTTTGTGCTGGGTATGCTGGTCGATCGCTTCTTCGCC TCGCAGAAGGTGCTGGGGGTGCTGCATCTGATCGGTGCCGGGTTGTTGTGGCTGATGCCCGGCTTCTTCAGCAGTGGACA GAGCGGCCTGTTGTGGATCATTTTCGGTTATATGTTGTGTTATATGCCGACTATCGCTCTCAGCAACAACGTGGCGTTTT ATAGCCTGAGCAACAGCGAAAAAGCCTTTCCTGTGGTGCGGGCGTTCGGCACCTTTGGCTGGATTGTCGCTGGGCTGATC GTCGGTGCCAGCGGATTGTCAGACAGTACCGGTATTTTCACACTGGCGGCGGTGGCCTCGTTGGTGTTGGCCATTTACAG CTTCACCTTGCCACACACCCCGGCACCGGAACGCGGCAAACCGATAAAAATGCGTGACCTGCTGTGTGCCGATGCTTTCG CCATGCTCAAGCAGCGACACTTCCTGGTGTTTATCATCTGCGCGACGCTGATCTCTATCCCGCTGGCGGCCTACTATGCC TATGCCGCGCCTTTCATCGCGGCGACCGGTTTCAGCAATGTCGGCGGGGTGATGTCGCTGGGGCAGATGTCCGAACTGTT CTTTATGCTGCTGATCCCGTTTCTGTTTGTACGGCTGGGCATCAAGGTGATGCTGTTGATTGGCATGTTGGCGTGGTTCC TGCGCTACGTGATGTTTGCGCTGGGGATTACCGAAGAACTGCGCTGGATGATTTACCTCGGCATCATTCTGCACGGTATG TGCTACGACTTCTTTTTCGTGATCGGTTTTATCTACACCGACAAGGTGGCCGGTGACAAGGTCAAGGGCCAGGCCCAGAG TCTGCTGGTGTTGTTCACCTATGGTCTGGGCATGTTGATCGGTTCGCAAATCAGCGGTGCACTGTTCAATCGTTTGGTGA CGGCGGAAGGGGCGGCAGCGCTGCCACAGTGGCAGAGTTTCTGGTGGTATCCGGCCATCGGTGCGCTGGCGATCGCGGCA CTGTTCTTCTTCACCTTCAATTACCGGGAAATCCCGCAGGGGGAGAAACGCGATGACTGA
Upstream 100 bases:
>100_bases CAGGTGAAAGGCCGTGCGCTACAACCCGGCGGTGTGGTTATGCCGTCCTTCCTGCCGGAAAGCGGTTAGACAACACCACA ACAAGACCAATGGGGGAATT
Downstream 100 bases:
>100_bases TTTGCGTGTGCTGGTGGTGGGCTGCGGCAATATGGGGGCTTCACATGCTGAAGCCTATCACGATATGGACGGCGTCGAGA TTTGCGGCTTGGTGGCGCGC
Product: nucleoside:H symporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MQTDSAVLGTKSVTFKWVVPRLALMMFLQFFVWGAWYVTLGVVMGKFGLAAIIGDAYSTGPIASILSPFVLGMLVDRFFA SQKVLGVLHLIGAGLLWLMPGFFSSGQSGLLWIIFGYMLCYMPTIALSNNVAFYSLSNSEKAFPVVRAFGTFGWIVAGLI VGASGLSDSTGIFTLAAVASLVLAIYSFTLPHTPAPERGKPIKMRDLLCADAFAMLKQRHFLVFIICATLISIPLAAYYA YAAPFIAATGFSNVGGVMSLGQMSELFFMLLIPFLFVRLGIKVMLLIGMLAWFLRYVMFALGITEELRWMIYLGIILHGM CYDFFFVIGFIYTDKVAGDKVKGQAQSLLVLFTYGLGMLIGSQISGALFNRLVTAEGAAALPQWQSFWWYPAIGALAIAA LFFFTFNYREIPQGEKRDD
Sequences:
>Translated_419_residues MQTDSAVLGTKSVTFKWVVPRLALMMFLQFFVWGAWYVTLGVVMGKFGLAAIIGDAYSTGPIASILSPFVLGMLVDRFFA SQKVLGVLHLIGAGLLWLMPGFFSSGQSGLLWIIFGYMLCYMPTIALSNNVAFYSLSNSEKAFPVVRAFGTFGWIVAGLI VGASGLSDSTGIFTLAAVASLVLAIYSFTLPHTPAPERGKPIKMRDLLCADAFAMLKQRHFLVFIICATLISIPLAAYYA YAAPFIAATGFSNVGGVMSLGQMSELFFMLLIPFLFVRLGIKVMLLIGMLAWFLRYVMFALGITEELRWMIYLGIILHGM CYDFFFVIGFIYTDKVAGDKVKGQAQSLLVLFTYGLGMLIGSQISGALFNRLVTAEGAAALPQWQSFWWYPAIGALAIAA LFFFTFNYREIPQGEKRDD >Mature_419_residues MQTDSAVLGTKSVTFKWVVPRLALMMFLQFFVWGAWYVTLGVVMGKFGLAAIIGDAYSTGPIASILSPFVLGMLVDRFFA SQKVLGVLHLIGAGLLWLMPGFFSSGQSGLLWIIFGYMLCYMPTIALSNNVAFYSLSNSEKAFPVVRAFGTFGWIVAGLI VGASGLSDSTGIFTLAAVASLVLAIYSFTLPHTPAPERGKPIKMRDLLCADAFAMLKQRHFLVFIICATLISIPLAAYYA YAAPFIAATGFSNVGGVMSLGQMSELFFMLLIPFLFVRLGIKVMLLIGMLAWFLRYVMFALGITEELRWMIYLGIILHGM CYDFFFVIGFIYTDKVAGDKVKGQAQSLLVLFTYGLGMLIGSQISGALFNRLVTAEGAAALPQWQSFWWYPAIGALAIAA LFFFTFNYREIPQGEKRDD
Specific function: Could be involved in nucleoside transport [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788415, Length=416, Percent_Identity=38.2211538461538, Blast_Score=257, Evalue=1e-69, Organism=Escherichia coli, GI1788745, Length=414, Percent_Identity=31.6425120772947, Blast_Score=179, Evalue=3e-46, Organism=Escherichia coli, GI87082192, Length=418, Percent_Identity=29.6650717703349, Blast_Score=168, Evalue=7e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR004740 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46041; Mature: 46041
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTDSAVLGTKSVTFKWVVPRLALMMFLQFFVWGAWYVTLGVVMGKFGLAAIIGDAYSTG CCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PIASILSPFVLGMLVDRFFASQKVLGVLHLIGAGLLWLMPGFFSSGQSGLLWIIFGYMLC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHH YMPTIALSNNVAFYSLSNSEKAFPVVRAFGTFGWIVAGLIVGASGLSDSTGIFTLAAVAS HHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH LVLAIYSFTLPHTPAPERGKPIKMRDLLCADAFAMLKQRHFLVFIICATLISIPLAAYYA HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH YAAPFIAATGFSNVGGVMSLGQMSELFFMLLIPFLFVRLGIKVMLLIGMLAWFLRYVMFA HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGITEELRWMIYLGIILHGMCYDFFFVIGFIYTDKVAGDKVKGQAQSLLVLFTYGLGMLI HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH GSQISGALFNRLVTAEGAAALPQWQSFWWYPAIGALAIAALFFFTFNYREIPQGEKRDD HHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCC >Mature Secondary Structure MQTDSAVLGTKSVTFKWVVPRLALMMFLQFFVWGAWYVTLGVVMGKFGLAAIIGDAYSTG CCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PIASILSPFVLGMLVDRFFASQKVLGVLHLIGAGLLWLMPGFFSSGQSGLLWIIFGYMLC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHH YMPTIALSNNVAFYSLSNSEKAFPVVRAFGTFGWIVAGLIVGASGLSDSTGIFTLAAVAS HHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH LVLAIYSFTLPHTPAPERGKPIKMRDLLCADAFAMLKQRHFLVFIICATLISIPLAAYYA HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH YAAPFIAATGFSNVGGVMSLGQMSELFFMLLIPFLFVRLGIKVMLLIGMLAWFLRYVMFA HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGITEELRWMIYLGIILHGMCYDFFFVIGFIYTDKVAGDKVKGQAQSLLVLFTYGLGMLI HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH GSQISGALFNRLVTAEGAAALPQWQSFWWYPAIGALAIAALFFFTFNYREIPQGEKRDD HHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]