Click here to switch to the map view.

The map label for this gene is dedD [H]

Identifier: 157371567

GI number: 157371567

Start: 3685411

End: 3686160

Strand: Reverse

Name: dedD [H]

Synonym: Spro_3330

Alternate gene names: 157371567

Gene position: 3686160-3685411 (Counterclockwise)

Preceding gene: 157371568

Following gene: 157371566

Centisome position: 67.65

GC content: 60.13

Gene sequence:

>750_bases
GTGGCAAGTAAATTTCAAAACCGATTGGTCGGTACCGTGATTTTGGTCGCGCTGGGGGTGATTATCCTGCCAGGGCTGCT
GGACGGTAAAAAGAAACATTATGAAGACGAATTCGCCGCCATTCCATTGGTGCCGAAGGCCGGTGATGTGGAAGAAAACG
ACGTGGTGCCACCGGTAAGCCAACCGCTACCGGCACAGCCGCCGGAAGGCGCGGGCGCACTGGTTGAGCAGCAGGCGGCC
AATGAGGCAGCAGCGCAGCAGGCAGTTCGCCAACCGACGCAGCAGCCGACGCTGGTGACCCCGCCGGTCGAATCCCGTCC
ACAACCGACGCCGCAGCCGCAGGTGAAGCCTAAACCGGTAGAAACCAAACCGGTGGAAGTGAAGCCAAAACCGGTACCGC
AACCGAAACCGGTGGAGACGAAGCCGGTGGTGAAACCTGAGCCAACGCCAGTACCCAAGCCTGAGCCTGCACCCGTGCAG
AAACCGACGGAAGAGAAAGCGCCGGCAGGGCAGGCTTATGTGGTGCAGCTCGGTGCGCTGAAGAACGCCGCCAAGGTGAA
CGAGGTGGTGGCATCGCTCAGGCTGTCCGGTTACCGTGCCTTTACCGTGCCATCAACGCCGGTACAGGGCCAGATCACCC
GGATCTACGTCGGCCCGGATGCCTCAAAACAGAAGCTGCAGTCTTCTCTGTCCGCGTTGAACTCGATCAGTGGTTTGAGC
GGTCAGGTGAAGCCATACGGCGTACGTTAA

Upstream 100 bases:

>100_bases
GGCTATGCAGGACGCAGATATTCAGGATATTGTGATCGTCTGTGGATCGTTCCACACCGTTGCACAGGTTATGGCGGCGT
TAGACGAGCGGGGAGTGTGA

Downstream 100 bases:

>100_bases
GTTTATGGGGTGCAGCATGCTGTGCCCCATAATCGAGTCATGCCGATATAATCATTAAAAATAATGTGCCTTTCGTAGCT
GAAATGGCCTATGTAGGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MASKFQNRLVGTVILVALGVIILPGLLDGKKKHYEDEFAAIPLVPKAGDVEENDVVPPVSQPLPAQPPEGAGALVEQQAA
NEAAAQQAVRQPTQQPTLVTPPVESRPQPTPQPQVKPKPVETKPVEVKPKPVPQPKPVETKPVVKPEPTPVPKPEPAPVQ
KPTEEKAPAGQAYVVQLGALKNAAKVNEVVASLRLSGYRAFTVPSTPVQGQITRIYVGPDASKQKLQSSLSALNSISGLS
GQVKPYGVR

Sequences:

>Translated_249_residues
MASKFQNRLVGTVILVALGVIILPGLLDGKKKHYEDEFAAIPLVPKAGDVEENDVVPPVSQPLPAQPPEGAGALVEQQAA
NEAAAQQAVRQPTQQPTLVTPPVESRPQPTPQPQVKPKPVETKPVEVKPKPVPQPKPVETKPVVKPEPTPVPKPEPAPVQ
KPTEEKAPAGQAYVVQLGALKNAAKVNEVVASLRLSGYRAFTVPSTPVQGQITRIYVGPDASKQKLQSSLSALNSISGLS
GQVKPYGVR
>Mature_248_residues
ASKFQNRLVGTVILVALGVIILPGLLDGKKKHYEDEFAAIPLVPKAGDVEENDVVPPVSQPLPAQPPEGAGALVEQQAAN
EAAAQQAVRQPTQQPTLVTPPVESRPQPTPQPQVKPKPVETKPVEVKPKPVPQPKPVETKPVVKPEPTPVPKPEPAPVQK
PTEEKAPAGQAYVVQLGALKNAAKVNEVVASLRLSGYRAFTVPSTPVQGQITRIYVGPDASKQKLQSSLSALNSISGLSG
QVKPYGVR

Specific function: Unknown

COG id: COG3147

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082083, Length=247, Percent_Identity=51.8218623481781, Blast_Score=211, Evalue=3e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007730 [H]

Pfam domain/function: PF05036 SPOR [H]

EC number: NA

Molecular weight: Translated: 26340; Mature: 26208

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASKFQNRLVGTVILVALGVIILPGLLDGKKKHYEDEFAAIPLVPKAGDVEENDVVPPVS
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHEEECCCCCCCCCCCCCCCCCCC
QPLPAQPPEGAGALVEQQAANEAAAQQAVRQPTQQPTLVTPPVESRPQPTPQPQVKPKPV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCC
ETKPVEVKPKPVPQPKPVETKPVVKPEPTPVPKPEPAPVQKPTEEKAPAGQAYVVQLGAL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCEEEEEECHH
KNAAKVNEVVASLRLSGYRAFTVPSTPVQGQITRIYVGPDASKQKLQSSLSALNSISGLS
HHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCC
GQVKPYGVR
CCCCCCCCC
>Mature Secondary Structure 
ASKFQNRLVGTVILVALGVIILPGLLDGKKKHYEDEFAAIPLVPKAGDVEENDVVPPVS
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHEEECCCCCCCCCCCCCCCCCCC
QPLPAQPPEGAGALVEQQAANEAAAQQAVRQPTQQPTLVTPPVESRPQPTPQPQVKPKPV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCC
ETKPVEVKPKPVPQPKPVETKPVVKPEPTPVPKPEPAPVQKPTEEKAPAGQAYVVQLGAL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCEEEEEECHH
KNAAKVNEVVASLRLSGYRAFTVPSTPVQGQITRIYVGPDASKQKLQSSLSALNSISGLS
HHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCC
GQVKPYGVR
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3040734; 9205837; 9278503 [H]