| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yqjE [H]
Identifier: 157372562
GI number: 157372562
Start: 4798389
End: 4798790
Strand: Direct
Name: yqjE [H]
Synonym: Spro_4329
Alternate gene names: 157372562
Gene position: 4798389-4798790 (Clockwise)
Preceding gene: 157372561
Following gene: 157372563
Centisome position: 88.06
GC content: 57.71
Gene sequence:
>402_bases ATGGCAGAACAACCGCAAGTTCGTGCACAGGGCCCCGCTAAAGGGGTCCTGGATGTCGCCCAGCGCATCATCACCATTCT GGTCGGTATGGTGGAGACCCGGGTTCGACTGGCCGTGGTCGAGCTGGAGGAGGAGAAAGCCAACCTCATTCAGTTGCTGA TTATGGCCGGTATGACCCTGTTATTCACCGCATTCGGCCTGATGAGCCTGCTGATCCTGATTTTTTGGGCCGTAGATCCC GTCTACCGTTTGATCGCGTTAGGCACGACGACCGGTGTGCTGTTGTTCCTGGCCGTGGCTGGCGCTATCTGGACACTGGT CAAAGCGCGCCGCTCCACGCTGCTGGGTGCGACACGCAATCAGTTGGAAATCGACCGTTCCGAGCTGGAAGGTGAAAAAT GA
Upstream 100 bases:
>100_bases GCCAGGCGGACGAGTATGTTCGTGATAATCCGTGGACCGGTATCGGTATCGGCGCTGCGGTCGGCGTAGTGCTGGGCGTT CTGTTAGCGCGCCGCTAATT
Downstream 100 bases:
>100_bases ATCGCCGCCGCTATCTGGAATGGAGAAAAGAGAAGTTGATTGGCAAGATCCAGCAACAAAGGCTGGATCTTGCCGAAAAC AAAGCCCTGTGGCTGGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MAEQPQVRAQGPAKGVLDVAQRIITILVGMVETRVRLAVVELEEEKANLIQLLIMAGMTLLFTAFGLMSLLILIFWAVDP VYRLIALGTTTGVLLFLAVAGAIWTLVKARRSTLLGATRNQLEIDRSELEGEK
Sequences:
>Translated_133_residues MAEQPQVRAQGPAKGVLDVAQRIITILVGMVETRVRLAVVELEEEKANLIQLLIMAGMTLLFTAFGLMSLLILIFWAVDP VYRLIALGTTTGVLLFLAVAGAIWTLVKARRSTLLGATRNQLEIDRSELEGEK >Mature_132_residues AEQPQVRAQGPAKGVLDVAQRIITILVGMVETRVRLAVVELEEEKANLIQLLIMAGMTLLFTAFGLMSLLILIFWAVDPV YRLIALGTTTGVLLFLAVAGAIWTLVKARRSTLLGATRNQLEIDRSELEGEK
Specific function: Unknown
COG id: COG5393
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789486, Length=125, Percent_Identity=66.4, Blast_Score=124, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009937 [H]
Pfam domain/function: PF07332 DUF1469 [H]
EC number: NA
Molecular weight: Translated: 14574; Mature: 14442
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEQPQVRAQGPAKGVLDVAQRIITILVGMVETRVRLAVVELEEEKANLIQLLIMAGMTL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFTAFGLMSLLILIFWAVDPVYRLIALGTTTGVLLFLAVAGAIWTLVKARRSTLLGATRN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH QLEIDRSELEGEK HHHCCHHHCCCCC >Mature Secondary Structure AEQPQVRAQGPAKGVLDVAQRIITILVGMVETRVRLAVVELEEEKANLIQLLIMAGMTL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFTAFGLMSLLILIFWAVDPVYRLIALGTTTGVLLFLAVAGAIWTLVKARRSTLLGATRN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH QLEIDRSELEGEK HHHCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]