| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is creD [H]
Identifier: 157372128
GI number: 157372128
Start: 4314417
End: 4315781
Strand: Reverse
Name: creD [H]
Synonym: Spro_3894
Alternate gene names: 157372128
Gene position: 4315781-4314417 (Counterclockwise)
Preceding gene: 157372129
Following gene: 157372126
Centisome position: 79.21
GC content: 56.19
Gene sequence:
>1365_bases ATGATGAAATCGATACTGTTTTGGAAAATAACCACTCTGCTGGGACTAATGATTTTAATGATTATCCCGGTAACGATGTT AATGAATGTGATTGATGAGCGCAGCGGCTACCGCCAGAGCGTGGTTGGGCAGGTCAGTGAAAGCACCAGCCGGGCGCAGC GCATTTTGGGGCCGCTGATCGTCATCCCTTACAGCGAGCGGGAAGAGAAGACGGATGACAAGGGGCAGAAGGTGGTGCAG ATAGTTCGGCATCATCGCTATCTGCTGCCCGAGACGTTGCAGGTCAGCGGCAAGCCGAACGTGGAGGTGCGCAAGCTGGG CATTTACCAGACTCAGGTCTATCAGGGACCGTTGCAGTTTAAGGTGAAGTTTGGCCAGCCGGATGTGACAGACCTGCAGC GCAGCAATGTCGTGATTGGCCAGCCGTTCCTGCTGGTTTCGCTGAGCGATTCACGCGGCATCAAGAGCATCTCGCCGCTT AGCAGCGCAGAGTCTCAAACGGTGTTTGAACCGGGTACCCAGGTAAACGTGTTACCTCAGGGTATTCATGCACCGCTGAC GCTGCCCGCATTGCAAAAAGCGGGGCTGGATGCCGAGTTCACCCTGACGCTGGCCGGCACCAGCAGCCTGTCACTGGTAC CGCTCGGGCGTAGCAGCGAATTGACGTTGCAGAGTAATTGGCCACATCCGAATTTCCTCGGTAACTTCTTGCCGGACGAA CGCAAGGTGACGGAAAAAGGCTTCAGTGCCCGCTGGCGCAGCACCTGGTTTGCCAACAACATCAACAGTGCTTTCCATTA CGACGACGAAATTCTTGGCGAAGACAAGTTGCCAACCTTCAGCACCAGCCTGATTGAACCGGTCGATCATTATCAACTGA CCGAACGCGCGGTGAAGTATGCGGTGCTGTTTATCGGCCTGACATTTATGGCGTTCTTCCTGTTCGAAACCCTGACCGGC CTGCGGGTACACCCGATTCAGTACCTGCTGGTCGGCACGGCACTGGTGCTGTTCTACCTGATCCTGCTGGCATTCTCCGA GCATTTTGGCTTCGCCACCGCTTATCTGCTGGCCAGCATCGCCTGCAGTGGGTTGATCGCTTTTTACCTCAGCGCGGTAC TGCGTGGCAGGCTGCGGGGGGCGCTGTTCGCCGCCAGTCTGTTGATGTTGTATGGCGTGCTGTATCTGTTGCTGCAGTCG GAAGATAACGCGTTGGTGCTGGGGGCAGGGCTGTTGTTCGCTATTTTGGCGGGAATTATGCTGCTGACGCGTAAGTTGGA CTGGTATCAGGTGGCCGATCCGGCGCGCTTGAACGGAGAAACGCCAACCGGCGCGGAGGAGAGCCGCTTCCGGTTGTGGA AATAA
Upstream 100 bases:
>100_bases TTCACCTTATCGCTCTGACTTCACCGTCCCTTCACATAACCACATTCTGCTTTCACCCGAGGGCATTATCGTGACTCCAT TACCTACATGGAGCGCGGCG
Downstream 100 bases:
>100_bases GCATCGGACTGGGCGCGGCTACCGCGCCCACGGGCATTACAGCAGGGGTTCCATCTCCAGCAGGATCTGTTCGCACCACT GTTGCAGACGTTCTTCGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MMKSILFWKITTLLGLMILMIIPVTMLMNVIDERSGYRQSVVGQVSESTSRAQRILGPLIVIPYSEREEKTDDKGQKVVQ IVRHHRYLLPETLQVSGKPNVEVRKLGIYQTQVYQGPLQFKVKFGQPDVTDLQRSNVVIGQPFLLVSLSDSRGIKSISPL SSAESQTVFEPGTQVNVLPQGIHAPLTLPALQKAGLDAEFTLTLAGTSSLSLVPLGRSSELTLQSNWPHPNFLGNFLPDE RKVTEKGFSARWRSTWFANNINSAFHYDDEILGEDKLPTFSTSLIEPVDHYQLTERAVKYAVLFIGLTFMAFFLFETLTG LRVHPIQYLLVGTALVLFYLILLAFSEHFGFATAYLLASIACSGLIAFYLSAVLRGRLRGALFAASLLMLYGVLYLLLQS EDNALVLGAGLLFAILAGIMLLTRKLDWYQVADPARLNGETPTGAEESRFRLWK
Sequences:
>Translated_454_residues MMKSILFWKITTLLGLMILMIIPVTMLMNVIDERSGYRQSVVGQVSESTSRAQRILGPLIVIPYSEREEKTDDKGQKVVQ IVRHHRYLLPETLQVSGKPNVEVRKLGIYQTQVYQGPLQFKVKFGQPDVTDLQRSNVVIGQPFLLVSLSDSRGIKSISPL SSAESQTVFEPGTQVNVLPQGIHAPLTLPALQKAGLDAEFTLTLAGTSSLSLVPLGRSSELTLQSNWPHPNFLGNFLPDE RKVTEKGFSARWRSTWFANNINSAFHYDDEILGEDKLPTFSTSLIEPVDHYQLTERAVKYAVLFIGLTFMAFFLFETLTG LRVHPIQYLLVGTALVLFYLILLAFSEHFGFATAYLLASIACSGLIAFYLSAVLRGRLRGALFAASLLMLYGVLYLLLQS EDNALVLGAGLLFAILAGIMLLTRKLDWYQVADPARLNGETPTGAEESRFRLWK >Mature_454_residues MMKSILFWKITTLLGLMILMIIPVTMLMNVIDERSGYRQSVVGQVSESTSRAQRILGPLIVIPYSEREEKTDDKGQKVVQ IVRHHRYLLPETLQVSGKPNVEVRKLGIYQTQVYQGPLQFKVKFGQPDVTDLQRSNVVIGQPFLLVSLSDSRGIKSISPL SSAESQTVFEPGTQVNVLPQGIHAPLTLPALQKAGLDAEFTLTLAGTSSLSLVPLGRSSELTLQSNWPHPNFLGNFLPDE RKVTEKGFSARWRSTWFANNINSAFHYDDEILGEDKLPTFSTSLIEPVDHYQLTERAVKYAVLFIGLTFMAFFLFETLTG LRVHPIQYLLVGTALVLFYLILLAFSEHFGFATAYLLASIACSGLIAFYLSAVLRGRLRGALFAASLLMLYGVLYLLLQS EDNALVLGAGLLFAILAGIMLLTRKLDWYQVADPARLNGETPTGAEESRFRLWK
Specific function: Unknown
COG id: COG4452
COG function: function code V; Inner membrane protein involved in colicin E2 resistance
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790862, Length=459, Percent_Identity=44.6623093681917, Blast_Score=380, Evalue=1e-106,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010364 [H]
Pfam domain/function: PF06123 CreD [H]
EC number: NA
Molecular weight: Translated: 50592; Mature: 50592
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKSILFWKITTLLGLMILMIIPVTMLMNVIDERSGYRQSVVGQVSESTSRAQRILGPLI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEE VIPYSEREEKTDDKGQKVVQIVRHHRYLLPETLQVSGKPNVEVRKLGIYQTQVYQGPLQF EEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEECEEHHEECCCEEE KVKFGQPDVTDLQRSNVVIGQPFLLVSLSDSRGIKSISPLSSAESQTVFEPGTQVNVLPQ EEECCCCCHHHHHHCCEEEECCEEEEEECCCCCCCCCCCCCCCCCCCEECCCCEEEECCC GIHAPLTLPALQKAGLDAEFTLTLAGTSSLSLVPLGRSSELTLQSNWPHPNFLGNFLPDE CCCCCCCCHHHHHCCCCCEEEEEEECCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCH RKVTEKGFSARWRSTWFANNINSAFHYDDEILGEDKLPTFSTSLIEPVDHYQLTERAVKY HHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCHHHHHCHHHHHHHHHHHHHH AVLFIGLTFMAFFLFETLTGLRVHPIQYLLVGTALVLFYLILLAFSEHFGFATAYLLASI HHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ACSGLIAFYLSAVLRGRLRGALFAASLLMLYGVLYLLLQSEDNALVLGAGLLFAILAGIM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHH LLTRKLDWYQVADPARLNGETPTGAEESRFRLWK HHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MMKSILFWKITTLLGLMILMIIPVTMLMNVIDERSGYRQSVVGQVSESTSRAQRILGPLI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEE VIPYSEREEKTDDKGQKVVQIVRHHRYLLPETLQVSGKPNVEVRKLGIYQTQVYQGPLQF EEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEECEEHHEECCCEEE KVKFGQPDVTDLQRSNVVIGQPFLLVSLSDSRGIKSISPLSSAESQTVFEPGTQVNVLPQ EEECCCCCHHHHHHCCEEEECCEEEEEECCCCCCCCCCCCCCCCCCCEECCCCEEEECCC GIHAPLTLPALQKAGLDAEFTLTLAGTSSLSLVPLGRSSELTLQSNWPHPNFLGNFLPDE CCCCCCCCHHHHHCCCCCEEEEEEECCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCH RKVTEKGFSARWRSTWFANNINSAFHYDDEILGEDKLPTFSTSLIEPVDHYQLTERAVKY HHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCHHHHHCHHHHHHHHHHHHHH AVLFIGLTFMAFFLFETLTGLRVHPIQYLLVGTALVLFYLILLAFSEHFGFATAYLLASI HHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ACSGLIAFYLSAVLRGRLRGALFAASLLMLYGVLYLLLQSEDNALVLGAGLLFAILAGIM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHH LLTRKLDWYQVADPARLNGETPTGAEESRFRLWK HHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2835585; 3531171; 7610040; 9278503; 2984198 [H]