| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is plsB
Identifier: 157372695
GI number: 157372695
Start: 4933206
End: 4935671
Strand: Direct
Name: plsB
Synonym: Spro_4462
Alternate gene names: 157372695
Gene position: 4933206-4935671 (Clockwise)
Preceding gene: 157372690
Following gene: 157372698
Centisome position: 90.54
GC content: 56.41
Gene sequence:
>2466_bases ATGTCAGGTTGGCGTAAAATTTATTATAAACTATTGAATTTACCACTCAAACTGTTGGTAAGAAGTAAGGTTATCCCTTC AGATCCGGTCACGGAGTTAGGGTTGGATCCCTCACGGCCGATTTTGTATGTTTTACCTTATAATTCCAAGGCGGATTTGC TGACGCTGCGCACCCAGTGCCTGGCGCAAGATCTGCCCGACCCCCTCAATCCGCTGGAGATAGACGGCACCGTGCTGCCA AGCCACGTGTTTATTCACGACGGCCCGCGCGTATTCCGCTACTACACGCCGAAAGAAGAGTCGGTAAAACTGTTCCACGA CTATCTGGACCTGCACCGCAGTAATCCGGATCTCGACATTCAGATGCTGCCGGTTTCGGTGATGTTTGGCCGCTCTCCGG GGCGCGAAGGTCACGGCACACCGCATCTGCGTCTGCTGAATGGCGTGCAGAAATTCTTCGCCGTGCTGTGGCTCGGCCGC GACAGCTTTGTCCGTTTTTCCAATACCGTTTCGCTGCGCCGCATGGCCACCGAGCACGGTACGGACAAAATCATTGCGCA GAAACTGGCTCGCGTAGCGCGCATGCACTTCTCGCGTCAGCGTCTGGCCGCCGTCGGCCCAAGCCTGCCGGCCCGTCAGG ACCTGTTCAACAAACTGTTGGCGTCCAAGGCGATCGAAAAAGCGGTCGAGGACGAAGCTCGCAGCAAGAAGATTTCCCAC GAAAAAGCCCAGCAGAATGCCATTGCGCTGATGGAAGAGATCGCTGCCGACTTCTCTTACGAGACGGTGCGCCTTTCCGA TCGCGTGCTGAGCTGGACCTGGAACAGACTGTATCAAGGTATCAACGTCACGAACGCAGAACGCGTGCGTCAGTTGGCGC AGGACGGCCACGAGATTGTTTATGTGCCCTGCCACCGCAGCCACATGGACTACCTTCTGCTGTCCTACGTGCTGTATCAC CAGGGTCTGGTACCGCCGCACATTGCTGCCGGTATCAATCTCAACTTCTGGCCGGCCGGGCCGATCTTCCGTCGCCTGGG CGCTTTCTTTATCCGCCGCACTTTCAAAGGCAACAAGCTGTACTCGACGGTATTCCGTGAATACCTCGGCGAGCTGTTTA CCCGCGGTTACTCGGTGGAATACTTTGTTGAAGGTGGCCGTTCCCGTACCGGACGTTTACTGGAACCGAAGACCGGCACC CTGTCGATGACCATTCAGGCGATGCTGCGCGGCGGTAGCCGTCCTATCACACTGGTGCCGATTTACATCGGTTACGAACA CGTGATGGAAGTGGGTACCTACGCCAAAGAGTTGCGTGGCGCGACCAAGGAAAAAGAGAGCCTGTTGCAGATGCTGCGCG GCCTGCGCAAGCTGCGTAATCTCGGCCAGGGTTACGTCAACTTTGGTGATCCACTGCCGTTGACCGCTTACCTGAACCAG AATGTGCCACAGTGGCGCGAATCCATTGACCCGATCGAAGCCCAGCGCCCAAGCTGGTTAACGCCGACGGTCAACGATTT GGCGGCCAAGATCATGGTGCGCATCAACAATGCCGCCGCCGCCAACGCCATGAACCTGTGTTCCACGGCGCTGCTGGCCT CACGCCAACGCTCGCTGACCCGCGAGCAGTTGCTTGAGCAGTTGGAATGCTACCTGCAACTGATGCGCAATGTGCCTTAT GCCGGTGACGTTACCGTACCAACCCAAACGCCGGATGAGCTGCTGGATCATGCGCTGAACATGAACAAGTTCGAGGTGGA GAAGGATAACATCGGCGATATCATCATCCTGCCGCGCGAGCAGGCGGTGTTGATGACCTATTACCGTAACAATATCCATC ATCTGTTGGTTCTGCCATCGCTGATCGCCACTATCGTGATGCATCACCGCCGGGTATCGCGCGCTGAACTGCTAAGGCAG