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The map label for this gene is ydgJ [C]

Identifier: 157372799

GI number: 157372799

Start: 5041665

End: 5042786

Strand: Reverse

Name: ydgJ [C]

Synonym: Spro_4567

Alternate gene names: 157372799

Gene position: 5042786-5041665 (Counterclockwise)

Preceding gene: 157372800

Following gene: 157372798

Centisome position: 92.55

GC content: 60.34

Gene sequence:

>1122_bases
ATGAGATTACGCTTGGGGATGGTCGGCGGTGGCGAAGGGGCCTTTATCGGCGCAGTGCATCGTCTGGCGGCGCGGATGGA
CGATGAGTTTGAGCTGGTAGCCGGGGCTTTCTCTGCTGATTGGGAAAACTGTCGCCGCACCGGCGAACGGCTACACCTCG
ACCCACAGCGCTGCTATCACGATTTTAAGCAGATGGCGCAGGCAGAGGCGGCGCGCGAAAACGGCATCGATGTGGTGGCT
ATCGTCACCCCCAATTATCTGCATGCGCCGGTGGCGACCGCGTTTCTTAACGCCGGCATCGACGTCATCTGCGACAAGCC
TCTGTGCAACAGCTATGCCGAGGCGTTGCAGTTGGCCGAGACGGTGCAGCGTAGCGGAAAGCAGCTGATATTGACCCATA
ACTACAGTGCCTATCCGTTGGTGCGCGAGGCGCGTAGTCGGGTATTAGCCGGTGAATTGGGGGCGATCCGCTTTATCGAG
GTGGAGTATTTGCAAGAATGGCTGGCGCAGCCGCTGGAACTGACCGACAACAAGCAGGCTGGCTGGCGTTCCCAGCCAGA
AAAGGCCGGGGCCGGCTGTATTGGTGATGTGGGTACCCATGCCTGGCAGTTGGCGCACTTTGTCAGCGGCCTGTTGCCGC
AGGCGATCAGCACCGAACTCACTGCGTTTATTGCTGGGCGCCAGATAGACGACGATGTGCGGGTGCAGATGCGCTACGCC
AACGGTGCCAGAGGCCGACTGTGGGCCAGTCAGGTGGCTTGTGGCCATGAGAACGGCCTGCGGTTGAGAGTCTATGGTAG
CGACGGCAGCCTGGAATTTTGTCAGGAACAACCGAATCAGCTGTGGATGCGGCCCCGGGATGCGCCAGCCTATTGCATAA
CCCGCGCCTCTTCATTCCAGTATGTGGAGAACCGTTCACTGGCACGGGTACCGGCAGGGCATCCTGAAGGCTATCTGGAA
GGATTTGGTCAGATTTACCGCGAGGCGGCGGCACGATTGCGGGATGGGCCGCAGGCGGCCCCCCTGTTACCGGGGATTGA
GACCGGGGTGCAGGGCATGGCATTTATCGATGCTGCCCAACGTAGCAGTGCTGCCGGCGGGCAATGGATCGACCTGAATT
AA

Upstream 100 bases:

>100_bases
GCCATATTATTCCAGTCGCTGAGAGGGCGTTTGATGATTTTGCCGCCGTCGGCGGTGAACGCAAACAGGTCAGACAGATG
TTGGGTGTGGGAGAGCAACC

Downstream 100 bases:

>100_bases
TTTATATTCCCATAAGTAATAACGCAGTTTTTTTTATTCTTTTATAGCTCGTCACCGCTCAGATAAAACTGTCAGCAACT
GAACAGACTTTTATCAACGG

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MRLRLGMVGGGEGAFIGAVHRLAARMDDEFELVAGAFSADWENCRRTGERLHLDPQRCYHDFKQMAQAEAARENGIDVVA
IVTPNYLHAPVATAFLNAGIDVICDKPLCNSYAEALQLAETVQRSGKQLILTHNYSAYPLVREARSRVLAGELGAIRFIE
VEYLQEWLAQPLELTDNKQAGWRSQPEKAGAGCIGDVGTHAWQLAHFVSGLLPQAISTELTAFIAGRQIDDDVRVQMRYA
NGARGRLWASQVACGHENGLRLRVYGSDGSLEFCQEQPNQLWMRPRDAPAYCITRASSFQYVENRSLARVPAGHPEGYLE
GFGQIYREAAARLRDGPQAAPLLPGIETGVQGMAFIDAAQRSSAAGGQWIDLN

Sequences:

>Translated_373_residues
MRLRLGMVGGGEGAFIGAVHRLAARMDDEFELVAGAFSADWENCRRTGERLHLDPQRCYHDFKQMAQAEAARENGIDVVA
IVTPNYLHAPVATAFLNAGIDVICDKPLCNSYAEALQLAETVQRSGKQLILTHNYSAYPLVREARSRVLAGELGAIRFIE
VEYLQEWLAQPLELTDNKQAGWRSQPEKAGAGCIGDVGTHAWQLAHFVSGLLPQAISTELTAFIAGRQIDDDVRVQMRYA
NGARGRLWASQVACGHENGLRLRVYGSDGSLEFCQEQPNQLWMRPRDAPAYCITRASSFQYVENRSLARVPAGHPEGYLE
GFGQIYREAAARLRDGPQAAPLLPGIETGVQGMAFIDAAQRSSAAGGQWIDLN
>Mature_373_residues
MRLRLGMVGGGEGAFIGAVHRLAARMDDEFELVAGAFSADWENCRRTGERLHLDPQRCYHDFKQMAQAEAARENGIDVVA
IVTPNYLHAPVATAFLNAGIDVICDKPLCNSYAEALQLAETVQRSGKQLILTHNYSAYPLVREARSRVLAGELGAIRFIE
VEYLQEWLAQPLELTDNKQAGWRSQPEKAGAGCIGDVGTHAWQLAHFVSGLLPQAISTELTAFIAGRQIDDDVRVQMRYA
NGARGRLWASQVACGHENGLRLRVYGSDGSLEFCQEQPNQLWMRPRDAPAYCITRASSFQYVENRSLARVPAGHPEGYLE
GFGQIYREAAARLRDGPQAAPLLPGIETGVQGMAFIDAAQRSSAAGGQWIDLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Drosophila melanogaster, GI24581117, Length=247, Percent_Identity=25.5060728744939, Blast_Score=69, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 40955; Mature: 40955

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLRLGMVGGGEGAFIGAVHRLAARMDDEFELVAGAFSADWENCRRTGERLHLDPQRCYH
CEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHCHHHCCCCHHHHHH
DFKQMAQAEAARENGIDVVAIVTPNYLHAPVATAFLNAGIDVICDKPLCNSYAEALQLAE
HHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHH
TVQRSGKQLILTHNYSAYPLVREARSRVLAGELGAIRFIEVEYLQEWLAQPLELTDNKQA
HHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCCCCCCCC
GWRSQPEKAGAGCIGDVGTHAWQLAHFVSGLLPQAISTELTAFIAGRQIDDDVRVQMRYA
CCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC
NGARGRLWASQVACGHENGLRLRVYGSDGSLEFCQEQPNQLWMRPRDAPAYCITRASSFQ
CCCCCCHHHHHHCCCCCCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCEEECCCCHH
YVENRSLARVPAGHPEGYLEGFGQIYREAAARLRDGPQAAPLLPGIETGVQGMAFIDAAQ
HHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHHHHH
RSSAAGGQWIDLN
HCCCCCCEEEECC
>Mature Secondary Structure
MRLRLGMVGGGEGAFIGAVHRLAARMDDEFELVAGAFSADWENCRRTGERLHLDPQRCYH
CEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHCHHHCCCCHHHHHH
DFKQMAQAEAARENGIDVVAIVTPNYLHAPVATAFLNAGIDVICDKPLCNSYAEALQLAE
HHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHH
TVQRSGKQLILTHNYSAYPLVREARSRVLAGELGAIRFIEVEYLQEWLAQPLELTDNKQA
HHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCCCCCCCC
GWRSQPEKAGAGCIGDVGTHAWQLAHFVSGLLPQAISTELTAFIAGRQIDDDVRVQMRYA
CCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC
NGARGRLWASQVACGHENGLRLRVYGSDGSLEFCQEQPNQLWMRPRDAPAYCITRASSFQ
CCCCCCHHHHHHCCCCCCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCEEECCCCHH
YVENRSLARVPAGHPEGYLEGFGQIYREAAARLRDGPQAAPLLPGIETGVQGMAFIDAAQ
HHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHHHHH
RSSAAGGQWIDLN
HCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]