| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157372405
Identifier: 157372405
GI number: 157372405
Start: 4627996
End: 4628907
Strand: Reverse
Name: 157372405
Synonym: Spro_4172
Alternate gene names: NA
Gene position: 4628907-4627996 (Counterclockwise)
Preceding gene: 157372406
Following gene: 157372404
Centisome position: 84.95
GC content: 61.84
Gene sequence:
>912_bases ATGATGAAAGCACGTGTTCTGGCGCTTTCCCTGAGTGTGCTTCCCCTGGCGGCAACGTTCACGGTGCCGGTTACGCAGGC GGAGGAGCTGATGAAATGGGAGCGCATCCCGTTACAAATCCCGCTGACCGTCGGCAAGGAGCGGGTGCTGTTTGCCGATA AAAATGTTCGCGTCGGTTTCCCGCCGGCGCTGAACGGCAAGCTGCGGGTGCAAAGCAGTGGTGGTGCGGTTTACCTGAAA GCCGATGCCGCATTCCCGTCAACGCGTCTGCAACTGCAGGACGTCGAAAACGGGGAGGTCATCCTCCTCGACGTGACGGC ATCCGATAAAGGTTCCGCCGAACCGGTGCGCATTGTCTACAGCGGTGATGTGTCGTCGGTCAGCAGCAGTAATGATACCC CGTCCCCATCAAGCGCGAGTAGTTCGGCTGCGCCTGGAACGGAGGATGGCACCCAGGCGAAGCGCAAAAAAGTCAGATAC AACGCGCCGTTGCCGGTGGTGTTGACACGCTACGCGGCACAAAGCCTGTACGGCCCGGTGCGCACGGTTGAAGCGGTGCC GGGCATTCACCCGGTCAACCCGCACCTGCCAAAACGCATCACCACCTTGTACCCGTCAGAGTCGGTGGCCATCACGCCGC TGGGCGGCTGGGGTATTGGCAGTCGCAATGTGGTGGCGCTAAAAGTGCAGAACACCGCCAGCCGTAAAATCACGCTGGAT CCTCGGGTGCTGCAGGGGCAGTTCGTGACGGCCACCTTCCAGCACCGTTATCTGGGGCCGGTGGGGACCCCGGAAGACAC TACCACGCTGTACCTGGTCACGGCCGGTCGCCCGGACGGGGCGTTTGTCGCGGAGCCGTCGGTGGTTCGCAAAGCGGTGA AGGCAGCGAAGAAGGGAGCAAACCATGGCTGA
Upstream 100 bases:
>100_bases GTAATGAGTTCGGTCTGGCCCTGGATTGTTACGACAGCATGCCACAGCGTCTGGCTGCGGCGCCGGCGGAACCCGCACCT GAGAAGAAAGGAGTATTCCA
Downstream 100 bases:
>100_bases TGTGAAATCTAACATGCTGCCGAAAGTGATTGTGGTCGGCGTGCTGGCTGCGGCCGTGGTTGTTGGGCTGAAAGCCTGCA GCAGCAATAAAACGACGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MMKARVLALSLSVLPLAATFTVPVTQAEELMKWERIPLQIPLTVGKERVLFADKNVRVGFPPALNGKLRVQSSGGAVYLK ADAAFPSTRLQLQDVENGEVILLDVTASDKGSAEPVRIVYSGDVSSVSSSNDTPSPSSASSSAAPGTEDGTQAKRKKVRY NAPLPVVLTRYAAQSLYGPVRTVEAVPGIHPVNPHLPKRITTLYPSESVAITPLGGWGIGSRNVVALKVQNTASRKITLD PRVLQGQFVTATFQHRYLGPVGTPEDTTTLYLVTAGRPDGAFVAEPSVVRKAVKAAKKGANHG
Sequences:
>Translated_303_residues MMKARVLALSLSVLPLAATFTVPVTQAEELMKWERIPLQIPLTVGKERVLFADKNVRVGFPPALNGKLRVQSSGGAVYLK ADAAFPSTRLQLQDVENGEVILLDVTASDKGSAEPVRIVYSGDVSSVSSSNDTPSPSSASSSAAPGTEDGTQAKRKKVRY NAPLPVVLTRYAAQSLYGPVRTVEAVPGIHPVNPHLPKRITTLYPSESVAITPLGGWGIGSRNVVALKVQNTASRKITLD PRVLQGQFVTATFQHRYLGPVGTPEDTTTLYLVTAGRPDGAFVAEPSVVRKAVKAAKKGANHG >Mature_303_residues MMKARVLALSLSVLPLAATFTVPVTQAEELMKWERIPLQIPLTVGKERVLFADKNVRVGFPPALNGKLRVQSSGGAVYLK ADAAFPSTRLQLQDVENGEVILLDVTASDKGSAEPVRIVYSGDVSSVSSSNDTPSPSSASSSAAPGTEDGTQAKRKKVRY NAPLPVVLTRYAAQSLYGPVRTVEAVPGIHPVNPHLPKRITTLYPSESVAITPLGGWGIGSRNVVALKVQNTASRKITLD PRVLQGQFVTATFQHRYLGPVGTPEDTTTLYLVTAGRPDGAFVAEPSVVRKAVKAAKKGANHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32183; Mature: 32183
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKARVLALSLSVLPLAATFTVPVTQAEELMKWERIPLQIPLTVGKERVLFADKNVRVGF CCCEEEEEEEEEEEEEEEEEEEECCCHHHHHHHHCCCEEEEEECCCEEEEEECCCEEECC PPALNGKLRVQSSGGAVYLKADAAFPSTRLQLQDVENGEVILLDVTASDKGSAEPVRIVY CCCCCCEEEEECCCCEEEEEECCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEEE SGDVSSVSSSNDTPSPSSASSSAAPGTEDGTQAKRKKVRYNAPLPVVLTRYAAQSLYGPV ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHEEECCCCCHHHHHHHHHHHCCCH RTVEAVPGIHPVNPHLPKRITTLYPSESVAITPLGGWGIGSRNVVALKVQNTASRKITLD HHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCEEEEEEECCCCCEEEEC PRVLQGQFVTATFQHRYLGPVGTPEDTTTLYLVTAGRPDGAFVAEPSVVRKAVKAAKKGA CEEECCEEEEEEECCEECCCCCCCCCCEEEEEEECCCCCCCEEECHHHHHHHHHHHHCCC NHG CCC >Mature Secondary Structure MMKARVLALSLSVLPLAATFTVPVTQAEELMKWERIPLQIPLTVGKERVLFADKNVRVGF CCCEEEEEEEEEEEEEEEEEEEECCCHHHHHHHHCCCEEEEEECCCEEEEEECCCEEECC PPALNGKLRVQSSGGAVYLKADAAFPSTRLQLQDVENGEVILLDVTASDKGSAEPVRIVY CCCCCCEEEEECCCCEEEEEECCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEEE SGDVSSVSSSNDTPSPSSASSSAAPGTEDGTQAKRKKVRYNAPLPVVLTRYAAQSLYGPV ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHEEECCCCCHHHHHHHHHHHCCCH RTVEAVPGIHPVNPHLPKRITTLYPSESVAITPLGGWGIGSRNVVALKVQNTASRKITLD HHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCEEEEEEECCCCCEEEEC PRVLQGQFVTATFQHRYLGPVGTPEDTTTLYLVTAGRPDGAFVAEPSVVRKAVKAAKKGA CEEECCEEEEEEECCEECCCCCCCCCCEEEEEEECCCCCCCEEECHHHHHHHHHHHHCCC NHG CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA