Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is 157371529
Identifier: 157371529
GI number: 157371529
Start: 3643810
End: 3644673
Strand: Reverse
Name: 157371529
Synonym: Spro_3292
Alternate gene names: NA
Gene position: 3644673-3643810 (Counterclockwise)
Preceding gene: 157371530
Following gene: 157371528
Centisome position: 66.89
GC content: 56.48
Gene sequence:
>864_bases ATGGTTGCTTTGTGGATGGTTGTCGCCAGCGGGTTCTTTGCGCTGATGGGGGCCAGCATCAAACTGGCTTCGGCCAAAGT CGGCTTTTTCGACATCATTTTTTATCGCTCTGTGATTAACGTGCTGATCGTTGCCGCGTTAATTCAGGTTAAAAACCTCG GTTTTCGCACCCGGCATCTGGGTCTGCATATGAAACGCGCCGCCATCGGCAATGCGGCAATGTACTGTGGCTTCTACTCG CTGATCCATTTGCCGATCGCCACTGCCACCACGCTGGGCTACACCAACCCGATCTTTCAGTCGGCGATCGCCTTTGTCAC CTCCAAAGGCCAGTTGACCGGCAAACTGCTGTTCTCGGTGCTGCTGGGGTTTATTGGCATTCTGGTGCTGCTGCGGCCCG ATACGCCGAACGGTGAGTATGCCGCCACGCTGATTGGCCTGCTATCCGGCCTGCTGACGGCGCTGGCCTATTTTAACGTC GGCAAGCTGGTGCGCACGGGCGAGCCGGAGCTGCGGGTGGTGTTTTACTTCTCACTGGTGGGCACGATAGTGGGCGCCGT GATGACCACGGTGGTGGGGTTCAGTACGCTGGATAGCGCCATGATACTGTGCGTCTGCGCTATCGGCGTGTTCGGCAGCC TGGGGCAAATCACCATGACCCGTGCCTATGGCAGCGGTAATGCGGTGATAGTCAGCATTCTGTCCTACAGCACCATCATT TTCTCCACTCTGCTCGGTTATCTGCTGTTTGGCGAGAAACTGTCTTATATTGCCGCGGGCGGCATGGCGTTGATTATTCT TTCCGGTGCGCTGGCTATTTTGAAACGCGCCCCGGCGAAAGTCACCAAAGCTGAAGCCGTGTAA
Upstream 100 bases:
>100_bases TAGCCGTCGTCTTTCACACTGCGATGCTGTTGCCGTAGGGGCGAATAGGTTCGCCCCGTTTTATTTTTGTCGCCCATTGG GGCGGCACTCCGAGGAAATC
Downstream 100 bases:
>100_bases TTTTGCATTCAACAGAATGCATTAATGAATCACTATGATGCATTCTTGGCTATTTTGACGGTTATACCCGAAAGGTATGA TAAACGCGTTTCCTGATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MVALWMVVASGFFALMGASIKLASAKVGFFDIIFYRSVINVLIVAALIQVKNLGFRTRHLGLHMKRAAIGNAAMYCGFYS LIHLPIATATTLGYTNPIFQSAIAFVTSKGQLTGKLLFSVLLGFIGILVLLRPDTPNGEYAATLIGLLSGLLTALAYFNV GKLVRTGEPELRVVFYFSLVGTIVGAVMTTVVGFSTLDSAMILCVCAIGVFGSLGQITMTRAYGSGNAVIVSILSYSTII FSTLLGYLLFGEKLSYIAAGGMALIILSGALAILKRAPAKVTKAEAV
Sequences:
>Translated_287_residues MVALWMVVASGFFALMGASIKLASAKVGFFDIIFYRSVINVLIVAALIQVKNLGFRTRHLGLHMKRAAIGNAAMYCGFYS LIHLPIATATTLGYTNPIFQSAIAFVTSKGQLTGKLLFSVLLGFIGILVLLRPDTPNGEYAATLIGLLSGLLTALAYFNV GKLVRTGEPELRVVFYFSLVGTIVGAVMTTVVGFSTLDSAMILCVCAIGVFGSLGQITMTRAYGSGNAVIVSILSYSTII FSTLLGYLLFGEKLSYIAAGGMALIILSGALAILKRAPAKVTKAEAV >Mature_287_residues MVALWMVVASGFFALMGASIKLASAKVGFFDIIFYRSVINVLIVAALIQVKNLGFRTRHLGLHMKRAAIGNAAMYCGFYS LIHLPIATATTLGYTNPIFQSAIAFVTSKGQLTGKLLFSVLLGFIGILVLLRPDTPNGEYAATLIGLLSGLLTALAYFNV GKLVRTGEPELRVVFYFSLVGTIVGAVMTTVVGFSTLDSAMILCVCAIGVFGSLGQITMTRAYGSGNAVIVSILSYSTII FSTLLGYLLFGEKLSYIAAGGMALIILSGALAILKRAPAKVTKAEAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 30302; Mature: 30302
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVALWMVVASGFFALMGASIKLASAKVGFFDIIFYRSVINVLIVAALIQVKNLGFRTRHL CHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH GLHMKRAAIGNAAMYCGFYSLIHLPIATATTLGYTNPIFQSAIAFVTSKGQLTGKLLFSV HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHH LLGFIGILVLLRPDTPNGEYAATLIGLLSGLLTALAYFNVGKLVRTGEPELRVVFYFSLV HHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHH GTIVGAVMTTVVGFSTLDSAMILCVCAIGVFGSLGQITMTRAYGSGNAVIVSILSYSTII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEHHHHHHHHHH FSTLLGYLLFGEKLSYIAAGGMALIILSGALAILKRAPAKVTKAEAV HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHCCCC >Mature Secondary Structure MVALWMVVASGFFALMGASIKLASAKVGFFDIIFYRSVINVLIVAALIQVKNLGFRTRHL CHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH GLHMKRAAIGNAAMYCGFYSLIHLPIATATTLGYTNPIFQSAIAFVTSKGQLTGKLLFSV HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHH LLGFIGILVLLRPDTPNGEYAATLIGLLSGLLTALAYFNVGKLVRTGEPELRVVFYFSLV HHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHH GTIVGAVMTTVVGFSTLDSAMILCVCAIGVFGSLGQITMTRAYGSGNAVIVSILSYSTII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEHHHHHHHHHH FSTLLGYLLFGEKLSYIAAGGMALIILSGALAILKRAPAKVTKAEAV HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9252185 [H]