| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is 157372402
Identifier: 157372402
GI number: 157372402
Start: 4623062
End: 4625926
Strand: Reverse
Name: 157372402
Synonym: Spro_4169
Alternate gene names: NA
Gene position: 4625926-4623062 (Counterclockwise)
Preceding gene: 157372403
Following gene: 157372401
Centisome position: 84.9
GC content: 58.95
Gene sequence:
>2865_bases ATGCGATTTTCCCTGTTTGATAAAAAGCGCCAGACGCGCAAGACGCCGGTGGTGCCGGCTACGGGTGACCAGGACTCCGT GATCGCCACTGAGGACGGCGTGTCGCTGTCCGTCGACGGGCGTGAGCCATTACGGCGCCCGGGTAAGATGACGGTAAAGG ATGAGAAACAGGTGTATCACGCCAACCCGTCCATCGTTGATTACCTGCCCTGGGCGGAGTTTCTCGACCGCGAACAGTGT ATTTTGCTCGATGACGGGGTGTCCGTCGGGGCTGTTTTTGACATCACGCCGGTAGCCACCGAAGGACGCACGGACGATCG CCTGGAGCAAATGCGCGACACGGTGGAAGACGCCCTGCAGGACTCATTTGACGAGCATGACGAAAACCCCTGGGTGGTGC AGTTCTTTTGCCAGGACGAGAACAACGTCGAGGCGTATATCGACCGCCTGAGAAATTACGTCAAACCCCATGCCCAGGGC AGCGCGTTCACAGAAGACTGGCTGAAAGAAACCGAACGTCATATGCGCGGTATCGCTCGTCCGGAAGGCCTGTTTAAGGA CACGCTGATCACCGATCAGCCATGGCGTGGGCAGCAACGTCGTACCCGTATGGTGGTGTATCGCTGGATTGGCAAGGGCA ATCATGATCCGATGCCACCAGTTGCCATGCTGAATCAGACCTGTGAGCGGGTGACCGGGGCGCTCGCCGGCGCCGGCGTG ATCTGCGTGCGCCAGAACGGGGCACAGGTCCATGACTGGCTGCTGCGTCATTTTAATCCGAACCCGGAATGGGTGGAAAA AGAGACCCTGTACCGTGACGCCGCTTATTTTGACAGTCGTGACACGCCGGAAGGCGCCATGCCGGTGCAGAACGATTTTG CCGAGACCCTGTTGTTCACCCCGCCCTTGTCCGATCCGGACCAGGGGGTATGGTGGTTCGATAACCAGGCGCATTGCGCC ATTCCCGTCGAGAAGCTGCGCCGCCCGCCGGAGCCGGGCACCATCACCGGTGAAATGAAACGCGGGGAGAAGAAAATCAA TGCGCTGATGGACTTGTTCCCGGAGGGAACGATGCTGTGCATGACCATCGTGGTACAGCCTCAGGACACGCTGGAGAATG ATTTCAACAAGCTGTCGAAAAACGCCGTCGGCGAGAATACCGAGTCCGGCCGCGTGCGTCAGGATGTGGCGCAGGTGAAA GAGTACCTGGGCAATCGCCACAAGCTGTACCGTGCCGGCATTACGTTTCTGCTGCGTGCCGGCGACCTGACCACACTCAA CCATAAACGTGTCGATCTGACCAACGTGCTGCTGGGGGCCGGCCTGCAGCCGGTACGGCCGGAGTTTGATGTGGCGCCGC TCAATACCTACCTGCGGGCGTTACCGATGTGTTTTAACCCGGAGACCGACAAGAAACACTGGTATACCCGCCTGACCTGG GTGCAGCATCTGGCAGGGTTGTTGCCGGTGACCGGTCGTGAGACCGGAACCGGTAATCCCGGTATGAGCTTCTTCAATCG TGGCGGGGATACGCTGACGGTTGACCCGCTTAACAAGCATGACCGCAGCCAAAATGCGCACATGCTGTATTTTGGCCCGA CCGGCGCGGGGAAATCGGCGACGTTGTGTGCGACCTTATCGCAACTGATGGCGATACACCGGCCGCGGTTGTTTATCGCG GAAGCGGGCAACTCGTTTGGGTTGCTGGCCGATTACTTCGAGAGTCAGGGGTTCAGCGTCAATAAGGTGAGCATCAAGCC GGGCAGTGGTGTCTCGCTGCCGCCGTTCTCCTATGCGCACAAGCTGGTCGAAGATGCATTAACGACGTTGGCCCTGGATG AAAATGACCTGCCGGATATCGATGCCGATGACGACGACGATGACGACAAGCGCGATTACCTGGGGGAAATGGAGATCTCG GCGCGCATGATGATCACTGGCGGTGATGAGAAGGAAGAGCATGAGTTGAAGCGTGCCGACCGCGCGATGATCCGTGAAGC CCTGTTGATGGCGGCGCGTCAGACCTATGACGAGGGGCGACAGATGTTGCCGGCAGACCTGCAGAAGGCGCTGTACACCC TCTCGAAAGATGAAGGGAGTGATATCCGTAATGAGCAGCGTCGGGCCAAGGCGGCTGAAATGGCCGAGTCGCTCGGGATG TTTACCCAGGCCGGCAGCTTCGAGGCGGAGTTGTTTAACCGCGAAGGTAGCCTGTGGCCAGAGGTGGATGTCACCCTGAT TGACCTGGGACATCTGGCGCGTGAGGGGTATGAGGCGCAGATGGCGTTGACGATGGTGAGCCTGACCAACACCATCAACA ACATTGCCGAACGAGACCAGTACTCGGAGCGGGACATCGTGTTCGCGGTGGATGAAGCGCACATTGTGACGGTGAATCCG CTGCTGGCACCGTACATGACCAAAATCGTCAAGATGTGGCGTAAGCTCGGTGCCTGGCTGTGGCTGGCGACGCAGAACTT AAAAGACTTCCCGGACATTGCCGAGAAGATGCTGAACATGGCGGAGTGGTGGGTCTGTCTGACGATGCCGCCGGAGGAGG TCAATGACATTGCCCGCTTCAAAGCCCTGACCGAGGAGCAAAAAGCGGTGCTGCTGTCAGCCAGTAAGCTGTCCGGTTGC TATACCGAAGGTGTGGTATTGTCGAAAAAACTCGAGGCGTTGTTTCGTGCGGTACCGCCGAGCCTGTACCTGGCGCTGGG GATGACCGAGAAAGAAGAGAAGGCCGAGCGCCGCGCGCTGATGCAGGAGTTTGGTTGCAGCGAGCTTGAGGCTGCCCGTA AGGTGGCGCAAAAGCTTGACCGCCTGCGCGGCCTGGTGGTGAACGGGGAGGATCGGGCTGCATGA
Upstream 100 bases:
>100_bases TGGCGGACGGCAACGCACCGGTGCCGGGGTACAGCACCGTGTTCCCGTTCTACAGCCAGGTGCAGTATGCGATGCCGGGT GAACGGACGGAGGCCTACTG
Downstream 100 bases:
>100_bases TGACCCTGAAATACCCCGAACCTGTTGTTAGACAACCGGGCCTGGTCTGTCGTGAACCGTCGTTGTTTACACTCCCACCG CAGGGTGCGGCCACCCTGAG
Product: putative plasmid-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 954; Mature: 954
Protein sequence:
>954_residues MRFSLFDKKRQTRKTPVVPATGDQDSVIATEDGVSLSVDGREPLRRPGKMTVKDEKQVYHANPSIVDYLPWAEFLDREQC ILLDDGVSVGAVFDITPVATEGRTDDRLEQMRDTVEDALQDSFDEHDENPWVVQFFCQDENNVEAYIDRLRNYVKPHAQG SAFTEDWLKETERHMRGIARPEGLFKDTLITDQPWRGQQRRTRMVVYRWIGKGNHDPMPPVAMLNQTCERVTGALAGAGV ICVRQNGAQVHDWLLRHFNPNPEWVEKETLYRDAAYFDSRDTPEGAMPVQNDFAETLLFTPPLSDPDQGVWWFDNQAHCA IPVEKLRRPPEPGTITGEMKRGEKKINALMDLFPEGTMLCMTIVVQPQDTLENDFNKLSKNAVGENTESGRVRQDVAQVK EYLGNRHKLYRAGITFLLRAGDLTTLNHKRVDLTNVLLGAGLQPVRPEFDVAPLNTYLRALPMCFNPETDKKHWYTRLTW VQHLAGLLPVTGRETGTGNPGMSFFNRGGDTLTVDPLNKHDRSQNAHMLYFGPTGAGKSATLCATLSQLMAIHRPRLFIA EAGNSFGLLADYFESQGFSVNKVSIKPGSGVSLPPFSYAHKLVEDALTTLALDENDLPDIDADDDDDDDKRDYLGEMEIS ARMMITGGDEKEEHELKRADRAMIREALLMAARQTYDEGRQMLPADLQKALYTLSKDEGSDIRNEQRRAKAAEMAESLGM FTQAGSFEAELFNREGSLWPEVDVTLIDLGHLAREGYEAQMALTMVSLTNTINNIAERDQYSERDIVFAVDEAHIVTVNP LLAPYMTKIVKMWRKLGAWLWLATQNLKDFPDIAEKMLNMAEWWVCLTMPPEEVNDIARFKALTEEQKAVLLSASKLSGC YTEGVVLSKKLEALFRAVPPSLYLALGMTEKEEKAERRALMQEFGCSELEAARKVAQKLDRLRGLVVNGEDRAA
Sequences:
>Translated_954_residues MRFSLFDKKRQTRKTPVVPATGDQDSVIATEDGVSLSVDGREPLRRPGKMTVKDEKQVYHANPSIVDYLPWAEFLDREQC ILLDDGVSVGAVFDITPVATEGRTDDRLEQMRDTVEDALQDSFDEHDENPWVVQFFCQDENNVEAYIDRLRNYVKPHAQG SAFTEDWLKETERHMRGIARPEGLFKDTLITDQPWRGQQRRTRMVVYRWIGKGNHDPMPPVAMLNQTCERVTGALAGAGV ICVRQNGAQVHDWLLRHFNPNPEWVEKETLYRDAAYFDSRDTPEGAMPVQNDFAETLLFTPPLSDPDQGVWWFDNQAHCA IPVEKLRRPPEPGTITGEMKRGEKKINALMDLFPEGTMLCMTIVVQPQDTLENDFNKLSKNAVGENTESGRVRQDVAQVK EYLGNRHKLYRAGITFLLRAGDLTTLNHKRVDLTNVLLGAGLQPVRPEFDVAPLNTYLRALPMCFNPETDKKHWYTRLTW VQHLAGLLPVTGRETGTGNPGMSFFNRGGDTLTVDPLNKHDRSQNAHMLYFGPTGAGKSATLCATLSQLMAIHRPRLFIA EAGNSFGLLADYFESQGFSVNKVSIKPGSGVSLPPFSYAHKLVEDALTTLALDENDLPDIDADDDDDDDKRDYLGEMEIS ARMMITGGDEKEEHELKRADRAMIREALLMAARQTYDEGRQMLPADLQKALYTLSKDEGSDIRNEQRRAKAAEMAESLGM FTQAGSFEAELFNREGSLWPEVDVTLIDLGHLAREGYEAQMALTMVSLTNTINNIAERDQYSERDIVFAVDEAHIVTVNP LLAPYMTKIVKMWRKLGAWLWLATQNLKDFPDIAEKMLNMAEWWVCLTMPPEEVNDIARFKALTEEQKAVLLSASKLSGC YTEGVVLSKKLEALFRAVPPSLYLALGMTEKEEKAERRALMQEFGCSELEAARKVAQKLDRLRGLVVNGEDRAA >Mature_954_residues MRFSLFDKKRQTRKTPVVPATGDQDSVIATEDGVSLSVDGREPLRRPGKMTVKDEKQVYHANPSIVDYLPWAEFLDREQC ILLDDGVSVGAVFDITPVATEGRTDDRLEQMRDTVEDALQDSFDEHDENPWVVQFFCQDENNVEAYIDRLRNYVKPHAQG SAFTEDWLKETERHMRGIARPEGLFKDTLITDQPWRGQQRRTRMVVYRWIGKGNHDPMPPVAMLNQTCERVTGALAGAGV ICVRQNGAQVHDWLLRHFNPNPEWVEKETLYRDAAYFDSRDTPEGAMPVQNDFAETLLFTPPLSDPDQGVWWFDNQAHCA IPVEKLRRPPEPGTITGEMKRGEKKINALMDLFPEGTMLCMTIVVQPQDTLENDFNKLSKNAVGENTESGRVRQDVAQVK EYLGNRHKLYRAGITFLLRAGDLTTLNHKRVDLTNVLLGAGLQPVRPEFDVAPLNTYLRALPMCFNPETDKKHWYTRLTW VQHLAGLLPVTGRETGTGNPGMSFFNRGGDTLTVDPLNKHDRSQNAHMLYFGPTGAGKSATLCATLSQLMAIHRPRLFIA EAGNSFGLLADYFESQGFSVNKVSIKPGSGVSLPPFSYAHKLVEDALTTLALDENDLPDIDADDDDDDDKRDYLGEMEIS ARMMITGGDEKEEHELKRADRAMIREALLMAARQTYDEGRQMLPADLQKALYTLSKDEGSDIRNEQRRAKAAEMAESLGM FTQAGSFEAELFNREGSLWPEVDVTLIDLGHLAREGYEAQMALTMVSLTNTINNIAERDQYSERDIVFAVDEAHIVTVNP LLAPYMTKIVKMWRKLGAWLWLATQNLKDFPDIAEKMLNMAEWWVCLTMPPEEVNDIARFKALTEEQKAVLLSASKLSGC YTEGVVLSKKLEALFRAVPPSLYLALGMTEKEEKAERRALMQEFGCSELEAARKVAQKLDRLRGLVVNGEDRAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 107615; Mature: 107615
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFSLFDKKRQTRKTPVVPATGDQDSVIATEDGVSLSVDGREPLRRPGKMTVKDEKQVYH CCCCCHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEEECCCHHHCCCCCCCCCCCCCEEE ANPSIVDYLPWAEFLDREQCILLDDGVSVGAVFDITPVATEGRTDDRLEQMRDTVEDALQ CCCCCEECCCHHHHCCCCCEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHH DSFDEHDENPWVVQFFCQDENNVEAYIDRLRNYVKPHAQGSAFTEDWLKETERHMRGIAR HHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCC PEGLFKDTLITDQPWRGQQRRTRMVVYRWIGKGNHDPMPPVAMLNQTCERVTGALAGAGV CCCHHHHCCCCCCCCCCHHHHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCE ICVRQNGAQVHDWLLRHFNPNPEWVEKETLYRDAAYFDSRDTPEGAMPVQNDFAETLLFT EEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHEEEC PPLSDPDQGVWWFDNQAHCAIPVEKLRRPPEPGTITGEMKRGEKKINALMDLFPEGTMLC CCCCCCCCCEEEECCCCCEECCHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCEEE MTIVVQPQDTLENDFNKLSKNAVGENTESGRVRQDVAQVKEYLGNRHKLYRAGITFLLRA EEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHEEEC GDLTTLNHKRVDLTNVLLGAGLQPVRPEFDVAPLNTYLRALPMCFNPETDKKHWYTRLTW CCEEECCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHH VQHLAGLLPVTGRETGTGNPGMSFFNRGGDTLTVDPLNKHDRSQNAHMLYFGPTGAGKSA HHHHHHHCCCCCCCCCCCCCCHHHHHCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCH TLCATLSQLMAIHRPRLFIAEAGNSFGLLADYFESQGFSVNKVSIKPGSGVSLPPFSYAH HHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHH KLVEDALTTLALDENDLPDIDADDDDDDDKRDYLGEMEISARMMITGGDEKEEHELKRAD HHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHCCEEEEEEEEEECCCCHHHHHHHHHH RAMIREALLMAARQTYDEGRQMLPADLQKALYTLSKDEGSDIRNEQRRAKAAEMAESLGM HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH FTQAGSFEAELFNREGSLWPEVDVTLIDLGHLAREGYEAQMALTMVSLTNTINNIAERDQ HHCCCCCHHHHHCCCCCCCCCCCEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC YSERDIVFAVDEAHIVTVNPLLAPYMTKIVKMWRKLGAWLWLATQNLKDFPDIAEKMLNM CCCCCEEEEECCCEEEEECHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHH AEWWVCLTMPPEEVNDIARFKALTEEQKAVLLSASKLSGCYTEGVVLSKKLEALFRAVPP HHEEEEEECCHHHHHHHHHHHHHHHHHHHHEEEHHHHCCHHHCCHHHHHHHHHHHHHCCC SLYLALGMTEKEEKAERRALMQEFGCSELEAARKVAQKLDRLRGLVVNGEDRAA HHEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEECCCCCCC >Mature Secondary Structure MRFSLFDKKRQTRKTPVVPATGDQDSVIATEDGVSLSVDGREPLRRPGKMTVKDEKQVYH CCCCCHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEEECCCHHHCCCCCCCCCCCCCEEE ANPSIVDYLPWAEFLDREQCILLDDGVSVGAVFDITPVATEGRTDDRLEQMRDTVEDALQ CCCCCEECCCHHHHCCCCCEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHH DSFDEHDENPWVVQFFCQDENNVEAYIDRLRNYVKPHAQGSAFTEDWLKETERHMRGIAR HHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCC PEGLFKDTLITDQPWRGQQRRTRMVVYRWIGKGNHDPMPPVAMLNQTCERVTGALAGAGV CCCHHHHCCCCCCCCCCHHHHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCE ICVRQNGAQVHDWLLRHFNPNPEWVEKETLYRDAAYFDSRDTPEGAMPVQNDFAETLLFT EEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHEEEC PPLSDPDQGVWWFDNQAHCAIPVEKLRRPPEPGTITGEMKRGEKKINALMDLFPEGTMLC CCCCCCCCCEEEECCCCCEECCHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCEEE MTIVVQPQDTLENDFNKLSKNAVGENTESGRVRQDVAQVKEYLGNRHKLYRAGITFLLRA EEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHEEEC GDLTTLNHKRVDLTNVLLGAGLQPVRPEFDVAPLNTYLRALPMCFNPETDKKHWYTRLTW CCEEECCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHH VQHLAGLLPVTGRETGTGNPGMSFFNRGGDTLTVDPLNKHDRSQNAHMLYFGPTGAGKSA HHHHHHHCCCCCCCCCCCCCCHHHHHCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCH TLCATLSQLMAIHRPRLFIAEAGNSFGLLADYFESQGFSVNKVSIKPGSGVSLPPFSYAH HHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHH KLVEDALTTLALDENDLPDIDADDDDDDDKRDYLGEMEISARMMITGGDEKEEHELKRAD HHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHCCEEEEEEEEEECCCCHHHHHHHHHH RAMIREALLMAARQTYDEGRQMLPADLQKALYTLSKDEGSDIRNEQRRAKAAEMAESLGM HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH FTQAGSFEAELFNREGSLWPEVDVTLIDLGHLAREGYEAQMALTMVSLTNTINNIAERDQ HHCCCCCHHHHHCCCCCCCCCCCEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC YSERDIVFAVDEAHIVTVNPLLAPYMTKIVKMWRKLGAWLWLATQNLKDFPDIAEKMLNM CCCCCEEEEECCCEEEEECHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHH AEWWVCLTMPPEEVNDIARFKALTEEQKAVLLSASKLSGCYTEGVVLSKKLEALFRAVPP HHEEEEEECCHHHHHHHHHHHHHHHHHHHHEEEHHHHCCHHHCCHHHHHHHHHHHHHCCC SLYLALGMTEKEEKAERRALMQEFGCSELEAARKVAQKLDRLRGLVVNGEDRAA HHEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA