Click here to switch to the map view.

The map label for this gene is yaeJ [H]

Identifier: 157371995

GI number: 157371995

Start: 4156750

End: 4157163

Strand: Reverse

Name: yaeJ [H]

Synonym: Spro_3760

Alternate gene names: 157371995

Gene position: 4157163-4156750 (Counterclockwise)

Preceding gene: 157371996

Following gene: 157371994

Centisome position: 76.29

GC content: 54.11

Gene sequence:

>414_bases
GTGCTTGAACTGTCAAGAAATGTAGCCATACCGGATAACGAAGTGGAATTGACGGCGATCCGCGCGCAGGGCGCGGGTGG
CCAGCACGTGAACAAAACCTCAACGGCTATCCATTTGCGCTTTGACATCCGGGCATCCAGCCTGCCAGAGTATTATAAGG
AAAGGCTGCTGGCCCTGAATAATCATTTAATTACCGCCGATGGCGTGGTGATTATCAAAGCGCAGGAATATCGCAGTCAG
GAATTAAACCGCGAGGCGGCGTTGGCCAGACTGGTCACTTTGATCCAGCAGGCGATGGTGGTAGAAAAAACTCGCCGGGC
GACCAAGCCCACCAAAGGGGCAAAATTACGTCGTCTGGAAGGCAAGGTACGGAAAGGCGCGACTAAAGCGCTGCGCGGCA
AGATCCGCACTTAA

Upstream 100 bases:

>100_bases
GCTGCAGGCCACGCTGCAAGAGGGAACTATCTGGCTTTCCGATGCTCAGAATAGTCTGGAAATCCAGTTTGCCGAGTGGC
AACAGGCGCAGGTGTGACCG

Downstream 100 bases:

>100_bases
GGACACATGAACACAGTAGGAGAATAACTGTGAAGAAAATAACACTGGCCCTGTTTTTAGCGGCAGGGGCACTTTCGTTA
CTGGGATGTAATAACCACTT

Product: peptidyl-tRNA hydrolase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MLELSRNVAIPDNEVELTAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLALNNHLITADGVVIIKAQEYRSQ
ELNREAALARLVTLIQQAMVVEKTRRATKPTKGAKLRRLEGKVRKGATKALRGKIRT

Sequences:

>Translated_137_residues
MLELSRNVAIPDNEVELTAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLALNNHLITADGVVIIKAQEYRSQ
ELNREAALARLVTLIQQAMVVEKTRRATKPTKGAKLRRLEGKVRKGATKALRGKIRT
>Mature_137_residues
MLELSRNVAIPDNEVELTAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLALNNHLITADGVVIIKAQEYRSQ
ELNREAALARLVTLIQQAMVVEKTRRATKPTKGAKLRRLEGKVRKGATKALRGKIRT

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=137, Percent_Identity=70.8029197080292, Blast_Score=207, Evalue=3e-55,
Organism=Drosophila melanogaster, GI19921098, Length=93, Percent_Identity=38.7096774193548, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 15295; Mature: 15295

Theoretical pI: Translated: 11.29; Mature: 11.29

Prosite motif: PS00745 RF_PROK_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLELSRNVAIPDNEVELTAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLALN
CCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHC
NHLITADGVVIIKAQEYRSQELNREAALARLVTLIQQAMVVEKTRRATKPTKGAKLRRLE
CCEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
GKVRKGATKALRGKIRT
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLELSRNVAIPDNEVELTAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLALN
CCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHC
NHLITADGVVIIKAQEYRSQELNREAALARLVTLIQQAMVVEKTRRATKPTKGAKLRRLE
CCEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
GKVRKGATKALRGKIRT
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7635807; 9278503; 7635808 [H]