| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is tyrP [H]
Identifier: 157372537
GI number: 157372537
Start: 4771748
End: 4772992
Strand: Reverse
Name: tyrP [H]
Synonym: Spro_4304
Alternate gene names: 157372537
Gene position: 4772992-4771748 (Counterclockwise)
Preceding gene: 157372538
Following gene: 157372535
Centisome position: 87.6
GC content: 57.91
Gene sequence:
>1245_bases ATGTCTTCTGATAATACCTATATTCCTCCGGCGCTTAGCGCCGGGGTGCGAAAGCCTGCACCCACCAAATCACTGAGTTT TCTCGAAGGGGTGGCGATGATTGTCGGCACCAACATTGGCGCCGGCGTGCTGTCTATCGCTTACGCTTCCAGCAAGGCCG GTTTTTTACCGCTGTTGTTCTGGCTGGTGCTGGTGGGCAGCCTGATCACTATCACCATGCTTTACGTCGCCGAATCCACT CTGCGCACCCGTTCTCACCTGCAATTAAGCGGGCTGGCGAAACGTTATGTCGGCGGTATCGGTGCCTGGCTGATGTTTGC TTCGGTCTGCGTCAACAGTGTCGGGGCGCTGACCGCCTATATGACCGGCAGCGGTAAACTGCTGCAATCCCTGTTTGGTA TCTCACCGGCGATCGGCAGCCTGCTGTTTTTCGTGCCGGCGGCGGGGGTGTTGTACCTGGGGCTGAAGGCGATTGGCCGT GGCGAAAAGTTTATCAGCATTGGCATGGTGGTGATGCTGACCGCGCTGGTGGCCGCCACGCTGCTCAAAGACACCACTCA GATGCGCAACCTGCTGGACGGCGACTGGCGCTTTATGGTGCCGGTCTTCAACGTGGTGGTGTTCTGCTTCTCGGCGCAGT ATATCGTGCCGGAAATGGCGCGCGGTTTCTCGGACAAACCAGAGCAACTGCCCAAGGCGATTATGGTCGGTATGGCGGTG ACCTTTGTGTTGCTGGCGGCGGTGCCGATGTCGGTCATTGCTCTCAGTGGATTGGATGGCATCACTGATGTGGCGACCAT TTCATGGGGCCAGGCGTTGGGGCAATGGGCGTTCTTCTCCGCCAACATCTTTGCTCTGTGCGCGATGTTGACTTCTTACT GGGGGCTGGGCGGCAGCTTCCTGACCAATATTTTCGACCAGTTCAGACTGGGTAATGACGAACAGCCGCTGCGTCGTTTC GGCGTGCTGATGCTGGTGGTATTGCCGCCGTTCGCGCTGGCTTACAGCGGGCTGGTGTCATTCGTTAACGCACTGTATTT CGCCGGGGTATTCAGCGGGGTGATCCTATCGATTATGCCGATGCTAATCCTGCGCGGGGCGCGCAAGCACGGTGACCAGA CGCCACGTTGGCAGTGCAGCTGGATCACCCATCCGTTGTTGCAGGTAAGCATCGTATTGCTGTACTTGGGCAGTGCGGTG TATGCCATTGCGTCGCTGTTCGGCTATCTGCCCTCTGGATGGTGA
Upstream 100 bases:
>100_bases TATCTGGAGTTGAAATACCTGTGTATCGATGTGAGCTGTTAACCACTGGGAAATTAACCTCTCCCGGTGGCTCGCACCGC CGGGAGACAAAGGATGCTGC
Downstream 100 bases:
>100_bases ATTGCCTTCCCTCAAGAAGTGATGTTGTTTCTCGATAATTGAGAACGGCGGCGTCGTGGCCGCCGGTTTTTTTAGCCGCG CATTTTCTCCGGCAGTGCCA
Product: aromatic amino acid permease
Products: Proton [Cytoplasm]; L-tyrosine [Cytoplasm] [C]
Alternate protein names: Tyrosine permease [H]
Number of amino acids: Translated: 414; Mature: 413
Protein sequence:
>414_residues MSSDNTYIPPALSAGVRKPAPTKSLSFLEGVAMIVGTNIGAGVLSIAYASSKAGFLPLLFWLVLVGSLITITMLYVAEST LRTRSHLQLSGLAKRYVGGIGAWLMFASVCVNSVGALTAYMTGSGKLLQSLFGISPAIGSLLFFVPAAGVLYLGLKAIGR GEKFISIGMVVMLTALVAATLLKDTTQMRNLLDGDWRFMVPVFNVVVFCFSAQYIVPEMARGFSDKPEQLPKAIMVGMAV TFVLLAAVPMSVIALSGLDGITDVATISWGQALGQWAFFSANIFALCAMLTSYWGLGGSFLTNIFDQFRLGNDEQPLRRF GVLMLVVLPPFALAYSGLVSFVNALYFAGVFSGVILSIMPMLILRGARKHGDQTPRWQCSWITHPLLQVSIVLLYLGSAV YAIASLFGYLPSGW
Sequences:
>Translated_414_residues MSSDNTYIPPALSAGVRKPAPTKSLSFLEGVAMIVGTNIGAGVLSIAYASSKAGFLPLLFWLVLVGSLITITMLYVAEST LRTRSHLQLSGLAKRYVGGIGAWLMFASVCVNSVGALTAYMTGSGKLLQSLFGISPAIGSLLFFVPAAGVLYLGLKAIGR GEKFISIGMVVMLTALVAATLLKDTTQMRNLLDGDWRFMVPVFNVVVFCFSAQYIVPEMARGFSDKPEQLPKAIMVGMAV TFVLLAAVPMSVIALSGLDGITDVATISWGQALGQWAFFSANIFALCAMLTSYWGLGGSFLTNIFDQFRLGNDEQPLRRF GVLMLVVLPPFALAYSGLVSFVNALYFAGVFSGVILSIMPMLILRGARKHGDQTPRWQCSWITHPLLQVSIVLLYLGSAV YAIASLFGYLPSGW >Mature_413_residues SSDNTYIPPALSAGVRKPAPTKSLSFLEGVAMIVGTNIGAGVLSIAYASSKAGFLPLLFWLVLVGSLITITMLYVAESTL RTRSHLQLSGLAKRYVGGIGAWLMFASVCVNSVGALTAYMTGSGKLLQSLFGISPAIGSLLFFVPAAGVLYLGLKAIGRG EKFISIGMVVMLTALVAATLLKDTTQMRNLLDGDWRFMVPVFNVVVFCFSAQYIVPEMARGFSDKPEQLPKAIMVGMAVT FVLLAAVPMSVIALSGLDGITDVATISWGQALGQWAFFSANIFALCAMLTSYWGLGGSFLTNIFDQFRLGNDEQPLRRFG VLMLVVLPPFALAYSGLVSFVNALYFAGVFSGVILSIMPMLILRGARKHGDQTPRWQCSWITHPLLQVSIVLLYLGSAVY AIASLFGYLPSGW
Specific function: Involved in transporting tyrosine across the cytoplasmic membrane [H]
COG id: COG0814
COG function: function code E; Amino acid permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid/polyamine transporter 2 family. Mtr/TnaB/TyrP permease subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788218, Length=366, Percent_Identity=26.2295081967213, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002091 - InterPro: IPR013061 - InterPro: IPR013059 - InterPro: IPR018227 [H]
Pfam domain/function: PF03222 Trp_Tyr_perm [H]
EC number: NA
Molecular weight: Translated: 44382; Mature: 44251
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSDNTYIPPALSAGVRKPAPTKSLSFLEGVAMIVGTNIGAGVLSIAYASSKAGFLPLLF CCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHH WLVLVGSLITITMLYVAESTLRTRSHLQLSGLAKRYVGGIGAWLMFASVCVNSVGALTAY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MTGSGKLLQSLFGISPAIGSLLFFVPAAGVLYLGLKAIGRGEKFISIGMVVMLTALVAAT CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LLKDTTQMRNLLDGDWRFMVPVFNVVVFCFSAQYIVPEMARGFSDKPEQLPKAIMVGMAV HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH TFVLLAAVPMSVIALSGLDGITDVATISWGQALGQWAFFSANIFALCAMLTSYWGLGGSF HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LTNIFDQFRLGNDEQPLRRFGVLMLVVLPPFALAYSGLVSFVNALYFAGVFSGVILSIMP HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLILRGARKHGDQTPRWQCSWITHPLLQVSIVLLYLGSAVYAIASLFGYLPSGW HHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SSDNTYIPPALSAGVRKPAPTKSLSFLEGVAMIVGTNIGAGVLSIAYASSKAGFLPLLF CCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHH WLVLVGSLITITMLYVAESTLRTRSHLQLSGLAKRYVGGIGAWLMFASVCVNSVGALTAY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MTGSGKLLQSLFGISPAIGSLLFFVPAAGVLYLGLKAIGRGEKFISIGMVVMLTALVAAT CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LLKDTTQMRNLLDGDWRFMVPVFNVVVFCFSAQYIVPEMARGFSDKPEQLPKAIMVGMAV HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH TFVLLAAVPMSVIALSGLDGITDVATISWGQALGQWAFFSANIFALCAMLTSYWGLGGSF HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LTNIFDQFRLGNDEQPLRRFGVLMLVVLPPFALAYSGLVSFVNALYFAGVFSGVILSIMP HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MLILRGARKHGDQTPRWQCSWITHPLLQVSIVLLYLGSAVYAIASLFGYLPSGW HHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; L-tyrosine [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-tyrosine [Periplasm] = Proton [Cytoplasm] + L-tyrosine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3049553; 9097040; 9278503 [H]