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The map label for this gene is ccmH [H]

Identifier: 157371621

GI number: 157371621

Start: 3745561

End: 3746034

Strand: Reverse

Name: ccmH [H]

Synonym: Spro_3384

Alternate gene names: 157371621

Gene position: 3746034-3745561 (Counterclockwise)

Preceding gene: 157371622

Following gene: 157371620

Centisome position: 68.75

GC content: 57.81

Gene sequence:

>474_bases
ATGAGGCTGATGACCCTGGTCTTCGCTCTGCTGCTGAGCTGGAGCGCGGCTGCGGCTATTGATACCTATCAGTTCAAATC
GGTGGAGCAGGAACAGCAATACCGTGAGCTGACCGAGCAGCTGCGCTGCCCGAAATGCCAGAACAACAGCATTGCCGACT
CTAACGCCATCATTGCGGCGGACATGCGCACCAAAGTGTATGAGCTGATGATGCAGGGGCAGAGTAAGCCGCAGATCATC
GATTACATGGTGGCGCGCTACGGTAATTTCGTTACCTACGAGCCGCCGGTGACTCCGGCGACGCTGATCCTGTGGCTTGG
CCCGTTGCTGTTTGTGCTGATCGGCGGGGCGGTAGTGATACTGCGCACTCGCCGTCGCCGCGCCGGTGCTGCTAACGCTA
ACGATGAATTCTCCGAGCAGGAGCAACAGCGTTTGGCAGCGCTGCTGAAAGAGACTGACAGGAAGAAACCCTAA

Upstream 100 bases:

>100_bases
ACGGACAAGGCATTATTCGCTATCGCCACGCCGGGGATATGAATGAGCGCGTCTGGCAGCAGGAAGTGTTGCCGCTGTAC
AAAAAATACGGGGGTGAGGC

Downstream 100 bases:

>100_bases
TGGCTTTTTGGCTGATTATTATTGTATTGCTGGTCGGCGCTGCGGCGTTACTGGTGGTGCCGGCGATGCGCCAAAGCGAC
AAAAGCACTGCCGCTAGCCG

Product: cytochrome C biogenesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MRLMTLVFALLLSWSAAAAIDTYQFKSVEQEQQYRELTEQLRCPKCQNNSIADSNAIIAADMRTKVYELMMQGQSKPQII
DYMVARYGNFVTYEPPVTPATLILWLGPLLFVLIGGAVVILRTRRRRAGAANANDEFSEQEQQRLAALLKETDRKKP

Sequences:

>Translated_157_residues
MRLMTLVFALLLSWSAAAAIDTYQFKSVEQEQQYRELTEQLRCPKCQNNSIADSNAIIAADMRTKVYELMMQGQSKPQII
DYMVARYGNFVTYEPPVTPATLILWLGPLLFVLIGGAVVILRTRRRRAGAANANDEFSEQEQQRLAALLKETDRKKP
>Mature_157_residues
MRLMTLVFALLLSWSAAAAIDTYQFKSVEQEQQYRELTEQLRCPKCQNNSIADSNAIIAADMRTKVYELMMQGQSKPQII
DYMVARYGNFVTYEPPVTPATLILWLGPLLFVLIGGAVVILRTRRRRAGAANANDEFSEQEQQRLAALLKETDRKKP

Specific function: May be required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase [H]

COG id: COG3088

COG function: function code O; Uncharacterized protein involved in biosynthesis of c-type cytochromes

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788522, Length=119, Percent_Identity=63.0252100840336, Blast_Score=167, Evalue=3e-43,
Organism=Escherichia coli, GI1790512, Length=91, Percent_Identity=41.7582417582418, Blast_Score=82, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005616
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF03918 CcmH [H]

EC number: NA

Molecular weight: Translated: 17843; Mature: 17843

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLMTLVFALLLSWSAAAAIDTYQFKSVEQEQQYRELTEQLRCPKCQNNSIADSNAIIAA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEH
DMRTKVYELMMQGQSKPQIIDYMVARYGNFVTYEPPVTPATLILWLGPLLFVLIGGAVVI
HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
LRTRRRRAGAANANDEFSEQEQQRLAALLKETDRKKP
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRLMTLVFALLLSWSAAAAIDTYQFKSVEQEQQYRELTEQLRCPKCQNNSIADSNAIIAA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEH
DMRTKVYELMMQGQSKPQIIDYMVARYGNFVTYEPPVTPATLILWLGPLLFVLIGGAVVI
HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
LRTRRRRAGAANANDEFSEQEQQRLAALLKETDRKKP
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 7635817 [H]