ATTGGCCTGATTTACCCAATGCTGAAGGCTGAACTGTTCCTGCATAACGACAAGGAACAACTGCCGGAAGTGCTACGGCC ACTGATCGACGAAATGATCCGTCAGCAACTGATCTGCGATAAGGGTGACGATCTGGTGTTGAATCCGGCACGCATCCGTC CATTGCAGTTGTTGGCCGCCGGTGTCCGCGAAACGCTGCAGCGCTATGCCATCACCATGTCGATCCTCAGTGCCAATCCA AGCATCAACCGCGGTGCGCTGGAGAAAGAGAGCCGTATTATGGCCCAGCGTCTGTCGGTGCTGCATGGCATCAACGCGCC GGAGTTCTTCGACAAGGCGGTGTTCTCCACCCTGGTGGCGACGCTGCGTGCAGAAGGCTACATCAATGACATCGGCGATG CGGTCCGTGAGCACACCATGGAGGTCTACAACATGCTGAGCGATTTGATTACCCCGGAAATCAAGCTGACCATTGAGAGC GTCAGTATGCCGGCGGAAACCAACGCGTTGCCGGAAACGGTCGCAGCGGAAGAGAAAGAAGACTAA
Upstream 100 bases:
>100_bases CAGGAAACTCTCCCGGCTCTCGGTTTTCCAACACCACAGATCTGCTACCCGGTTTCTGGTATGCTTGCGGCGCATTGCTA ACAAGAGGCTTCACGTTGTT
Downstream 100 bases:
>100_bases TCCATTGATACAAAACAAAAAGGCACCCTAGGGTGCCTTTTTTATTGCGGTAACGCCTTAACCCTGCCAGTAACTCAGAG CAATACCGATAAACAACACC
Product: glycerol-3-phosphate acyltransferase
Products: NA
Alternate protein names: GPAT
Number of amino acids: Translated: 821; Mature: 820
Protein sequence:
>821_residues MSGWRKIYYKLLNLPLKLLVRSKVIPSDPVTELGLDPSRPILYVLPYNSKADLLTLRTQCLAQDLPDPLNPLEIDGTVLP SHVFIHDGPRVFRYYTPKEESVKLFHDYLDLHRSNPDLDIQMLPVSVMFGRSPGREGHGTPHLRLLNGVQKFFAVLWLGR DSFVRFSNTVSLRRMATEHGTDKIIAQKLARVARMHFSRQRLAAVGPSLPARQDLFNKLLASKAIEKAVEDEARSKKISH EKAQQNAIALMEEIAADFSYETVRLSDRVLSWTWNRLYQGINVTNAERVRQLAQDGHEIVYVPCHRSHMDYLLLSYVLYH QGLVPPHIAAGINLNFWPAGPIFRRLGAFFIRRTFKGNKLYSTVFREYLGELFTRGYSVEYFVEGGRSRTGRLLEPKTGT LSMTIQAMLRGGSRPITLVPIYIGYEHVMEVGTYAKELRGATKEKESLLQMLRGLRKLRNLGQGYVNFGDPLPLTAYLNQ NVPQWRESIDPIEAQRPSWLTPTVNDLAAKIMVRINNAAAANAMNLCSTALLASRQRSLTREQLLEQLECYLQLMRNVPY AGDVTVPTQTPDELLDHALNMNKFEVEKDNIGDIIILPREQAVLMTYYRNNIHHLLVLPSLIATIVMHHRRVSRAELLRQ IGLIYPMLKAELFLHNDKEQLPEVLRPLIDEMIRQQLICDKGDDLVLNPARIRPLQLLAAGVRETLQRYAITMSILSANP SINRGALEKESRIMAQRLSVLHGINAPEFFDKAVFSTLVATLRAEGYINDIGDAVREHTMEVYNMLSDLITPEIKLTIES VSMPAETNALPETVAAEEKED
Sequences:
>Translated_821_residues MSGWRKIYYKLLNLPLKLLVRSKVIPSDPVTELGLDPSRPILYVLPYNSKADLLTLRTQCLAQDLPDPLNPLEIDGTVLP SHVFIHDGPRVFRYYTPKEESVKLFHDYLDLHRSNPDLDIQMLPVSVMFGRSPGREGHGTPHLRLLNGVQKFFAVLWLGR DSFVRFSNTVSLRRMATEHGTDKIIAQKLARVARMHFSRQRLAAVGPSLPARQDLFNKLLASKAIEKAVEDEARSKKISH EKAQQNAIALMEEIAADFSYETVRLSDRVLSWTWNRLYQGINVTNAERVRQLAQDGHEIVYVPCHRSHMDYLLLSYVLYH QGLVPPHIAAGINLNFWPAGPIFRRLGAFFIRRTFKGNKLYSTVFREYLGELFTRGYSVEYFVEGGRSRTGRLLEPKTGT LSMTIQAMLRGGSRPITLVPIYIGYEHVMEVGTYAKELRGATKEKESLLQMLRGLRKLRNLGQGYVNFGDPLPLTAYLNQ NVPQWRESIDPIEAQRPSWLTPTVNDLAAKIMVRINNAAAANAMNLCSTALLASRQRSLTREQLLEQLECYLQLMRNVPY AGDVTVPTQTPDELLDHALNMNKFEVEKDNIGDIIILPREQAVLMTYYRNNIHHLLVLPSLIATIVMHHRRVSRAELLRQ IGLIYPMLKAELFLHNDKEQLPEVLRPLIDEMIRQQLICDKGDDLVLNPARIRPLQLLAAGVRETLQRYAITMSILSANP SINRGALEKESRIMAQRLSVLHGINAPEFFDKAVFSTLVATLRAEGYINDIGDAVREHTMEVYNMLSDLITPEIKLTIES VSMPAETNALPETVAAEEKED >Mature_820_residues SGWRKIYYKLLNLPLKLLVRSKVIPSDPVTELGLDPSRPILYVLPYNSKADLLTLRTQCLAQDLPDPLNPLEIDGTVLPS HVFIHDGPRVFRYYTPKEESVKLFHDYLDLHRSNPDLDIQMLPVSVMFGRSPGREGHGTPHLRLLNGVQKFFAVLWLGRD SFVRFSNTVSLRRMATEHGTDKIIAQKLARVARMHFSRQRLAAVGPSLPARQDLFNKLLASKAIEKAVEDEARSKKISHE KAQQNAIALMEEIAADFSYETVRLSDRVLSWTWNRLYQGINVTNAERVRQLAQDGHEIVYVPCHRSHMDYLLLSYVLYHQ GLVPPHIAAGINLNFWPAGPIFRRLGAFFIRRTFKGNKLYSTVFREYLGELFTRGYSVEYFVEGGRSRTGRLLEPKTGTL SMTIQAMLRGGSRPITLVPIYIGYEHVMEVGTYAKELRGATKEKESLLQMLRGLRKLRNLGQGYVNFGDPLPLTAYLNQN VPQWRESIDPIEAQRPSWLTPTVNDLAAKIMVRINNAAAANAMNLCSTALLASRQRSLTREQLLEQLECYLQLMRNVPYA GDVTVPTQTPDELLDHALNMNKFEVEKDNIGDIIILPREQAVLMTYYRNNIHHLLVLPSLIATIVMHHRRVSRAELLRQI GLIYPMLKAELFLHNDKEQLPEVLRPLIDEMIRQQLICDKGDDLVLNPARIRPLQLLAAGVRETLQRYAITMSILSANPS INRGALEKESRIMAQRLSVLHGINAPEFFDKAVFSTLVATLRAEGYINDIGDAVREHTMEVYNMLSDLITPEIKLTIESV SMPAETNALPETVAAEEKED
Specific function: De novo phospholipid biosynthesis; first step. [C]
COG id: COG2937
COG function: function code I; Glycerol-3-phosphate O-acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GPAT/DAPAT family
Homologues:
Organism=Homo sapiens, GI7657134, Length=443, Percent_Identity=28.8939051918736, Blast_Score=158, Evalue=3e-38, Organism=Homo sapiens, GI190358539, Length=239, Percent_Identity=33.4728033472803, Blast_Score=123, Evalue=7e-28, Organism=Escherichia coli, GI87082362, Length=803, Percent_Identity=81.4445828144458, Blast_Score=1337, Evalue=0.0, Organism=Caenorhabditis elegans, GI71988723, Length=272, Percent_Identity=33.8235294117647, Blast_Score=148, Evalue=9e-36, Organism=Caenorhabditis elegans, GI25147672, Length=278, Percent_Identity=30.5755395683453, Blast_Score=141, Evalue=1e-33, Organism=Caenorhabditis elegans, GI71988728, Length=190, Percent_Identity=38.4210526315789, Blast_Score=135, Evalue=8e-32, Organism=Drosophila