Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is gsiD [H]
Identifier: 157371394
GI number: 157371394
Start: 3473975
End: 3474865
Strand: Reverse
Name: gsiD [H]
Synonym: Spro_3155
Alternate gene names: 157371394
Gene position: 3474865-3473975 (Counterclockwise)
Preceding gene: 157371395
Following gene: 157371393
Centisome position: 63.77
GC content: 63.41
Gene sequence:
>891_bases ATGAGCAGTATTTCCTTTGAAAAGACCGTCGTGCCGGAGCGTGACCTGGGGGGCGTGGAAAGCGAAGGCACGTTATCGAC CAGCCGTTCACGTCGTCGACGCGTGCCGCTGACGTTGCTGCTGGCCTGGACGGTAATCGCCATTGCGGTGCTATGGGCGC TGGCCCCTCAGTTATTCACCGCTTACAGCGGCACTGAAGGCATCGCCGGGGCGCAGCGCCTGGCACCGGGTGGCGCACAC TGGCTGGGTACCGATCAACTGGGTCGCGACCTGTACGCACGCATTGTCTATGGTGCCTCGCAAACGCTGTCCGCGGCGCT GGTGGCGGTCGCATTGGGCTTGCTGCTGGGCACGGCACTGGGGCTGATTGCCGGTGCGGTGGGGGGCATTGCGGACGAGG CGGTGATGCGCTTTGTCGACGTCTTGCTGTCGATCCCTGGCCTGCTGCTGTCGCTGAGCATCATTATTTTACTGGGATTT GGCACGGTTAACGCCGCCATCGCCGTCGGTATTACCTCGGTCGCCAACTTTGCCCGCCTGGCGCGTGCCGAGGTGGTGCG GGTGCGCCACAGTGATTACGTCGAGGCGGCCTATGGCAGCGGCGGTACCTTCTGGGCGGTGCTGTGGCGGCACATCCTGC CGAACTCGCTGACGTCGGTGATTGCCTTCTCGGCGCTGCAGTTCGGCAGCGCTATTTTGGCGATCGCTACCCTGAGTTTT CTGGGTTATGGCACTCCGCCGCCGACGCCGGAGTGGGGACTGTTGATCGCCGAAGGGCGCAATTATATTTCCACCGCCTG GTGGTTGACCACTTTTCCGGGGTTGGCGGTAGTGGCGGTGGTGCTGGCGGCCAATCGCATTAGCCGTGCGCTGGGGAGAG GGCAACCATGA
Upstream 100 bases:
>100_bases TCGTCATTTCCGCCGCCGCTTTCGTCACTCTCAACCTGCTGGTCGATCTGCTGTTCCCACTGTTGGATCCACGGCTGAAA ACCCATACAGGAGCCGCCGT
Downstream 100 bases:
>100_bases GTATTCAGACGGCATTACAACGGGCGGCGGCCACGCCGGTGCTGGAGCTGGAGCAGGTGTCGATAGCCTATCAGGGGGCA ACCGGCAGCCAACGGGTGGT
Product: binding-protein-dependent transport systems inner membrane component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MSSISFEKTVVPERDLGGVESEGTLSTSRSRRRRVPLTLLLAWTVIAIAVLWALAPQLFTAYSGTEGIAGAQRLAPGGAH WLGTDQLGRDLYARIVYGASQTLSAALVAVALGLLLGTALGLIAGAVGGIADEAVMRFVDVLLSIPGLLLSLSIIILLGF GTVNAAIAVGITSVANFARLARAEVVRVRHSDYVEAAYGSGGTFWAVLWRHILPNSLTSVIAFSALQFGSAILAIATLSF LGYGTPPPTPEWGLLIAEGRNYISTAWWLTTFPGLAVVAVVLAANRISRALGRGQP
Sequences:
>Translated_296_residues MSSISFEKTVVPERDLGGVESEGTLSTSRSRRRRVPLTLLLAWTVIAIAVLWALAPQLFTAYSGTEGIAGAQRLAPGGAH WLGTDQLGRDLYARIVYGASQTLSAALVAVALGLLLGTALGLIAGAVGGIADEAVMRFVDVLLSIPGLLLSLSIIILLGF GTVNAAIAVGITSVANFARLARAEVVRVRHSDYVEAAYGSGGTFWAVLWRHILPNSLTSVIAFSALQFGSAILAIATLSF LGYGTPPPTPEWGLLIAEGRNYISTAWWLTTFPGLAVVAVVLAANRISRALGRGQP >Mature_295_residues SSISFEKTVVPERDLGGVESEGTLSTSRSRRRRVPLTLLLAWTVIAIAVLWALAPQLFTAYSGTEGIAGAQRLAPGGAHW LGTDQLGRDLYARIVYGASQTLSAALVAVALGLLLGTALGLIAGAVGGIADEAVMRFVDVLLSIPGLLLSLSIIILLGFG TVNAAIAVGITSVANFARLARAEVVRVRHSDYVEAAYGSGGTFWAVLWRHILPNSLTSVIAFSALQFGSAILAIATLSFL GYGTPPPTPEWGLLIAEGRNYISTAWWLTTFPGLAVVAVVLAANRISRALGRGQP
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1173
COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787760, Length=250, Percent_Identity=39.2, Blast_Score=185, Evalue=4e-48, Organism=Escherichia coli, GI1787054, Length=260, Percent_Identity=38.0769230769231, Blast_Score=176, Evalue=2e-45, Organism=Escherichia coli, GI1789964, Length=213, Percent_Identity=41.7840375586854, Blast_Score=146, Evalue=1e-36, Organism=Escherichia coli, GI1789889, Length=218, Percent_Identity=35.7798165137615, Blast_Score=130, Evalue=7e-32, Organism=Escherichia coli, GI1787498, Length=280, Percent_Identity=31.0714285714286, Blast_Score=110, Evalue=8e-26, Organism=Escherichia coli, GI1787549, Length=241, Percent_Identity=30.7053941908714, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1788505, Length=221, Percent_Identity=32.1266968325792, Blast_Score=98, Evalue=5e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30991; Mature: 30860
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSISFEKTVVPERDLGGVESEGTLSTSRSRRRRVPLTLLLAWTVIAIAVLWALAPQLFT CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH AYSGTEGIAGAQRLAPGGAHWLGTDQLGRDLYARIVYGASQTLSAALVAVALGLLLGTAL HHCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH GLIAGAVGGIADEAVMRFVDVLLSIPGLLLSLSIIILLGFGTVNAAIAVGITSVANFARL HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH ARAEVVRVRHSDYVEAAYGSGGTFWAVLWRHILPNSLTSVIAFSALQFGSAILAIATLSF HHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGYGTPPPTPEWGLLIAEGRNYISTAWWLTTFPGLAVVAVVLAANRISRALGRGQP HCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SSISFEKTVVPERDLGGVESEGTLSTSRSRRRRVPLTLLLAWTVIAIAVLWALAPQLFT CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH AYSGTEGIAGAQRLAPGGAHWLGTDQLGRDLYARIVYGASQTLSAALVAVALGLLLGTAL HHCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH GLIAGAVGGIADEAVMRFVDVLLSIPGLLLSLSIIILLGFGTVNAAIAVGITSVANFARL HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH ARAEVVRVRHSDYVEAAYGSGGTFWAVLWRHILPNSLTSVIAFSALQFGSAILAIATLSF HHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGYGTPPPTPEWGLLIAEGRNYISTAWWLTTFPGLAVVAVVLAANRISRALGRGQP HCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA