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The map label for this gene is yqjA [H]

Identifier: 157372558

GI number: 157372558

Start: 4796278

End: 4796949

Strand: Direct

Name: yqjA [H]

Synonym: Spro_4325

Alternate gene names: 157372558

Gene position: 4796278-4796949 (Clockwise)

Preceding gene: 157372557

Following gene: 157372559

Centisome position: 88.02

GC content: 56.85

Gene sequence:

>672_bases
ATGGACATCATTAAAGAACTGTTACATGCCTTATGGCAGCAGGATTTTGAGACGCTGGCGAATCCCTCGCTGGTCTGGAC
GCTCTACGGCCTGCTGTTTTTGATTCTGTTCCTGGAAAATGGCCTGTTGCCGGCGGCGTTTCTGCCGGGTGACAGTCTGT
TGATCCTGGTTGGCGTGCTGATCGCCAAAGGCACCATGAATTTCCCGCTCACCATTTTTATCCTCACCGTCGCCGCCAGT
CTGGGGTGTTGGGTCAGTTACATACAGGGCAAGTGGCTCGGTAATACCCGAACCGTGCAGGGCTGGCTATCCCATCTGCC
GGCTCACTATCATCAGCGTGCCCATCAGTTGTTCCATCGCCACGGGCTTTCCGCTCTGCTGGTCGGCCGTTTCCTGGCGT
TTGTCCGCACTCTGCTGCCGACCATTGCCGGCCTCTCTGGCCTGAGCAACGCACGTTTCCAGTTCTTTAACTGGATGAGC
GGTCTGCTGTGGGTGGTGATCCTGACCTCACTGGGCTTTGCCTTGGGTAAAACTCCGGTGTTCCGCAAATATGAAGACCA
ACTGATGTTCTGCCTGATGCTACTGCCGCTGGTGTTGCTGGTCGCGGGGCTGGTGGGCTCGTTAATCGTGCTGTGGCGCA
AGAAACGCGCCGATCAGGGGAAAGGGGCGTGA

Upstream 100 bases:

>100_bases
GTTTCATCATTATCAGCAGCCAGGATCGCCCGCGCGCTCTGCGTCCACTCCCGATCCGCCGCTGAGACAAAAACAAACAA
TGACGTTTTAGGAACACCGG

Downstream 100 bases:

>100_bases
TGATCAAGCGCCCGCGCTGGCAGTACGTGTTGCTGATTGCGCTAGCTTTACTGGCGCTCGCCACGCTGTTGGTGCCCTGC
ATGGTGCGTACCGAAAGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MDIIKELLHALWQQDFETLANPSLVWTLYGLLFLILFLENGLLPAAFLPGDSLLILVGVLIAKGTMNFPLTIFILTVAAS
LGCWVSYIQGKWLGNTRTVQGWLSHLPAHYHQRAHQLFHRHGLSALLVGRFLAFVRTLLPTIAGLSGLSNARFQFFNWMS
GLLWVVILTSLGFALGKTPVFRKYEDQLMFCLMLLPLVLLVAGLVGSLIVLWRKKRADQGKGA

Sequences:

>Translated_223_residues
MDIIKELLHALWQQDFETLANPSLVWTLYGLLFLILFLENGLLPAAFLPGDSLLILVGVLIAKGTMNFPLTIFILTVAAS
LGCWVSYIQGKWLGNTRTVQGWLSHLPAHYHQRAHQLFHRHGLSALLVGRFLAFVRTLLPTIAGLSGLSNARFQFFNWMS
GLLWVVILTSLGFALGKTPVFRKYEDQLMFCLMLLPLVLLVAGLVGSLIVLWRKKRADQGKGA
>Mature_223_residues
MDIIKELLHALWQQDFETLANPSLVWTLYGLLFLILFLENGLLPAAFLPGDSLLILVGVLIAKGTMNFPLTIFILTVAAS
LGCWVSYIQGKWLGNTRTVQGWLSHLPAHYHQRAHQLFHRHGLSALLVGRFLAFVRTLLPTIAGLSGLSNARFQFFNWMS
GLLWVVILTSLGFALGKTPVFRKYEDQLMFCLMLLPLVLLVAGLVGSLIVLWRKKRADQGKGA

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1789481, Length=220, Percent_Identity=80.4545454545455, Blast_Score=342, Evalue=9e-96,
Organism=Escherichia coli, GI1789384, Length=218, Percent_Identity=64.2201834862385, Blast_Score=275, Evalue=3e-75,
Organism=Escherichia coli, GI1788656, Length=209, Percent_Identity=31.1004784688995, Blast_Score=98, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 24911; Mature: 24911

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIIKELLHALWQQDFETLANPSLVWTLYGLLFLILFLENGLLPAAFLPGDSLLILVGVL
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
IAKGTMNFPLTIFILTVAASLGCWVSYIQGKWLGNTRTVQGWLSHLPAHYHQRAHQLFHR
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
HGLSALLVGRFLAFVRTLLPTIAGLSGLSNARFQFFNWMSGLLWVVILTSLGFALGKTPV
HCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
FRKYEDQLMFCLMLLPLVLLVAGLVGSLIVLWRKKRADQGKGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDIIKELLHALWQQDFETLANPSLVWTLYGLLFLILFLENGLLPAAFLPGDSLLILVGVL
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
IAKGTMNFPLTIFILTVAASLGCWVSYIQGKWLGNTRTVQGWLSHLPAHYHQRAHQLFHR
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
HGLSALLVGRFLAFVRTLLPTIAGLSGLSNARFQFFNWMSGLLWVVILTSLGFALGKTPV
HCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
FRKYEDQLMFCLMLLPLVLLVAGLVGSLIVLWRKKRADQGKGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]