melanogaster, GI17864692, Length=276, Percent_Identity=30.4347826086957, Blast_Score=149, Evalue=5e-36, Organism=Drosophila melanogaster, GI24650752, Length=486, Percent_Identity=25.3086419753086, Blast_Score=138, Evalue=2e-32, Organism=Drosophila melanogaster, GI21357731, Length=486, Percent_Identity=25.3086419753086, Blast_Score=138, Evalue=2e-32, Organism=Drosophila melanogaster, GI24650754, Length=486, Percent_Identity=25.3086419753086, Blast_Score=138, Evalue=2e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PLSB_SERP5 (A8GKB6)
Other databases:
- EMBL: CP000826 - RefSeq: YP_001480684.1 - STRING: A8GKB6 - GeneID: 5602699 - GenomeReviews: CP000826_GR - KEGG: spe:Spro_4462 - eggNOG: COG2937 - HOGENOM: HBG296590 - OMA: VIYVPCH - ProtClustDB: PRK04974 - BioCyc: SPRO399741:SPRO_4462-MONOMER - HAMAP: MF_00393 - InterPro: IPR002123 - InterPro: IPR022284 - SMART: SM00563 - TIGRFAMs: TIGR03703
Pfam domain/function: PF01553 Acyltransferase
EC number: =2.3.1.15
Molecular weight: Translated: 93298; Mature: 93167
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGWRKIYYKLLNLPLKLLVRSKVIPSDPVTELGLDPSRPILYVLPYNSKADLLTLRTQC CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCEEEEECCCCCCHHHHHHHHH LAQDLPDPLNPLEIDGTVLPSHVFIHDGPRVFRYYTPKEESVKLFHDYLDLHRSNPDLDI HHHHCCCCCCCEECCCEECCCEEEEECCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEE QMLPVSVMFGRSPGREGHGTPHLRLLNGVQKFFAVLWLGRDSFVRFSNTVSLRRMATEHG EEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC TDKIIAQKLARVARMHFSRQRLAAVGPSLPARQDLFNKLLASKAIEKAVEDEARSKKISH HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKAQQNAIALMEEIAADFSYETVRLSDRVLSWTWNRLYQGINVTNAERVRQLAQDGHEIV HHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEE YVPCHRSHMDYLLLSYVLYHQGLVPPHIAAGINLNFWPAGPIFRRLGAFFIRRTFKGNKL EECCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHH YSTVFREYLGELFTRGYSVEYFVEGGRSRTGRLLEPKTGTLSMTIQAMLRGGSRPITLVP HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEECCCCCCHHHHHHHHHCCCCCCEEEEE IYIGYEHVMEVGTYAKELRGATKEKESLLQMLRGLRKLRNLGQGYVNFGDPLPLTAYLNQ EECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCC NVPQWRESIDPIEAQRPSWLTPTVNDLAAKIMVRINNAAAANAMNLCSTALLASRQRSLT CCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHH REQLLEQLECYLQLMRNVPYAGDVTVPTQTPDELLDHALNMNKFEVEKDNIGDIIILPRE HHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHCCCCCEEECCCCCCCEEEECCC QAVLMTYYRNNIHHLLVLPSLIATIVMHHRRVSRAELLRQIGLIYPMLKAELFLHNDKEQ CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LPEVLRPLIDEMIRQQLICDKGDDLVLNPARIRPLQLLAAGVRETLQRYAITMSILSANP HHHHHHHHHHHHHHHHHHCCCCCCEEECCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC SINRGALEKESRIMAQRLSVLHGINAPEFFDKAVFSTLVATLRAEGYINDIGDAVREHTM CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH EVYNMLSDLITPEIKLTIESVSMPAETNALPETVAAEEKED HHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHCCCCCCC >Mature Secondary Structure SGWRKIYYKLLNLPLKLLVRSKVIPSDPVTELGLDPSRPILYVLPYNSKADLLTLRTQC CHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCEEEEECCCCCCHHHHHHHHH LAQDLPDPLNPLEIDGTVLPSHVFIHDGPRVFRYYTPKEESVKLFHDYLDLHRSNPDLDI HHHHCCCCCCCEECCCEECCCEEEEECCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEE QMLPVSVMFGRSPGREGHGTPHLRLLNGVQKFFAVLWLGRDSFVRFSNTVSLRRMATEHG EEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC TDKIIAQKLARVARMHFSRQRLAAVGPSLPARQDLFNKLLASKAIEKAVEDEARSKKISH HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKAQQNAIALMEEIAADFSYETVRLSDRVLSWTWNRLYQGINVTNAERVRQLAQDGHEIV HHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEE YVPCHRSHMDYLLLSYVLYHQGLVPPHIAAGINLNFWPAGPIFRRLGAFFIRRTFKGNKL EECCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHH YSTVFREYLGELFTRGYSVEYFVEGGRSRTGRLLEPKTGTLSMTIQAMLRGGSRPITLVP HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEECCCCCCHHHHHHHHHCCCCCCEEEEE IYIGYEHVMEVGTYAKELRGATKEKESLLQMLRGLRKLRNLGQGYVNFGDPLPLTAYLNQ EECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCC NVPQWRESIDPIEAQRPSWLTPTVNDLAAKIMVRINNAAAANAMNLCSTALLASRQRSLT CCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHH REQLLEQLECYLQLMRNVPYAGDVTVPTQTPDELLDHALNMNKFEVEKDNIGDIIILPRE HHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHCCCCCEEECCCCCCCEEEECCC QAVLMTYYRNNIHHLLVLPSLIATIVMHHRRVSRAELLRQIGLIYPMLKAELFLHNDKEQ CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LPEVLRPLIDEMIRQQLICDKGDDLVLNPARIRPLQLLAAGVRETLQRYAITMSILSANP HHHHHHHHHHHHHHHHHHCCCCCCEEECCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC SINRGALEKESRIMAQRLSVLHGINAPEFFDKAVFSTLVATLRAEGYINDIGDAVREHTM CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH EVYNMLSDLITPEIKLTIESVSMPAETNALPETVAAEEKED HHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA