| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157372344
Identifier: 157372344
GI number: 157372344
Start: 4564752
End: 4565999
Strand: Reverse
Name: 157372344
Synonym: Spro_4110
Alternate gene names: NA
Gene position: 4565999-4564752 (Counterclockwise)
Preceding gene: 157372345
Following gene: 157372343
Centisome position: 83.8
GC content: 55.53
Gene sequence:
>1248_bases ATGAGCATAAATAAAACACCTGATGACAGCCTGATCACCTTTACGCTCGAACAAATGAATGCCCGCCTGGCAGAACGAAT AGGTGCCGAAAAGCATGCGGGGACTCCCGATGTTACGAATCTACGCAGTGGTCTGCTGTTTATGGGCAATGTGCATGATT CCATCCCCCGCCGGTTGCTCCTGGACACCCGTTTGTCCCCGCTGGATAAAACCGCGTGGATAATGATCCGCCTGTACGCG CAACAGAACCAGGGCGCCGTGTTCCCGACCTATGACGAGCTGCAACTGCAGCTTGCCTCGCCGTTTAACGGTAAGGCGTC CCGCGAGACGGTCAGCCGTGTGCTGCTGATGTTACGCCTGACAGGCTGGCTCAGTTTGTGCCGGCGTGTGCGTGACGACA AGGGTCGGGTGAAGGGTAATATCTATGCCCAACATGATGAGCCACTCTCGGCCCGAGATGCGGAGACGTTGGATCCGACC TGGCTGGATACGGTCGCCATGGGTTGCGCGCATAAGAACCGCACTGTCAGTCAGACTGCCTGGTCAGTACTGTCCGATAT TCAACATGACCCGACAATGCGTCATCAGCATTCCCAGATGGCGGCGATTGCTGAACGGCTGGGTTCACCACAAACCCCGC AACAGATGGCCGCCAGAGTGTCTCATCGACAGGAAAACTCCCCCAGTTCGGACGTCGAACTCAGTAAAAAATCCCCGGGT TCGGATACCGAACTCAGTGTAAAACAGGGGGGCAAACCACCGAGTTCGCTTTCCGAACTCATGCTGAAATCAGTCACTTA CGGCGCATCAACCAAACCGAACTGTAACGTACGTTCTTTCACACAGAGTGTGAATAAAACAACGTACGTACCTGAGTTAC CGGCTGAACTGCAACACAGCATGGCGGCGGATGATTTGCGGCAGATAGCTGTCCAGCTTAAGGCATTGCCTGCAGATGCT GCTCGCCAGGTTCTGGAGAGTCTTGAGCAGACAATGGGCAAAGGCAGCCTGAATAACCCCACGGGCTGGCTGCTGGCGGT GATCAAGCGTGCCCGGAACGGTGAGCTGTATGCGAGTGCCAAACTCCCAGAACCTGTCAGGCCTGTTTCGCCACGCCAAA TACCTTGCCCTGCGGCGCCCGTAAAACCAGCAGGACCATCCCGCCAGCATCTGGCTTCGCGGGAGCATGTCAGCGACATT GTTGCGAAGTTACGTCTGGGAATGGCACGTGCAAAAAATAGGTCATAA
Upstream 100 bases:
>100_bases GCCTGAGTGCCGTTAGGCCGGATGCAGCAATGTCTGCACAACAACCGCTTGATGTCTTCGCCCTGTGGGCGGGGACAGCG TAAAAGGATGCGCAAAATCG
Downstream 100 bases:
>100_bases ATCTGGAGGGGTATTCGTGTTCAAAAAATGCACACTGTTGGTAGTGCCAGCACCGGTTAAAAACTAAACAGTTGAAGATC TGGCTAGTGTATCCAGAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 415; Mature: 414
Protein sequence:
>415_residues MSINKTPDDSLITFTLEQMNARLAERIGAEKHAGTPDVTNLRSGLLFMGNVHDSIPRRLLLDTRLSPLDKTAWIMIRLYA QQNQGAVFPTYDELQLQLASPFNGKASRETVSRVLLMLRLTGWLSLCRRVRDDKGRVKGNIYAQHDEPLSARDAETLDPT WLDTVAMGCAHKNRTVSQTAWSVLSDIQHDPTMRHQHSQMAAIAERLGSPQTPQQMAARVSHRQENSPSSDVELSKKSPG SDTELSVKQGGKPPSSLSELMLKSVTYGASTKPNCNVRSFTQSVNKTTYVPELPAELQHSMAADDLRQIAVQLKALPADA ARQVLESLEQTMGKGSLNNPTGWLLAVIKRARNGELYASAKLPEPVRPVSPRQIPCPAAPVKPAGPSRQHLASREHVSDI VAKLRLGMARAKNRS
Sequences:
>Translated_415_residues MSINKTPDDSLITFTLEQMNARLAERIGAEKHAGTPDVTNLRSGLLFMGNVHDSIPRRLLLDTRLSPLDKTAWIMIRLYA QQNQGAVFPTYDELQLQLASPFNGKASRETVSRVLLMLRLTGWLSLCRRVRDDKGRVKGNIYAQHDEPLSARDAETLDPT WLDTVAMGCAHKNRTVSQTAWSVLSDIQHDPTMRHQHSQMAAIAERLGSPQTPQQMAARVSHRQENSPSSDVELSKKSPG SDTELSVKQGGKPPSSLSELMLKSVTYGASTKPNCNVRSFTQSVNKTTYVPELPAELQHSMAADDLRQIAVQLKALPADA ARQVLESLEQTMGKGSLNNPTGWLLAVIKRARNGELYASAKLPEPVRPVSPRQIPCPAAPVKPAGPSRQHLASREHVSDI VAKLRLGMARAKNRS >Mature_414_residues SINKTPDDSLITFTLEQMNARLAERIGAEKHAGTPDVTNLRSGLLFMGNVHDSIPRRLLLDTRLSPLDKTAWIMIRLYAQ QNQGAVFPTYDELQLQLASPFNGKASRETVSRVLLMLRLTGWLSLCRRVRDDKGRVKGNIYAQHDEPLSARDAETLDPTW LDTVAMGCAHKNRTVSQTAWSVLSDIQHDPTMRHQHSQMAAIAERLGSPQTPQQMAARVSHRQENSPSSDVELSKKSPGS DTELSVKQGGKPPSSLSELMLKSVTYGASTKPNCNVRSFTQSVNKTTYVPELPAELQHSMAADDLRQIAVQLKALPADAA RQVLESLEQTMGKGSLNNPTGWLLAVIKRARNGELYASAKLPEPVRPVSPRQIPCPAAPVKPAGPSRQHLASREHVSDIV AKLRLGMARAKNRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45688; Mature: 45557
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSINKTPDDSLITFTLEQMNARLAERIGAEKHAGTPDVTNLRSGLLFMGNVHDSIPRRLL CCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCEEECCCHHHHHHHHH LDTRLSPLDKTAWIMIRLYAQQNQGAVFPTYDELQLQLASPFNGKASRETVSRVLLMLRL HHCCCCCCCHHHEEEEEEEECCCCCCCCCCHHHHHEEECCCCCCCHHHHHHHHHHHHHHH TGWLSLCRRVRDDKGRVKGNIYAQHDEPLSARDAETLDPTWLDTVAMGCAHKNRTVSQTA HHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHH WSVLSDIQHDPTMRHQHSQMAAIAERLGSPQTPQQMAARVSHRQENSPSSDVELSKKSPG HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEECCCCCC SDTELSVKQGGKPPSSLSELMLKSVTYGASTKPNCNVRSFTQSVNKTTYVPELPAELQHS CCCEEEHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHH MAADDLRQIAVQLKALPADAARQVLESLEQTMGKGSLNNPTGWLLAVIKRARNGELYASA HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEC KLPEPVRPVSPRQIPCPAAPVKPAGPSRQHLASREHVSDIVAKLRLGMARAKNRS CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SINKTPDDSLITFTLEQMNARLAERIGAEKHAGTPDVTNLRSGLLFMGNVHDSIPRRLL CCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCEEECCCHHHHHHHHH LDTRLSPLDKTAWIMIRLYAQQNQGAVFPTYDELQLQLASPFNGKASRETVSRVLLMLRL HHCCCCCCCHHHEEEEEEEECCCCCCCCCCHHHHHEEECCCCCCCHHHHHHHHHHHHHHH TGWLSLCRRVRDDKGRVKGNIYAQHDEPLSARDAETLDPTWLDTVAMGCAHKNRTVSQTA HHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHH WSVLSDIQHDPTMRHQHSQMAAIAERLGSPQTPQQMAARVSHRQENSPSSDVELSKKSPG HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEECCCCCC SDTELSVKQGGKPPSSLSELMLKSVTYGASTKPNCNVRSFTQSVNKTTYVPELPAELQHS CCCEEEHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHH MAADDLRQIAVQLKALPADAARQVLESLEQTMGKGSLNNPTGWLLAVIKRARNGELYASA HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEC KLPEPVRPVSPRQIPCPAAPVKPAGPSRQHLASREHVSDIVAKLRLGMARAKNRS CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA