| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is slt [C]
Identifier: 157372112
GI number: 157372112
Start: 4292220
End: 4294916
Strand: Reverse
Name: slt [C]
Synonym: Spro_3877
Alternate gene names: 157372112
Gene position: 4294916-4292220 (Counterclockwise)
Preceding gene: 157372113
Following gene: 157372111
Centisome position: 78.82
GC content: 48.24
Gene sequence:
>2697_bases ATGCCAATCGTCCCAACGTATCAGCGTCAGTCTCAATCGCAGATGGCACCGGTTAACACTCAGGATTTGAGGATCCCGAA AGATAGCGCCTTCACTGCGCTGGCAGATGTAGGCGCGAAAGGGCTGGAGGTGTACCAGCAGGAGCGGCAAAAGGTCGATT TGGCTGATATGCAGGACAAACTCAATCAGTTTTCCCAGTATGCCGATGACTTGTACAACAACCCGCAGAATGGCCTGATC ACGTTGCAGGGAAAAAACGCTATCGGCCAAGGTGAAGCACGAGCTGGTCAGATATCAAATAAAGCAGCTGAGATACGTGA ATCTTTGCCCGAGTACATGCGCCCGGCGTTTGATCAACAGATCCAGCCGCTTGGCCGTAGTTATGGCAATAAATTTCGCC AGTATGATATTGGGCAGAAGCAACAGTATGAAGCTGGCCAACAGCAAGGCGTATTGAGTAATTTTTTAACTCAGGCTAAT GATCCTACACAGTTTCAGCCAGCGGTGCTTTCTGCTCGACAGGCGATAATGGATTATGGTGCTACTCATGGTCAGAGTCC GGAAGAGATAGAGGCAAATTGGCAGCAATGGTATCAAGGAGCAGCTAATTCAGCATTTAGCACTGCCTATACCAATATGT ATCAGCAGACCATGGGGCCGGATGGGGTAATTCCTGTAACGGATGGTGCAAATAGCGATCAATTATTCTCTGCAATGATT CGAGCAGAAAGTGGAGGCAACCAATTCGATAGTACTGGCTCGCCGCTTATGTCCTCAAAAGGAGCTGCTGGGATTGCTCA GGTAACAGAATCAACAGGACCCGAGGCTGCTCAGCTTGCTGGCTTGTCGTGGGATAGGGATAAGTGGCTGAATGACCCAC GCTACAACGCGACTATTGGGCATGCCTATTTTCAGTCACAGATGAAACGTTATGACGGAGATTCAGTGCTCGCTGTTGCC GCATATAATGCAGGTCAAGGTCAGGTTAACAAATGGATCGCGCAACTTGGTGATCCGCGCAAAGGTGAGATTTCATCTGC TGAATTCGTAGCCAAAATACCATTTGAAGAAACACGGAACTATGTATCAAAAGTAGTTGGTTCTGCCCCAGGAATTCCGG TCAACGCTTCTATTACTGGATTGATGAATACGCCATATTGGCAGGCTATGAGCCCTCAGAACAAATCAGCCGCAATGGCT AAAATTGCTGGGCTGTACGACCTTCAAAATTCAGCAGCACGTTTGAGTTTACAGAATAGAATGCAGGACGATGAAACGCG TGTTGAGCTTGGTCAGCCAGTGTCTGCACCAATTACAGAGCGAGAGTGGGTTTCCTCGATGCCGCTCAGTGCCACGCCGC AAGAGCGAATGCAATTACAGCAGTCATACCAACGCTACCAGCAAACCCTTGCTATGCAGGCAGCCTATCAAACGATTGTG CAAGGTGATGTACAGCAGGGCATGGCGGCAGTAAATGCTATGAAGCCAGATGTTAGCGATCCCGACTTTACGTTCAAACA GCAGCGATATGCGCAAGTGGCCAGTAAATATTCTCAAGTGCAGAAAGCCAGGGAAGATGACCCGGGCACATGGCTTCTTC AGAACTCTCCAGTTATCAAGGATGCCTATAACCAATTTTCTCAACGGCAGGTATCCGGCGAATACTTTGCCTCGCGTATT CGGGCTGAGAAAGAGCGGCTGGGGATCCGTAGCAAAGACATACTTCCGGCCGAGATGGTTAATAGTGTTCTGCACCAGAT CGATAGTAGCAATGAGCAAAGCGTGGCGGCCGTACAAGCTATTGCCCAGAGCTATGGGAGCCAAGCACCGGCTGTAATCG