Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is yghW [H]
Identifier: 157371384
GI number: 157371384
Start: 3463851
End: 3464138
Strand: Reverse
Name: yghW [H]
Synonym: Spro_3145
Alternate gene names: 157371384
Gene position: 3464138-3463851 (Counterclockwise)
Preceding gene: 157371385
Following gene: 157371380
Centisome position: 63.58
GC content: 56.25
Gene sequence:
>288_bases ATGAACAATCACTTCGGCAGGGGGCTGATGGCCGGTTTGGCCGCGCAGAACGCCGGACCGGCTTCGGAGCTTTCCCGGTT TTGTTGTGACTACAAACGTGGCTTCGTGCTGGGGTATGCACACCATTTGGCGGAAAGCCTGGGTGACGAAAATCAGGCCG CATTCGAAGCAGGCTTGCTGTGCCGGGCGTACAGTCTCAATGGGGAAGTGATGAGCGAGTTCTTTTCTGGTGGCGCTAAT CGTCTGGCCGAAAAGTTTTTCTGCGCCGGATATAACCGCGAGCAGTAA
Upstream 100 bases:
>100_bases TATGCGGTCACATAACGAGGTAAAACTTTGTGAGTATGTCCAGTGGCGCAATAATCGTTATATAATTATTTATATAGCGA TTATTGAAAGAGGGGATCTC
Downstream 100 bases:
>100_bases AACCAGGCCTGACTATCTTATGGCCTGACGGCTCAGGCCATATTCAGTGCTGGGGCGAACGCAAGTTTCAGGATAAGGCA GCGGCAACATTGCGTAGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MNNHFGRGLMAGLAAQNAGPASELSRFCCDYKRGFVLGYAHHLAESLGDENQAAFEAGLLCRAYSLNGEVMSEFFSGGAN RLAEKFFCAGYNREQ
Sequences:
>Translated_95_residues MNNHFGRGLMAGLAAQNAGPASELSRFCCDYKRGFVLGYAHHLAESLGDENQAAFEAGLLCRAYSLNGEVMSEFFSGGAN RLAEKFFCAGYNREQ >Mature_95_residues MNNHFGRGLMAGLAAQNAGPASELSRFCCDYKRGFVLGYAHHLAESLGDENQAAFEAGLLCRAYSLNGEVMSEFFSGGAN RLAEKFFCAGYNREQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789372, Length=94, Percent_Identity=51.063829787234, Blast_Score=101, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022574 - ProDom: PD065638 [H]
Pfam domain/function: PF11115 DUF2623 [H]
EC number: NA
Molecular weight: Translated: 10335; Mature: 10335
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNHFGRGLMAGLAAQNAGPASELSRFCCDYKRGFVLGYAHHLAESLGDENQAAFEAGLL CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHH CRAYSLNGEVMSEFFSGGANRLAEKFFCAGYNREQ HHHHCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNNHFGRGLMAGLAAQNAGPASELSRFCCDYKRGFVLGYAHHLAESLGDENQAAFEAGLL CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHH CRAYSLNGEVMSEFFSGGANRLAEKFFCAGYNREQ HHHHCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]