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The map label for this gene is yhcM [H]

Identifier: 157372583

GI number: 157372583

Start: 4821951

End: 4823081

Strand: Reverse

Name: yhcM [H]

Synonym: Spro_4350

Alternate gene names: 157372583

Gene position: 4823081-4821951 (Counterclockwise)

Preceding gene: 157372587

Following gene: 157372582

Centisome position: 88.52

GC content: 56.23

Gene sequence:

>1131_bases
ATGCAGGCACAATCACCGTTATCACGCTACCAGCGGCTGCTTGCTGCGGGAGAATACCAGGCCGATGAAGTCCAGATGGA
GGCCGTGACTCAACTGGATCATATCTATCAGGCATTATTGCAGCAGACGCCCGTTGTCAGTGCGCCGGCCGCGGGCCTGC
GCGGCAAACTGAATCGTTGGCTGGGCAAGAGCAGTGAAACGACTCAGCAGCGTCCGGTTCAGGGCTTATATATGTGGGGC
GGCGTGGGACGCGGCAAAACCTGGCTGATGGACATGTTCTTCCATAGCCTGCCGGGGGAGCGCAAGCTGCGGCTGCATTT
TCACCGTTTTATGCTGCGGGTGCACGAAGAGCTGACCGAACTGCAGGGGCAGGAAAACCCACTTGAAATCATCGCGGATG
GTTTCAAGGCACAGACCGATGTGCTGTGTTTCGACGAGTTCTTTGTTTCCGATATTACCGACGCCATGTTGTTGGCAACG
TTGTTGCAGGCGCTGTTTGCCCGTGGCATTACGCTGGTGGCGACCTCCAATATCCCGCCGAACGATTTGTACCGCAACGG
CCTGCAGCGGGCGCGTTTCCTGCCGGCGATCGATCTGATTAACGAATTCTGTGACGTGATGAACGTTGACGCCGGCATTG
ATTATCGCCTGCGTACTTTGACTCAGGCGCATTTGTACCTGACGCCGCTTGATGAACAGACCCGGCTGACCATGGACCGG
ATGTTTGTGAAGCTGGCCGGCAAGCCAGGAGAGGCGGCACCGGTATTACAGATCAATCATCGGCCGTTGCAGGCGATCAA
CGCGGTAGACGGCGTGCTGGCGGTCGATTTTCACACGTTGTGCGAAGAGGCGCGTAGCCAATTGGACTATATTGCGCTGT
CGCGCCTGTATCACAGCGTGATCCTGTATAATGTGCGGGTGATGGGGCCGCTGAAGGAAAATACCGCGCGCCGCTTCCTG
GCATTGGTCGATGAATTTTACGAACGTCACGTCAAACTGGTGATCGCTGCCGAAGCGTCGATGTTCGATATTTACCAGGG
TGAGCGGTTGAAGTTCGAGTACCAGCGTTGTCTGTCGCGGCTGCAAGAAATGCAGAGTGAAGAGTATCTGAAGTTGCCGC
ATCTGCCGTGA

Upstream 100 bases:

>100_bases
CCTGAGCGGGTATTTGTAGCGATAAGGGCGCGAAGCCACCCAAAGTTGCCGCGAAAATGGGCTAAATAATTTCTAAGCGT
TGTGAAGGAACATCGAACAG

Downstream 100 bases:

>100_bases
CGTCCAGGGGGACCCAGGCCACTGGCGTCCCCGGTTTTCTGCCATTGGCGTTTAATTGCGTTTCTATTCAAAAAGCGTTC
GATCTTTGTGAGCGACTTCT

Product: AFG1 family ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MQAQSPLSRYQRLLAAGEYQADEVQMEAVTQLDHIYQALLQQTPVVSAPAAGLRGKLNRWLGKSSETTQQRPVQGLYMWG
GVGRGKTWLMDMFFHSLPGERKLRLHFHRFMLRVHEELTELQGQENPLEIIADGFKAQTDVLCFDEFFVSDITDAMLLAT
LLQALFARGITLVATSNIPPNDLYRNGLQRARFLPAIDLINEFCDVMNVDAGIDYRLRTLTQAHLYLTPLDEQTRLTMDR
MFVKLAGKPGEAAPVLQINHRPLQAINAVDGVLAVDFHTLCEEARSQLDYIALSRLYHSVILYNVRVMGPLKENTARRFL
ALVDEFYERHVKLVIAAEASMFDIYQGERLKFEYQRCLSRLQEMQSEEYLKLPHLP

Sequences:

>Translated_376_residues
MQAQSPLSRYQRLLAAGEYQADEVQMEAVTQLDHIYQALLQQTPVVSAPAAGLRGKLNRWLGKSSETTQQRPVQGLYMWG
GVGRGKTWLMDMFFHSLPGERKLRLHFHRFMLRVHEELTELQGQENPLEIIADGFKAQTDVLCFDEFFVSDITDAMLLAT
LLQALFARGITLVATSNIPPNDLYRNGLQRARFLPAIDLINEFCDVMNVDAGIDYRLRTLTQAHLYLTPLDEQTRLTMDR
MFVKLAGKPGEAAPVLQINHRPLQAINAVDGVLAVDFHTLCEEARSQLDYIALSRLYHSVILYNVRVMGPLKENTARRFL
ALVDEFYERHVKLVIAAEASMFDIYQGERLKFEYQRCLSRLQEMQSEEYLKLPHLP
>Mature_376_residues
MQAQSPLSRYQRLLAAGEYQADEVQMEAVTQLDHIYQALLQQTPVVSAPAAGLRGKLNRWLGKSSETTQQRPVQGLYMWG
GVGRGKTWLMDMFFHSLPGERKLRLHFHRFMLRVHEELTELQGQENPLEIIADGFKAQTDVLCFDEFFVSDITDAMLLAT
LLQALFARGITLVATSNIPPNDLYRNGLQRARFLPAIDLINEFCDVMNVDAGIDYRLRTLTQAHLYLTPLDEQTRLTMDR
MFVKLAGKPGEAAPVLQINHRPLQAINAVDGVLAVDFHTLCEEARSQLDYIALSRLYHSVILYNVRVMGPLKENTARRFL
ALVDEFYERHVKLVIAAEASMFDIYQGERLKFEYQRCLSRLQEMQSEEYLKLPHLP

Specific function: Unknown

COG id: COG1485

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AFG1 ATPase family [H]

Homologues:

Organism=Homo sapiens, GI21918872, Length=414, Percent_Identity=33.5748792270531, Blast_Score=226, Evalue=4e-59,
Organism=Escherichia coli, GI1789627, Length=376, Percent_Identity=68.0851063829787, Blast_Score=527, Evalue=1e-151,
Organism=Caenorhabditis elegans, GI17505769, Length=411, Percent_Identity=31.1435523114355, Blast_Score=221, Evalue=3e-58,
Organism=Saccharomyces cerevisiae, GI6320783, Length=400, Percent_Identity=28.75, Blast_Score=147, Evalue=3e-36,
Organism=Drosophila melanogaster, GI20129913, Length=425, Percent_Identity=30.8235294117647, Blast_Score=189, Evalue=2e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005654 [H]

Pfam domain/function: PF03969 AFG1_ATPase [H]

EC number: NA

Molecular weight: Translated: 43057; Mature: 43057

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAQSPLSRYQRLLAAGEYQADEVQMEAVTQLDHIYQALLQQTPVVSAPAAGLRGKLNRW
CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
LGKSSETTQQRPVQGLYMWGGVGRGKTWLMDMFFHSLPGERKLRLHFHRFMLRVHEELTE
CCCCCCCHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
LQGQENPLEIIADGFKAQTDVLCFDEFFVSDITDAMLLATLLQALFARGITLVATSNIPP
HCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCC
NDLYRNGLQRARFLPAIDLINEFCDVMNVDAGIDYRLRTLTQAHLYLTPLDEQTRLTMDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEEEECCCHHHHHHHHH
MFVKLAGKPGEAAPVLQINHRPLQAINAVDGVLAVDFHTLCEEARSQLDYIALSRLYHSV
HHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILYNVRVMGPLKENTARRFLALVDEFYERHVKLVIAAEASMFDIYQGERLKFEYQRCLSR
HHHHHHEECCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHCCCCHHHHHHHHHHH
LQEMQSEEYLKLPHLP
HHHHCCCCCCCCCCCC
>Mature Secondary Structure
MQAQSPLSRYQRLLAAGEYQADEVQMEAVTQLDHIYQALLQQTPVVSAPAAGLRGKLNRW
CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
LGKSSETTQQRPVQGLYMWGGVGRGKTWLMDMFFHSLPGERKLRLHFHRFMLRVHEELTE
CCCCCCCHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
LQGQENPLEIIADGFKAQTDVLCFDEFFVSDITDAMLLATLLQALFARGITLVATSNIPP
HCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCC
NDLYRNGLQRARFLPAIDLINEFCDVMNVDAGIDYRLRTLTQAHLYLTPLDEQTRLTMDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEEEECCCHHHHHHHHH
MFVKLAGKPGEAAPVLQINHRPLQAINAVDGVLAVDFHTLCEEARSQLDYIALSRLYHSV
HHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILYNVRVMGPLKENTARRFLALVDEFYERHVKLVIAAEASMFDIYQGERLKFEYQRCLSR
HHHHHHEECCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHCCCCHHHHHHHHHHH
LQEMQSEEYLKLPHLP
HHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]