| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157372111
Identifier: 157372111
GI number: 157372111
Start: 4290535
End: 4292223
Strand: Reverse
Name: 157372111
Synonym: Spro_3876
Alternate gene names: NA
Gene position: 4292223-4290535 (Counterclockwise)
Preceding gene: 157372112
Following gene: 157372110
Centisome position: 78.77
GC content: 49.5
Gene sequence:
>1689_bases ATGACAATCTATACAACAAAGCCTGATTCATCAGTTACCAGGCCACTTACAAATTTAGAATCAGGACTTGGTGAAAGTCT ATCGGCTGAATTTACCGAAGGATTTAGGGAAGGCCCTCTAAACTCATGGGCGCGCGCATCGCAAGCTGATGCATTGAACA TGGACCCTGAATCACCGCGGATGACGAAAGAAGACGCCGAGGCCGGTTTCAAAACCTACGGCGTAAAGTCTATTAATGTC CCACCACAAGGGATTAGCAAGGCATTCTACGACAACGTAATTTCTGAAACTCGTAACCGACTTGAGCGAGAAGCAGTTAT TCAGTCAGCTCCGTCAGGAATCCTTTCCTCCCCGCTGAAGTTTGTTGCTAACCTCGGCGGTAATATGGTTGACCCGGGTA ACCTTGCTATTGGTCTTGTTCCATTCTTCGGGCAAGCAAGATCAGCAACAATGCTCGGAAGGGTTGCGGAACGTTTTGGG CAGGGCACCGTTATGGGGGGCGTGCAAACTGCAGCCACACTACCATTTACCGCTATGGGTGCCGCGGCGGAGGGGGACAA TTACACCATTGGTGATGCAGGCGGAAACTTGCTGATGGGGATGATCGCGGGTGGTGCACTTCATGCTGGCGGTGGTTTTA TTGCGGATATGGTCCGTGGCCGCCGTCAGGCATCAGCTCCTGGCGCTTTTGAAGCAGGGGATCCAGCCATTATCCCTGTT GATTCGGCTATGCCTGTGGAAGCAATGCCATCCCCCCGCGCCTTAGATATCGTTCCAGCTGAGACCAGTCGGTCGGATTT GAATAACTCTATATCCAAAAGCATTGATGATTATGCGTATTCAACAGGATACAGCGATGTTGTTCCTGATTTTGTCGAAC AACGCCGAGCTATAGCTGGTCAGCAGATAGACAACGTTAATGCTTTACGGTCCGAGTTGACCAGGAATAATCAGCTTACC CAATCTTTAGATGCGACATTGAAAGAAAAGACCTCAGTTTACCAGGCTGAACGAATGAAATTTAAAGAGGCGCAAGCTAA GGCTCGCCAGGATATTGCTGATGAAAAAGCCGTACTGGAGTCGCGTAACATAGAACTTCAACAACAGATAGATAATCATG TCGAAGGGGCCAGGGCTGCACAAGATGTTGCGGATATAAGCAAGGGCGTCATACCCGATTCTGTCAAGCCGCTGATTGAA CAGCGTGCGCAGCAGATAAGAGAAGGATTGCAAGAAAGCCCGCTTGCCCGCGGTGTGCGAACGGCATCCCAGCGATTTGA TGATGCTGATATCTCCATTCGAGAAAACGCGATGCGTGCCGCTATAGCGCAGGCGAAGCGCGGTGATGATATCAACGTAG ATCCATTCTTTGACCTTATGGACCCGGTTAAAAGACCAACTGCCATTGAGCAGCTTTCAAGGCCATCCCAACCTCAGCCC GATCCCGTTGCTGGTTCTGTTAGTGCAGCAGCAGATCAACAGGCTAAGCGAGCAAACCGTGAAGATGCCGACATGCTTAA TGCTCAAGAGGATTTTGAGGCCGAATTAAACATTCTTAATGCGTTCGCTGATTCTGCAGACAATGCAAAGCTCAAAGAAG AACTTAAAACAATTCGTCAGGAAGCTAACGATACCAGCCTGCAAAAAGGTATCCAGGCCGCTGCTGGCTGCATGATAGGT AAAATGTGA
Upstream 100 bases:
>100_bases GTAGCCTGCGTGGCGAACCTGCGAGAGAGTTTACTGGCTACCAGGAACAGAATCCTGCGGAAAACACACTGGGTAATGCT CTTCAGCACAGGAGTGGTCA
Downstream 100 bases:
>100_bases TGGCAAACCGTTATTTGGCTGACTGTGAAAAAATAGTGATTAAGGCCGCCGGCCGTGATCTGTCAGACGATGAGCTGCAG GATGTGTTCGGGCAGCTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 562; Mature: 561
Protein sequence:
>562_residues MTIYTTKPDSSVTRPLTNLESGLGESLSAEFTEGFREGPLNSWARASQADALNMDPESPRMTKEDAEAGFKTYGVKSINV PPQGISKAFYDNVISETRNRLEREAVIQSAPSGILSSPLKFVANLGGNMVDPGNLAIGLVPFFGQARSATMLGRVAERFG QGTVMGGVQTAATLPFTAMGAAAEGDNYTIGDAGGNLLMGMIAGGALHAGGGFIADMVRGRRQASAPGAFEAGDPAIIPV DSAMPVEAMPSPRALDIVPAETSRSDLNNSISKSIDDYAYSTGYSDVVPDFVEQRRAIAGQQIDNVNALRSELTRNNQLT QSLDATLKEKTSVYQAERMKFKEAQAKARQDIADEKAVLESRNIELQQQIDNHVEGARAAQDVADISKGVIPDSVKPLIE QRAQQIREGLQESPLARGVRTASQRFDDADISIRENAMRAAIAQAKRGDDINVDPFFDLMDPVKRPTAIEQLSRPSQPQP DPVAGSVSAAADQQAKRANREDADMLNAQEDFEAELNILNAFADSADNAKLKEELKTIRQEANDTSLQKGIQAAAGCMIG KM
Sequences:
>Translated_562_residues MTIYTTKPDSSVTRPLTNLESGLGESLSAEFTEGFREGPLNSWARASQADALNMDPESPRMTKEDAEAGFKTYGVKSINV PPQGISKAFYDNVISETRNRLEREAVIQSAPSGILSSPLKFVANLGGNMVDPGNLAIGLVPFFGQARSATMLGRVAERFG QGTVMGGVQTAATLPFTAMGAAAEGDNYTIGDAGGNLLMGMIAGGALHAGGGFIADMVRGRRQASAPGAFEAGDPAIIPV DSAMPVEAMPSPRALDIVPAETSRSDLNNSISKSIDDYAYSTGYSDVVPDFVEQRRAIAGQQIDNVNALRSELTRNNQLT QSLDATLKEKTSVYQAERMKFKEAQAKARQDIADEKAVLESRNIELQQQIDNHVEGARAAQDVADISKGVIPDSVKPLIE QRAQQIREGLQESPLARGVRTASQRFDDADISIRENAMRAAIAQAKRGDDINVDPFFDLMDPVKRPTAIEQLSRPSQPQP DPVAGSVSAAADQQAKRANREDADMLNAQEDFEAELNILNAFADSADNAKLKEELKTIRQEANDTSLQKGIQAAAGCMIG KM >Mature_561_residues TIYTTKPDSSVTRPLTNLESGLGESLSAEFTEGFREGPLNSWARASQADALNMDPESPRMTKEDAEAGFKTYGVKSINVP PQGISKAFYDNVISETRNRLEREAVIQSAPSGILSSPLKFVANLGGNMVDPGNLAIGLVPFFGQARSATMLGRVAERFGQ GTVMGGVQTAATLPFTAMGAAAEGDNYTIGDAGGNLLMGMIAGGALHAGGGFIADMVRGRRQASAPGAFEAGDPAIIPVD SAMPVEAMPSPRALDIVPAETSRSDLNNSISKSIDDYAYSTGYSDVVPDFVEQRRAIAGQQIDNVNALRSELTRNNQLTQ SLDATLKEKTSVYQAERMKFKEAQAKARQDIADEKAVLESRNIELQQQIDNHVEGARAAQDVADISKGVIPDSVKPLIEQ RAQQIREGLQESPLARGVRTASQRFDDADISIRENAMRAAIAQAKRGDDINVDPFFDLMDPVKRPTAIEQLSRPSQPQPD PVAGSVSAAADQQAKRANREDADMLNAQEDFEAELNILNAFADSADNAKLKEELKTIRQEANDTSLQKGIQAAAGCMIGK M
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60235; Mature: 60104
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIYTTKPDSSVTRPLTNLESGLGESLSAEFTEGFREGPLNSWARASQADALNMDPESPR CEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCC MTKEDAEAGFKTYGVKSINVPPQGISKAFYDNVISETRNRLEREAVIQSAPSGILSSPLK CCHHHHHCCHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH FVANLGGNMVDPGNLAIGLVPFFGQARSATMLGRVAERFGQGTVMGGVQTAATLPFTAMG HHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEECCHHHHHHCCHHHHC AAAEGDNYTIGDAGGNLLMGMIAGGALHAGGGFIADMVRGRRQASAPGAFEAGDPAIIPV CCCCCCCEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEC DSAMPVEAMPSPRALDIVPAETSRSDLNNSISKSIDDYAYSTGYSDVVPDFVEQRRAIAG CCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH QQIDNVNALRSELTRNNQLTQSLDATLKEKTSVYQAERMKFKEAQAKARQDIADEKAVLE CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRNIELQQQIDNHVEGARAAQDVADISKGVIPDSVKPLIEQRAQQIREGLQESPLARGVR HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHH TASQRFDDADISIRENAMRAAIAQAKRGDDINVDPFFDLMDPVKRPTAIEQLSRPSQPQP HHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCC DPVAGSVSAAADQQAKRANREDADMLNAQEDFEAELNILNAFADSADNAKLKEELKTIRQ CCCCCCHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH EANDTSLQKGIQAAAGCMIGKM HCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TIYTTKPDSSVTRPLTNLESGLGESLSAEFTEGFREGPLNSWARASQADALNMDPESPR EEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCC MTKEDAEAGFKTYGVKSINVPPQGISKAFYDNVISETRNRLEREAVIQSAPSGILSSPLK CCHHHHHCCHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH FVANLGGNMVDPGNLAIGLVPFFGQARSATMLGRVAERFGQGTVMGGVQTAATLPFTAMG HHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEECCHHHHHHCCHHHHC AAAEGDNYTIGDAGGNLLMGMIAGGALHAGGGFIADMVRGRRQASAPGAFEAGDPAIIPV CCCCCCCEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEC DSAMPVEAMPSPRALDIVPAETSRSDLNNSISKSIDDYAYSTGYSDVVPDFVEQRRAIAG CCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH QQIDNVNALRSELTRNNQLTQSLDATLKEKTSVYQAERMKFKEAQAKARQDIADEKAVLE CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRNIELQQQIDNHVEGARAAQDVADISKGVIPDSVKPLIEQRAQQIREGLQESPLARGVR HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHH TASQRFDDADISIRENAMRAAIAQAKRGDDINVDPFFDLMDPVKRPTAIEQLSRPSQPQP HHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCC DPVAGSVSAAADQQAKRANREDADMLNAQEDFEAELNILNAFADSADNAKLKEELKTIRQ CCCCCCHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH EANDTSLQKGIQAAAGCMIGKM HCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA