| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yjeH [H]
Identifier: 157372521
GI number: 157372521
Start: 4752016
End: 4753269
Strand: Reverse
Name: yjeH [H]
Synonym: Spro_4288
Alternate gene names: 157372521
Gene position: 4753269-4752016 (Counterclockwise)
Preceding gene: 157372522
Following gene: 157372519
Centisome position: 87.23
GC content: 58.61
Gene sequence:
>1254_bases GTGAGTGGACTGAAGCAAGAGCTGAGTTTGGCGCAGGGCGTTGGGCTATTGTCCACTTCACTGCTGGGTACCGGCGTATT TGCCGTTCCGGCTTTGGCAGCACAGGTGGCACAGGGCGATAGTCTGTGGGCCTGGCCGCTGCTGATTATCCTGGTTTTCC CGATCGCCATTGCCTTTGCGGCTTTGGGCCGCCATTTCCCTAGTGCGGCTGGTGCCGCGCACTTTGTCGGGCTGGCCTTT GGTCCGCGCATGGCGAAAGTCACTGGCTGGCTGTTTTTGTCGGTTATTCCGGTTGGCCTGCCGGCGGCGCTGCAGATTGC CGCCGGTTTTTGGCAGGCCACTTTCGGCTGGAGCGCCAATGGCCTGCTGCTGGTGCAAATTGCCACGCTGGTGATGATTT GGTTTTTAGGCACGCGCAGCGCGGGTTCCAGTGCCAATATTCAAACGCTAATCGCCGTTCTGGTGGTAGCGCTGGTGGCC GCTATCTGGTGGCGTGGCGACATCTCACTGTCCCAAATTCCCTGGCCGGCAATCAACGAAATCTCCTCGCCCAATCTGTT CCATGCGCTGGCAGTGATGTTCTGGTGCTTTGTGGGCCTGGAGGCATTTGCCCATCTGGCGACCGAGTTCCGTAACCCTG AACGCGATTTTCCGCGTGCACTTCTGTTTGGCATGTTGGTCGCCGGGGCGGTGTACTGGGGCTGTACCGTGGCGGTGCTG CATTTCCACGCCTACGGTGAGCATCAGGCGGCGGCTGCGTCATTGCCGGGTATCGTGGTGCAACTGTTTGGTCAGCATGC GCTGTGGGTGGCCTGTATCATTGGCTATCTGGCCTGCTTTGCCAGCGTCAATATCTATACCCAAAGCTTCGCCCGGCTGG TGTGGTCACAGGCGCAGGATCGTCCGGCCAGCGCGCTGGCCAGGCTGTCTGCCGGACAGGCACCGGTCAATGCATTAAGC GCGGTGGTGGGCAGCTGTTTGCTGTTCACTTTGCTGATTTATACGCTGAAGCTGCCGCTGGATACGCTGCTGGTGTATGC CAATGGCATCTTTGTGCTGATCTATTTGCTGTGTATGCTGGCGGGCTGCCGAATTTTACACGGGCGTTCGCGGCTAATGG CGGCGACAGGATTAGGGCTGTGTGTGCTGTTGATGGTGATTATCGGCTGGAAAAGCCTGTATGCACTGGGAATGTTCGCG ATGATTTGGCTGGTGTTGCGGCTTAAGGCTCAGGCGGCGCTCAAACCGCAATAA
Upstream 100 bases:
>100_bases GTAAAAGTGCTGAACTTTGAAGACGGCCTGTCGACCACCAACATCATCAAGGCAATCAAAGACGGGCGTGGCTAACGTTC GCTGAAAACGGCGGTGGGCA
Downstream 100 bases:
>100_bases GGGCGCAGTATCGCGCCCTTAACGGTAACTTATTCGGCGTCTGGCTGTTGCGCAGCAGGCGTGGCGTTCAGCTTGCTTTC CAGCTCGCTCATACGCTGTT
Product: inner membrane protein YjeH
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 417; Mature: 416
Protein sequence:
>417_residues MSGLKQELSLAQGVGLLSTSLLGTGVFAVPALAAQVAQGDSLWAWPLLIILVFPIAIAFAALGRHFPSAAGAAHFVGLAF GPRMAKVTGWLFLSVIPVGLPAALQIAAGFWQATFGWSANGLLLVQIATLVMIWFLGTRSAGSSANIQTLIAVLVVALVA AIWWRGDISLSQIPWPAINEISSPNLFHALAVMFWCFVGLEAFAHLATEFRNPERDFPRALLFGMLVAGAVYWGCTVAVL HFHAYGEHQAAAASLPGIVVQLFGQHALWVACIIGYLACFASVNIYTQSFARLVWSQAQDRPASALARLSAGQAPVNALS AVVGSCLLFTLLIYTLKLPLDTLLVYANGIFVLIYLLCMLAGCRILHGRSRLMAATGLGLCVLLMVIIGWKSLYALGMFA MIWLVLRLKAQAALKPQ
Sequences:
>Translated_417_residues MSGLKQELSLAQGVGLLSTSLLGTGVFAVPALAAQVAQGDSLWAWPLLIILVFPIAIAFAALGRHFPSAAGAAHFVGLAF GPRMAKVTGWLFLSVIPVGLPAALQIAAGFWQATFGWSANGLLLVQIATLVMIWFLGTRSAGSSANIQTLIAVLVVALVA AIWWRGDISLSQIPWPAINEISSPNLFHALAVMFWCFVGLEAFAHLATEFRNPERDFPRALLFGMLVAGAVYWGCTVAVL HFHAYGEHQAAAASLPGIVVQLFGQHALWVACIIGYLACFASVNIYTQSFARLVWSQAQDRPASALARLSAGQAPVNALS AVVGSCLLFTLLIYTLKLPLDTLLVYANGIFVLIYLLCMLAGCRILHGRSRLMAATGLGLCVLLMVIIGWKSLYALGMFA MIWLVLRLKAQAALKPQ >Mature_416_residues SGLKQELSLAQGVGLLSTSLLGTGVFAVPALAAQVAQGDSLWAWPLLIILVFPIAIAFAALGRHFPSAAGAAHFVGLAFG PRMAKVTGWLFLSVIPVGLPAALQIAAGFWQATFGWSANGLLLVQIATLVMIWFLGTRSAGSSANIQTLIAVLVVALVAA IWWRGDISLSQIPWPAINEISSPNLFHALAVMFWCFVGLEAFAHLATEFRNPERDFPRALLFGMLVAGAVYWGCTVAVLH FHAYGEHQAAAASLPGIVVQLFGQHALWVACIIGYLACFASVNIYTQSFARLVWSQAQDRPASALARLSAGQAPVNALSA VVGSCLLFTLLIYTLKLPLDTLLVYANGIFVLIYLLCMLAGCRILHGRSRLMAATGLGLCVLLMVIIGWKSLYALGMFAM IWLVLRLKAQAALKPQ
Specific function: Unknown
COG id: COG0531
COG function: function code E; Amino acid transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790584, Length=406, Percent_Identity=70.935960591133, Blast_Score=543, Evalue=1e-155, Organism=Escherichia coli, GI2367353, Length=238, Percent_Identity=25.6302521008403, Blast_Score=62, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 44556; Mature: 44424
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGLKQELSLAQGVGLLSTSLLGTGVFAVPALAAQVAQGDSLWAWPLLIILVFPIAIAFA CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH ALGRHFPSAAGAAHFVGLAFGPRMAKVTGWLFLSVIPVGLPAALQIAAGFWQATFGWSAN HHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC GLLLVQIATLVMIWFLGTRSAGSSANIQTLIAVLVVALVAAIWWRGDISLSQIPWPAINE CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHC ISSPNLFHALAVMFWCFVGLEAFAHLATEFRNPERDFPRALLFGMLVAGAVYWGCTVAVL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH HFHAYGEHQAAAASLPGIVVQLFGQHALWVACIIGYLACFASVNIYTQSFARLVWSQAQD HHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RPASALARLSAGQAPVNALSAVVGSCLLFTLLIYTLKLPLDTLLVYANGIFVLIYLLCML CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH AGCRILHGRSRLMAATGLGLCVLLMVIIGWKSLYALGMFAMIWLVLRLKAQAALKPQ HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SGLKQELSLAQGVGLLSTSLLGTGVFAVPALAAQVAQGDSLWAWPLLIILVFPIAIAFA CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH ALGRHFPSAAGAAHFVGLAFGPRMAKVTGWLFLSVIPVGLPAALQIAAGFWQATFGWSAN HHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC GLLLVQIATLVMIWFLGTRSAGSSANIQTLIAVLVVALVAAIWWRGDISLSQIPWPAINE CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHC ISSPNLFHALAVMFWCFVGLEAFAHLATEFRNPERDFPRALLFGMLVAGAVYWGCTVAVL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH HFHAYGEHQAAAASLPGIVVQLFGQHALWVACIIGYLACFASVNIYTQSFARLVWSQAQD HHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RPASALARLSAGQAPVNALSAVVGSCLLFTLLIYTLKLPLDTLLVYANGIFVLIYLLCML CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH AGCRILHGRSRLMAATGLGLCVLLMVIIGWKSLYALGMFAMIWLVLRLKAQAALKPQ HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]