| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yhbJ [C]
Identifier: 157372603
GI number: 157372603
Start: 4838543
End: 4839397
Strand: Direct
Name: yhbJ [C]
Synonym: Spro_4370
Alternate gene names: 157372603
Gene position: 4838543-4839397 (Clockwise)
Preceding gene: 157372602
Following gene: 157372604
Centisome position: 88.8
GC content: 56.37
Gene sequence:
>855_bases ATGGTGCTGATGATTGTCAGCGGCCGTTCCGGTTCAGGGAAATCCGTCGCCTTACGGGCGCTGGAAGACATGGGTTTTTA CTGCGTTGATAACCTGCCCGTGGTACTGCTGCCGCAGCTTGCCAATACGCTGGCGGAACGCAATAGCTCCGCTGCGGTAA GCATCGACGTACGTAACATGCCGGAATCGCCGGAAGTGTTTGAATATGCGATGACTCAACTGCCGGACAGTTTTTCGCCG CAGTTGCTGTTCCTCGATGCCGATCGTAATACGCTGATTCGCCGCTACAGTGATACTCGCCGTCTGCACCCGCTATCGAG CAAGAACCTGTCGCTGGAAAGCGCCATCGATGAAGAGAGCGACCTGCTTGAGCCACTGCGCTCCAGGGCCGATCTGATCA TCGATACCTCAGAAATGTCAGTGCATGAACTGGCCGAAATGCTGCGTACCCGCCTGTTGGGCAAACGCGAGCGCGAACTG ACCATGGTGTTCGAATCCTTTGGTTTCAAGCACGGTATTCCAATCGACGCCGATTACGTGTTCGACGTGCGCTTCCTGCC TAACCCGCACTGGGATCCGAAACTGCGCCCGATGACCGGTCTGGATAAACCCGTCGCCTCATTCCTCGATCGCCACACCG AAGTGCACAACTTTATCTACCAGACCCGCAGCTATCTCGAACAGTGGTTGCCGATGCTGGAAACCAACAACCGCAGCTAC CTGACGGTCGCCATTGGCTGTACCGGCGGTAAGCACCGTTCAGTCTACGTAGCAGAACAGCTGGCCGACTACTTCCGCTC ACGCGGCAAAAACGTGCAGTCGCGCCACCGCACGCTGGAAAAACGCAAACAATGA
Upstream 100 bases:
>100_bases ACGATACTGTTTAGCCACGATGGATCCCGGTTCGGACAGGGATCCTAAAGTTTCTAACGGTGGCGATAAACGCCACTGAG ATGCCAGGGGGAGTTGCCAC
Downstream 100 bases:
>100_bases CGGTCAAACAAACGGTTGAAATCAAAAACAAGCTGGGGATGCACGCGCGCCCGGCGATGAAGCTGTTTGAGCTGGTGCAG AGCTTTGATGCCGAGGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPQLANTLAERNSSAAVSIDVRNMPESPEVFEYAMTQLPDSFSP QLLFLDADRNTLIRRYSDTRRLHPLSSKNLSLESAIDEESDLLEPLRSRADLIIDTSEMSVHELAEMLRTRLLGKREREL TMVFESFGFKHGIPIDADYVFDVRFLPNPHWDPKLRPMTGLDKPVASFLDRHTEVHNFIYQTRSYLEQWLPMLETNNRSY LTVAIGCTGGKHRSVYVAEQLADYFRSRGKNVQSRHRTLEKRKQ
Sequences:
>Translated_284_residues MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPQLANTLAERNSSAAVSIDVRNMPESPEVFEYAMTQLPDSFSP QLLFLDADRNTLIRRYSDTRRLHPLSSKNLSLESAIDEESDLLEPLRSRADLIIDTSEMSVHELAEMLRTRLLGKREREL TMVFESFGFKHGIPIDADYVFDVRFLPNPHWDPKLRPMTGLDKPVASFLDRHTEVHNFIYQTRSYLEQWLPMLETNNRSY LTVAIGCTGGKHRSVYVAEQLADYFRSRGKNVQSRHRTLEKRKQ >Mature_284_residues MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPQLANTLAERNSSAAVSIDVRNMPESPEVFEYAMTQLPDSFSP QLLFLDADRNTLIRRYSDTRRLHPLSSKNLSLESAIDEESDLLEPLRSRADLIIDTSEMSVHELAEMLRTRLLGKREREL TMVFESFGFKHGIPIDADYVFDVRFLPNPHWDPKLRPMTGLDKPVASFLDRHTEVHNFIYQTRSYLEQWLPMLETNNRSY LTVAIGCTGGKHRSVYVAEQLADYFRSRGKNVQSRHRTLEKRKQ
Specific function: Displays ATPase and GTPase activities [H]
COG id: COG1660
COG function: function code R; Predicted P-loop-containing kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0042 family [H]
Homologues:
Organism=Escherichia coli, GI1789598, Length=283, Percent_Identity=94.6996466431095, Blast_Score=556, Evalue=1e-160,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005337 [H]
Pfam domain/function: PF03668 ATP_bind_2 [H]
EC number: NA
Molecular weight: Translated: 32565; Mature: 32565
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPQLANTLAERNSSAAVSIDVRNM CEEEEEECCCCCCCHHHHHHHHHCCEEEECCCCEEEHHHHHHHHHHCCCCCEEEEEECCC PESPEVFEYAMTQLPDSFSPQLLFLDADRNTLIRRYSDTRRLHPLSSKNLSLESAIDEES CCCHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHH DLLEPLRSRADLIIDTSEMSVHELAEMLRTRLLGKRERELTMVFESFGFKHGIPIDADYV HHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCEE FDVRFLPNPHWDPKLRPMTGLDKPVASFLDRHTEVHNFIYQTRSYLEQWLPMLETNNRSY EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE LTVAIGCTGGKHRSVYVAEQLADYFRSRGKNVQSRHRTLEKRKQ EEEEEECCCCCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPQLANTLAERNSSAAVSIDVRNM CEEEEEECCCCCCCHHHHHHHHHCCEEEECCCCEEEHHHHHHHHHHCCCCCEEEEEECCC PESPEVFEYAMTQLPDSFSPQLLFLDADRNTLIRRYSDTRRLHPLSSKNLSLESAIDEES CCCHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHH DLLEPLRSRADLIIDTSEMSVHELAEMLRTRLLGKRERELTMVFESFGFKHGIPIDADYV HHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCEE FDVRFLPNPHWDPKLRPMTGLDKPVASFLDRHTEVHNFIYQTRSYLEQWLPMLETNNRSY EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE LTVAIGCTGGKHRSVYVAEQLADYFRSRGKNVQSRHRTLEKRKQ EEEEEECCCCCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA