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The map label for this gene is yfdZ [H]

Identifier: 157371638

GI number: 157371638

Start: 3760588

End: 3761823

Strand: Reverse

Name: yfdZ [H]

Synonym: Spro_3401

Alternate gene names: 157371638

Gene position: 3761823-3760588 (Counterclockwise)

Preceding gene: 157371639

Following gene: 157371636

Centisome position: 69.04

GC content: 57.12

Gene sequence:

>1236_bases
ATGGCTGATAATAGTCCGCAACGCCGTTTCACGCGTATTGAACGTCTTCCCCCTTACGTATTCAACATCACCGCCGAACT
CAAGATGGCTGCGCGCCGTCGTGGCGAGGATATCATCGATTTCAGCATGGGTAACCCCGACGGGCCAACCCCGCCGCACA
TCGTGGAAAAGCTCTGTACCGTTGCCCAGCGTGACGATACCCATGGCTACTCCACTTCGCGGGGGATCCCGCGTTTGCGC
CGTGCCATTTCACGCTGGTATGCCGATCGCTACCAGGTGGAGATCGATCCCGAAAGCGAAGCCATTGTTACCATAGGTTC
AAAAGAAGGGCTGGCACACCTGATGCTGGCGACGCTCGACCACGGTGATACCGTGTTGGTGCCGAATCCGAGCTATCCGA
TCCACATTTACGGTGCGGTGATTGCCGGTGCTCAGGTGCGTTCGGTGCCGCTGGTGGAGGGAGTGGATTTCTTTGGTGAG
CTGGAGCGCGCCATTCGTGAAACCATTCCACGTCCGAAAATGATGATCCTCGGCTTCCCGTCAAACCCGACAGCCCAGTG
CGTAGAGCTGGACTTCTTTGAACGCGTGGTCGCGCTGGCCAAACAGTACGACGTGCTGGTGGTCCACGATCTGGCCTATG
CCGATATCGTTTATGACGGCTGGAAAGCGCCCTCGATTATGCAGGTACCCGGCGCCAAGGATATCGCGGTGGAGTTTTTC
ACCCTGTCGAAAAGTTACAATATGGCGGGCTGGCGCATCGGCTTTATGGTCGGTAACCCGGAGCTGGTCAACGCGCTGGC
GCGGATTAAGAGTTATCACGACTACGGGACCTTCACTCCGTTGCAGGTGGCTGCCATCGCCGCGTTGGAAGGCGATCAGC
AGTGCGTGCGGGATATTGCGGAACAGTACCGTCAGCGCCGCAATGTGCTGGTTAAAGGGCTGCATGAAGCGGGCTGGATG
GTGGAAAACCCGAAAGCGGCGATGTATGTCTGGGCAAAAATTCCCGAGCCTTATGCGCATCTCGGTTCACTGGAGTTTGC
CAAACGTCTGTTGGCGGAAGCCAAGGTGTGCGTATCGCCGGGCATTGGCTTTGGTGACTACGGTGACACCCACGTGCGTT
TCGCGCTGATAGAAAATCAGGATCGTATCCGTCAGGCAGTTCGCGGCATCAAAGCCATGTTCCGGGCTGATGGGCTGATC
AAACCGGCCAAGAGTAGCCCGGCAACTACCAAATAA

Upstream 100 bases:

>100_bases
CAAGCCAGTCGAGGCTGGGATATGTTCAATATCCGGTCAATCTTTAGGTTGGCCAGCGTCGCTCGGATGGTCCGGGCGCT
AACGTCTCTTCGAGGTATCT

Downstream 100 bases:

>100_bases
TCACTTCAGGCCGGCGTATTCACGCCGGTTTTTTACTGATGTTGGCTCGGTTGGGATTGCGTCGGCGGCATGGCACACCG
GCTATCACTGAGCCGCTCGA

Product: aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MADNSPQRRFTRIERLPPYVFNITAELKMAARRRGEDIIDFSMGNPDGPTPPHIVEKLCTVAQRDDTHGYSTSRGIPRLR
RAISRWYADRYQVEIDPESEAIVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFGE
LERAIRETIPRPKMMILGFPSNPTAQCVELDFFERVVALAKQYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFF
TLSKSYNMAGWRIGFMVGNPELVNALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYRQRRNVLVKGLHEAGWM
VENPKAAMYVWAKIPEPYAHLGSLEFAKRLLAEAKVCVSPGIGFGDYGDTHVRFALIENQDRIRQAVRGIKAMFRADGLI
KPAKSSPATTK

Sequences:

>Translated_411_residues
MADNSPQRRFTRIERLPPYVFNITAELKMAARRRGEDIIDFSMGNPDGPTPPHIVEKLCTVAQRDDTHGYSTSRGIPRLR
RAISRWYADRYQVEIDPESEAIVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFGE
LERAIRETIPRPKMMILGFPSNPTAQCVELDFFERVVALAKQYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFF
TLSKSYNMAGWRIGFMVGNPELVNALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYRQRRNVLVKGLHEAGWM
VENPKAAMYVWAKIPEPYAHLGSLEFAKRLLAEAKVCVSPGIGFGDYGDTHVRFALIENQDRIRQAVRGIKAMFRADGLI
KPAKSSPATTK
>Mature_410_residues
ADNSPQRRFTRIERLPPYVFNITAELKMAARRRGEDIIDFSMGNPDGPTPPHIVEKLCTVAQRDDTHGYSTSRGIPRLRR
AISRWYADRYQVEIDPESEAIVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFGEL
ERAIRETIPRPKMMILGFPSNPTAQCVELDFFERVVALAKQYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFT
LSKSYNMAGWRIGFMVGNPELVNALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYRQRRNVLVKGLHEAGWMV
ENPKAAMYVWAKIPEPYAHLGSLEFAKRLLAEAKVCVSPGIGFGDYGDTHVRFALIENQDRIRQAVRGIKAMFRADGLIK
PAKSSPATTK

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI56713254, Length=421, Percent_Identity=25.1781472684086, Blast_Score=119, Evalue=4e-27,
Organism=Homo sapiens, GI56713256, Length=421, Percent_Identity=25.1781472684086, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI95147551, Length=354, Percent_Identity=23.728813559322, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI169881279, Length=354, Percent_Identity=23.728813559322, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI169881281, Length=173, Percent_Identity=23.121387283237, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI1788722, Length=405, Percent_Identity=91.6049382716049, Blast_Score=772, Evalue=0.0,
Organism=Escherichia coli, GI1786816, Length=364, Percent_Identity=24.7252747252747, Blast_Score=108, Evalue=7e-25,
Organism=Escherichia coli, GI1788627, Length=402, Percent_Identity=25.3731343283582, Blast_Score=101, Evalue=9e-23,
Organism=Escherichia coli, GI1787710, Length=312, Percent_Identity=25.6410256410256, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1788332, Length=228, Percent_Identity=28.9473684210526, Blast_Score=65, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17567369, Length=398, Percent_Identity=24.1206030150754, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI71994472, Length=371, Percent_Identity=24.2587601078167, Blast_Score=115, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI71994476, Length=369, Percent_Identity=24.1192411924119, Blast_Score=115, Evalue=5e-26,
Organism=Saccharomyces cerevisiae, GI6320317, Length=349, Percent_Identity=25.214899713467, Blast_Score=90, Evalue=6e-19,
Organism=Saccharomyces cerevisiae, GI6322401, Length=390, Percent_Identity=19.7435897435897, Blast_Score=81, Evalue=4e-16,
Organism=Drosophila melanogaster, GI28573069, Length=409, Percent_Identity=24.6943765281174, Blast_Score=123, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24646114, Length=409, Percent_Identity=24.6943765281174, Blast_Score=123, Evalue=2e-28,
Organism=Drosophila melanogaster, GI28573067, Length=409, Percent_Identity=24.6943765281174, Blast_Score=123, Evalue=2e-28,
Organism=Drosophila melanogaster, GI28573065, Length=409, Percent_Identity=24.6943765281174, Blast_Score=123, Evalue=2e-28,
Organism=Drosophila melanogaster, GI45551451, Length=389, Percent_Identity=24.9357326478149, Blast_Score=75, Evalue=8e-14,
Organism=Drosophila melanogaster, GI24641770, Length=389, Percent_Identity=24.9357326478149, Blast_Score=75, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24641760, Length=389, Percent_Identity=24.9357326478149, Blast_Score=75, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24641768, Length=389, Percent_Identity=24.9357326478149, Blast_Score=75, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24641766, Length=389, Percent_Identity=24.9357326478149, Blast_Score=75, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24641764, Length=389, Percent_Identity=24.9357326478149, Blast_Score=75, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: 2.6.1.- [C]

Molecular weight: Translated: 45857; Mature: 45726

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADNSPQRRFTRIERLPPYVFNITAELKMAARRRGEDIIDFSMGNPDGPTPPHIVEKLCT
CCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHH
VAQRDDTHGYSTSRGIPRLRRAISRWYADRYQVEIDPESEAIVTIGSKEGLAHLMLATLD
HHCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCHHHHHHHEEC
HGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFGELERAIRETIPRPKMMILGFP
CCCEEEECCCCCCEEEEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECC
SNPTAQCVELDFFERVVALAKQYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFF
CCCCCHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHEECCCCCCCEEECCCCCCEEEEEE
TLSKSYNMAGWRIGFMVGNPELVNALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIA
EECCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHH
EQYRQRRNVLVKGLHEAGWMVENPKAAMYVWAKIPEPYAHLGSLEFAKRLLAEAKVCVSP
HHHHHHHHHHHHHHHHCCCEEECCCEEEEEEEECCCHHHHHCCHHHHHHHHHHHHHHCCC
GIGFGDYGDTHVRFALIENQDRIRQAVRGIKAMFRADGLIKPAKSSPATTK
CCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ADNSPQRRFTRIERLPPYVFNITAELKMAARRRGEDIIDFSMGNPDGPTPPHIVEKLCT
CCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHH
VAQRDDTHGYSTSRGIPRLRRAISRWYADRYQVEIDPESEAIVTIGSKEGLAHLMLATLD
HHCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCHHHHHHHEEC
HGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFGELERAIRETIPRPKMMILGFP
CCCEEEECCCCCCEEEEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECC
SNPTAQCVELDFFERVVALAKQYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFF
CCCCCHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHEECCCCCCCEEECCCCCCEEEEEE
TLSKSYNMAGWRIGFMVGNPELVNALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIA
EECCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHH
EQYRQRRNVLVKGLHEAGWMVENPKAAMYVWAKIPEPYAHLGSLEFAKRLLAEAKVCVSP
HHHHHHHHHHHHHHHHCCCEEECCCEEEEEEEECCCHHHHHCCHHHHHHHHHHHHHHCCC
GIGFGDYGDTHVRFALIENQDRIRQAVRGIKAMFRADGLIKPAKSSPATTK
CCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Pyridoxal Phosphate. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]