CGCAATTGCAGGGGAAATCGGGAAGTGCACTCAGTGTTGTCATGTCTGTTGATAATGCCAATGCAGCTAATGCATTGTTC CAAAACAGAAAGCTATCAACAGATGAATTAAAAAAGGCGTCTGGCACACAATCATCATCTGTTGAAAGCGAATGGTCGGA TCAGTTTGCTGATTTTGGTGTGTCACTGGCATCTCAAAGGGGTGGACTAAAGGCATATTCAGACTTCAATGAGCAAGGAA AGCGTCTTGCATACATCTATGCATCGCGCGGCATGGATGGGGCGTCTGCTGCCAAGATGGCATTCAATCAGATTGCTGGC GACCAATACGACTTTGAAGGCGCTTGGCGCCTGCCAAAATCATTAAACCTAAATGTTCGAGACATTACTGACGGAACAAA GAACTACCTGGAAAAACTAAAGCCAGAAGATATAGATCCGCAAGGTTTTGTGGGTGACTCTCGCTTACCCGCCGATGTTG GCAGAGCAATGGCGTTGTCCAGAATAAAAAACAATGCTGAATGGGTTACAAGTGAAGACGAAAAAGGGCTTTACCTCACA GCAGATCGAACCTATATCAACGGGGCTGATGGCAATCCAATATTTGTCCCATTCAAGGAACTTTCTCAGCTTGGAATTGC AGACAGAAGTTTCATTAATGCACGGCTCCATGAATTAAAAACCCCGGCAACTTTCACCCCTGCTGACGGAATGGATAATC GAACTATCAATAATGATTTGTCAGATGTCTACCGTAGCCTGCGTGGCGAACCTGCGAGAGAGTTTACTGGCTACCAGGAA CAGAATCCTGCGGAAAACACACTGGGTAATGCTCTTCAGCACAGGAGTGGTCAATGA
Upstream 100 bases:
>100_bases CAGGAGCGCAGTAAATCCCCCCTTGGTGTTGCGCCATCCCTCCAAGACATCGCCCGCGGCCTCATCCGCAAAGCATTGCA ACAAGTAGGAGAGTAGTTCC
Downstream 100 bases:
>100_bases CAATCTATACAACAAAGCCTGATTCATCAGTTACCAGGCCACTTACAAATTTAGAATCAGGACTTGGTGAAAGTCTATCG GCTGAATTTACCGAAGGATT
Product: lytic transglycosylase
Products: 1,6-Anhydrobond [C]
Alternate protein names: Soluble Lytic Murein Transglycosylase; Soluble Lytic Transglycosylase; Transglycosylase Slt Family; Lytic Transglycosylase; Slt Family Transglycosylase; Transglycosylase; Murein Transglycosylase Protein; Transglycosylase SLT Domain Protein; Lytic Murein Transglycosylase; Soluble Lytic Transglycosylase Domain-Containing Protein; Lytic Murein Transglycosylase Family Protein; Lytic Transglycosylase Domain-Containing Protein; MltE Protein; Secreted Protein
Number of amino acids: Translated: 898; Mature: 897
Protein sequence:
>898_residues MPIVPTYQRQSQSQMAPVNTQDLRIPKDSAFTALADVGAKGLEVYQQERQKVDLADMQDKLNQFSQYADDLYNNPQNGLI TLQGKNAIGQGEARAGQISNKAAEIRESLPEYMRPAFDQQIQPLGRSYGNKFRQYDIGQKQQYEAGQQQGVLSNFLTQAN DPTQFQPAVLSARQAIMDYGATHGQSPEEIEANWQQWYQGAANSAFSTAYTNMYQQTMGPDGVIPVTDGANSDQLFSAMI RAESGGNQFDSTGSPLMSSKGAAGIAQVTESTGPEAAQLAGLSWDRDKWLNDPRYNATIGHAYFQSQMKRYDGDSVLAVA AYNAGQGQVNKWIAQLGDPRKGEISSAEFVAKIPFEETRNYVSKVVGSAPGIPVNASITGLMNTPYWQAMSPQNKSAAMA KIAGLYDLQNSAARLSLQNRMQDDETRVELGQPVSAPITEREWVSSMPLSATPQERMQLQQSYQRYQQTLAMQAAYQTIV QGDVQQGMAAVNAMKPDVSDPDFTFKQQRYAQVASKYSQVQKAREDDPGTWLLQNSPVIKDAYNQFSQRQVSGEYFASRI RAEKERLGIRSKDILPAEMVNSVLHQIDSSNEQSVAAVQAIAQSYGSQAPAVIAQLQGKSGSALSVVMSVDNANAANALF QNRKLSTDELKKASGTQSSSVESEWSDQFADFGVSLASQRGGLKAYSDFNEQGKRLAYIYASRGMDGASAAKMAFNQIAG DQYDFEGAWRLPKSLNLNVRDITDGTKNYLEKLKPEDIDPQGFVGDSRLPADVGRAMALSRIKNNAEWVTSEDEKGLYLT ADRTYINGADGNPIFVPFKELSQLGIADRSFINARLHELKTPATFTPADGMDNRTINNDLSDVYRSLRGEPAREFTGYQE QNPAENTLGNALQHRSGQ
Sequences:
>Translated_898_residues MPIVPTYQRQSQSQMAPVNTQDLRIPKDSAFTALADVGAKGLEVYQQERQKVDLADMQDKLNQFSQYADDLYNNPQNGLI TLQGKNAIGQGEARAGQISNKAAEIRESLPEYMRPAFDQQIQPLGRSYGNKFRQYDIGQKQQYEAGQQQGVLSNFLTQAN DPTQFQPAVLSARQAIMDYGATHGQSPEEIEANWQQWYQGAANSAFSTAYTNMYQQTMGPDGVIPVTDGANSDQLFSAMI RAESGGNQFDSTGSPLMSSKGAAGIAQVTESTGPEAAQLAGLSWDRDKWLNDPRYNATIGHAYFQSQMKRYDGDSVLAVA AYNAGQGQVNKWIAQLGDPRKGEISSAEFVAKIPFEETRNYVSKVVGSAPGIPVNASITGLMNTPYWQAMSPQNKSAAMA KIAGLYDLQNSAARLSLQNRMQDDETRVELGQPVSAPITEREWVSSMPLSATPQERMQLQQSYQRYQQTLAMQAAYQTIV QGDVQQGMAAVNAMKPDVSDPDFTFKQQRYAQVASKYSQVQKAREDDPGTWLLQNSPVIKDAYNQFSQRQVSGEYFASRI RAEKERLGIRSKDILPAEMVNSVLHQIDSSNEQSVAAVQAIAQSYGSQAPAVIAQLQGKSGSALSVVMSVDNANAANALF QNRKLSTDELKKASGTQSSSVESEWSDQFADFGVSLASQRGGLKAYSDFNEQGKRLAYIYASRGMDGASAAKMAFNQIAG DQYDFEGAWRLPKSLNLNVRDITDGTKNYLEKLKPEDIDPQGFVGDSRLPADVGRAMALSRIKNNAEWVTSEDEKGLYLT ADRTYINGADGNPIFVPFKELSQLGIADRSFINARLHELKTPATFTPADGMDNRTINNDLSDVYRSLRGEPAREFTGYQE QNPAENTLGNALQHRSGQ >Mature_897_residues PIVPTYQRQSQSQMAPVNTQDLRIPKDSAFTALADVGAKGLEVYQQERQKVDLADMQDKLNQFSQYADDLYNNPQNGLIT LQGKNAIGQGEARAGQISNKAAEIRESLPEYMRPAFDQQIQPLGRSYGNKFRQYDIGQKQQYEAGQQQGVLSNFLTQAND PTQFQPAVLSARQAIMDYGATHGQSPEEIEANWQQWYQGAANSAFSTAYTNMYQQTMGPDGVIPVTDGANSDQLFSAMIR AESGGNQFDSTGSPLMSSKGAAGIAQVTESTGPEAAQLAGLSWDRDKWLNDPRYNATIGHAYFQSQMKRYDGDSVLAVAA YNAGQGQVNKWIAQLGDPRKGEISSAEFVAKIPFEETRNYVSKVVGSAPGIPVNASITGLMNTPYWQAMSPQNKSAAMAK IAGLYDLQNSAARLSLQNRMQDDETRVELGQPVSAPITEREWVSSMPLSATPQERMQLQQSYQRYQQTLAMQAAYQTIVQ GDVQQGMAAVNAMKPDVSDPDFTFKQQRYAQVASKYSQVQKAREDDPGTWLLQNSPVIKDAYNQFSQRQVSGEYFASRIR AEKERLGIRSKDILPAEMVNSVLHQIDSSNEQSVAAVQAIAQSYGSQAPAVIAQLQGKSGSALSVVMSVDNANAANALFQ NRKLSTDELKKASGTQSSSVESEWSDQFADFGVSLASQRGGLKAYSDFNEQGKRLAYIYASRGMDGASAAKMAFNQIAGD QYDFEGAWRLPKSLNLNVRDITDGTKNYLEKLKPEDIDPQGFVGDSRLPADVGRAMALSRIKNNAEWVTSEDEKGLYLTA DRTYINGADGNPIFVPFKELSQLGIADRSFINARLHELKTPATFTPADGMDNRTINNDLSDVYRSLRGEPAREFTGYQEQ NPAENTLGNALQHRSGQ
Specific function: Murein-Degrading Enzyme. Catalyzes The Cleavage Of The Glycosidic Bonds Between N-Acetylmuramic Acid And N- Acetylglucosamine Residues In Peptidoglycan. May Play A Role In Recycling Of Muropeptides During Cell Elongation And/Or Cell Division. [C]
COG id: COG0741
COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
Gene ontology:
Cell location: Periplasmic Protein. Tightly Associated With The Murein Sacculus [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082441, Length=164, Percent_Identity=30.4878048780488, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.2.1.- [C]
Molecular weight: Translated: 98722; Mature: 98591
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIVPTYQRQSQSQMAPVNTQDLRIPKDSAFTALADVGAKGLEVYQQERQKVDLADMQDK CCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHH LNQFSQYADDLYNNPQNGLITLQGKNAIGQGEARAGQISNKAAEIRESLPEYMRPAFDQQ HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH IQPLGRSYGNKFRQYDIGQKQQYEAGQQQGVLSNFLTQANDPTQFQPAVLSARQAIMDYG HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC ATHGQSPEEIEANWQQWYQGAANSAFSTAYTNMYQQTMGPDGVIPVTDGANSDQLFSAMI CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHH RAESGGNQFDSTGSPLMSSKGAAGIAQVTESTGPEAAQLAGLSWDRDKWLNDPRYNATIG HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHCCCCCCHHHHCCCCCCCCHHH HAYFQSQMKRYDGDSVLAVAAYNAGQGQVNKWIAQLGDPRKGEISSAEFVAKIPFEETRN HHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHEEECCHHHHHH YVSKVVGSAPGIPVNASITGLMNTPYWQAMSPQNKSAAMAKIAGLYDLQNSAARLSLQNR HHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH MQDDETRVELGQPVSAPITEREWVSSMPLSATPQERMQLQQSYQRYQQTLAMQAAYQTIV CCCCHHHHHCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGDVQQGMAAVNAMKPDVSDPDFTFKQQRYAQVASKYSQVQKAREDDPGTWLLQNSPVIK HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHH DAYNQFSQRQVSGEYFASRIRAEKERLGIRSKDILPAEMVNSVLHQIDSSNEQSVAAVQA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH IAQSYGSQAPAVIAQLQGKSGSALSVVMSVDNANAANALFQNRKLSTDELKKASGTQSSS HHHHHCCCCCHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHCCCCCHHHHHHHCCCCCCC VESEWSDQFADFGVSLASQRGGLKAYSDFNEQGKRLAYIYASRGMDGASAAKMAFNQIAG HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHCC DQYDFEGAWRLPKSLNLNVRDITDGTKNYLEKLKPEDIDPQGFVGDSRLPADVGRAMALS CCCCCCCHHCCCCCCCCCEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH RIKNNAEWVTSEDEKGLYLTADRTYINGADGNPIFVPFKELSQLGIADRSFINARLHELK HHHCCCCCCCCCCCCCEEEEECCEEEECCCCCEEEEEHHHHHHCCCHHHHHHHHHHHHHC TPATFTPADGMDNRTINNDLSDVYRSLRGEPAREFTGYQEQNPAENTLGNALQHRSGQ CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure PIVPTYQRQSQSQMAPVNTQDLRIPKDSAFTALADVGAKGLEVYQQERQKVDLADMQDK CCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHH LNQFSQYADDLYNNPQNGLITLQGKNAIGQGEARAGQISNKAAEIRESLPEYMRPAFDQQ HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH IQPLGRSYGNKFRQYDIGQKQQYEAGQQQGVLSNFLTQANDPTQFQPAVLSARQAIMDYG HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC ATHGQSPEEIEANWQQWYQGAANSAFSTAYTNMYQQTMGPDGVIPVTDGANSDQLFSAMI CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHH RAESGGNQFDSTGSPLMSSKGAAGIAQVTESTGPEAAQLAGLSWDRDKWLNDPRYNATIG HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHCCCCCCHHHHCCCCCCCCHHH HAYFQSQMKRYDGDSVLAVAAYNAGQGQVNKWIAQLGDPRKGEISSAEFVAKIPFEETRN HHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHEEECCHHHHHH YVSKVVGSAPGIPVNASITGLMNTPYWQAMSPQNKSAAMAKIAGLYDLQNSAARLSLQNR HHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH MQDDETRVELGQPVSAPITEREWVSSMPLSATPQERMQLQQSYQRYQQTLAMQAAYQTIV CCCCHHHHHCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGDVQQGMAAVNAMKPDVSDPDFTFKQQRYAQVASKYSQVQKAREDDPGTWLLQNSPVIK HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHH DAYNQFSQRQVSGEYFASRIRAEKERLGIRSKDILPAEMVNSVLHQIDSSNEQSVAAVQA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH IAQSYGSQAPAVIAQLQGKSGSALSVVMSVDNANAANALFQNRKLSTDELKKASGTQSSS HHHHHCCCCCHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHCCCCCHHHHHHHCCCCCCC VESEWSDQFADFGVSLASQRGGLKAYSDFNEQGKRLAYIYASRGMDGASAAKMAFNQIAG HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHCC DQYDFEGAWRLPKSLNLNVRDITDGTKNYLEKLKPEDIDPQGFVGDSRLPADVGRAMALS CCCCCCCHHCCCCCCCCCEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH RIKNNAEWVTSEDEKGLYLTADRTYINGADGNPIFVPFKELSQLGIADRSFINARLHELK HHHCCCCCCCCCCCCCEEEEECCEEEECCCCCEEEEEHHHHHHCCCHHHHHHHHHHHHHC TPATFTPADGMDNRTINNDLSDVYRSLRGEPAREFTGYQEQNPAENTLGNALQHRSGQ CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond Between N-Acetylmuramic Acid And N-Acetylglucosamine Residues, Thereby Conserving The Energy In A Newly Synthesized 1,6-Anhydrobond In The Muramic Acid Residue. [C]
General reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA