Click here to switch to the map view.

The map label for this gene is 157371794

Identifier: 157371794

GI number: 157371794

Start: 3935664

End: 3935927

Strand: Reverse

Name: 157371794

Synonym: Spro_3559

Alternate gene names: NA

Gene position: 3935927-3935664 (Counterclockwise)

Preceding gene: 157371811

Following gene: 157371793

Centisome position: 72.23

GC content: 53.41

Gene sequence:

>264_bases
ATGGAAAGAGTCGCGAAGCTGTTTAAAAACGGCAGAAATCAGGCGGTGAGATTACCCGTGGAATTCGAATTCGATACAGA
TCGCGTGTATATCCGCCGCGATCGGGAGGGAAACGTGATTTTATCGAAATATCCGGCGAAACCTGATAGTTGGGCTCCGC
TGCTGCAAATGATCGCACAAACGCAGGTACCGCAGGACTTCCTGACCGCGGAGGATCGTCAGCAGGGGATGGCCACCCGC
GATCCCTTTGCCGGGGAAGAATAA

Upstream 100 bases:

>100_bases
GGCCCGCTGTGCAAGTGGTGGTTAAAAAATGATCGCAGTATCTTGGCATCGAAGCTCAACAGGCATATGCTTAGGCCTAT
GCCTGTCAGAGGAGATGAAA

Downstream 100 bases:

>100_bases
GCATGTATATGTTTGATACCAATACGGTCAGCCAGCTCTTTCGTCGGCACCCTCGTCTGCTCGGCTTAATGGAAAAGATC
CCGCCTTCTGCGGTCTGCAT

Product: SpoVT/AbrB domain-containing protein

Products: NA

Alternate protein names: SpoVT/AbrB Domain-Containing Protein; Virulence-Associated Protein; Virulence Protein; Virulence Associated Protein VapB; SpoVT/AbrB-Like Protein; Virulence Protein VagC

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MERVAKLFKNGRNQAVRLPVEFEFDTDRVYIRRDREGNVILSKYPAKPDSWAPLLQMIAQTQVPQDFLTAEDRQQGMATR
DPFAGEE

Sequences:

>Translated_87_residues
MERVAKLFKNGRNQAVRLPVEFEFDTDRVYIRRDREGNVILSKYPAKPDSWAPLLQMIAQTQVPQDFLTAEDRQQGMATR
DPFAGEE
>Mature_87_residues
MERVAKLFKNGRNQAVRLPVEFEFDTDRVYIRRDREGNVILSKYPAKPDSWAPLLQMIAQTQVPQDFLTAEDRQQGMATR
DPFAGEE

Specific function: Unknown

COG id: COG4456

COG function: function code S; Virulence-associated protein and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10099; Mature: 10099

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERVAKLFKNGRNQAVRLPVEFEFDTDRVYIRRDREGNVILSKYPAKPDSWAPLLQMIAQ
CHHHHHHHHCCCCCEEECCEEECCCCCEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHH
TQVPQDFLTAEDRQQGMATRDPFAGEE
HCCCHHHHCCCHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MERVAKLFKNGRNQAVRLPVEFEFDTDRVYIRRDREGNVILSKYPAKPDSWAPLLQMIAQ
CHHHHHHHHCCCCCEEECCEEECCCCCEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHH
TQVPQDFLTAEDRQQGMATRDPFAGEE
HCCCHHHHCCCHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA