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The map label for this gene is yddQ [H]

Identifier: 157371347

GI number: 157371347

Start: 3419825

End: 3420511

Strand: Reverse

Name: yddQ [H]

Synonym: Spro_3108

Alternate gene names: 157371347

Gene position: 3420511-3419825 (Counterclockwise)

Preceding gene: 157371350

Following gene: 157371346

Centisome position: 62.77

GC content: 54.29

Gene sequence:

>687_bases
ATGAAAAAACTGATTTCCGGTACTGCACTGGCACTCTCGATGGCCACCTCCAGCCTGGGTTTTGCCGATGATAAGCAAAG
GGCGCCTACCATTCGCACCATGAGCGGCGCGCAGGCAAGTACATCTTTACCGGCTAACGCTACAGCGCTATTGGTGATTG
ATTTTCAGAATGAATACTTCGTCGGCAAGATGCCCATCCCCGACGGAAATAAAGCGCTGATGAACACGCAACGGTTGGTC
AGTTTTGCCCATCAGCACAAGATGCCGGTGTTTTTTATTCGACATATTGGCCCGGCAAATGGGCCGTTGTTTGCCGAAGG
TAGCAAGTTCGCCGAGTTCCATCCGGATCTGCAGCCGTCCGGCATTGATCGGGTGATCACCAAAGCCACCCCCAGTTCAT
TTGTGGGCACCGATCTGGATAAGCAACTTAAGCAGGCGGGTATCAAGAAGCTGGTAGTGAGTGGGTTGATGACCCATATG
TGCGTCTCTTCAACGGCGCGCGATGCGGTGCCGTTGGGCTATGAGGTGATTATTCCCGAGGATGCCACCGCCACCCGCGA
TCTGGCTACCTGGGATAACCAAATTGTGAGTCACGCCGTGCTGCAACGCGCTGCGCTGGCCGGGGTAGCCGATGTGTTTG
CTGAAATCAAAACCACCGATCAGGTCTTGGCGCTGCCGGTGAATTAA

Upstream 100 bases:

>100_bases
TTAGACTACCTGTTGCCATATCACTGCAACCTGCAGAATTGAACCCGACCACAGCAGGAAACGACGTGCTGTTTTGTTGT
TCTCACAAGGATAAACCAAA

Downstream 100 bases:

>100_bases
GCGGTCCTCGGGGAAGCAGGCCGCCGGCCACTTTGCAATATTTCATGGCTCGCCTAAGCTGATTTCAACCATCACTTTTT
TATGGGTAATCACTATGTTG

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MKKLISGTALALSMATSSLGFADDKQRAPTIRTMSGAQASTSLPANATALLVIDFQNEYFVGKMPIPDGNKALMNTQRLV
SFAHQHKMPVFFIRHIGPANGPLFAEGSKFAEFHPDLQPSGIDRVITKATPSSFVGTDLDKQLKQAGIKKLVVSGLMTHM
CVSSTARDAVPLGYEVIIPEDATATRDLATWDNQIVSHAVLQRAALAGVADVFAEIKTTDQVLALPVN

Sequences:

>Translated_228_residues
MKKLISGTALALSMATSSLGFADDKQRAPTIRTMSGAQASTSLPANATALLVIDFQNEYFVGKMPIPDGNKALMNTQRLV
SFAHQHKMPVFFIRHIGPANGPLFAEGSKFAEFHPDLQPSGIDRVITKATPSSFVGTDLDKQLKQAGIKKLVVSGLMTHM
CVSSTARDAVPLGYEVIIPEDATATRDLATWDNQIVSHAVLQRAALAGVADVFAEIKTTDQVLALPVN
>Mature_228_residues
MKKLISGTALALSMATSSLGFADDKQRAPTIRTMSGAQASTSLPANATALLVIDFQNEYFVGKMPIPDGNKALMNTQRLV
SFAHQHKMPVFFIRHIGPANGPLFAEGSKFAEFHPDLQPSGIDRVITKATPSSFVGTDLDKQLKQAGIKKLVVSGLMTHM
CVSSTARDAVPLGYEVIIPEDATATRDLATWDNQIVSHAVLQRAALAGVADVFAEIKTTDQVLALPVN

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

Organism=Escherichia coli, GI87081992, Length=171, Percent_Identity=29.8245614035088, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI87081820, Length=139, Percent_Identity=32.3741007194245, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 24402; Mature: 24402

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLISGTALALSMATSSLGFADDKQRAPTIRTMSGAQASTSLPANATALLVIDFQNEYF
CCCHHCCHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEEEEECCCEE
VGKMPIPDGNKALMNTQRLVSFAHQHKMPVFFIRHIGPANGPLFAEGSKFAEFHPDLQPS
EEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEECCCCHHHCCCCCCCC
GIDRVITKATPSSFVGTDLDKQLKQAGIKKLVVSGLMTHMCVSSTARDAVPLGYEVIIPE
CHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC
DATATRDLATWDNQIVSHAVLQRAALAGVADVFAEIKTTDQVLALPVN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
>Mature Secondary Structure
MKKLISGTALALSMATSSLGFADDKQRAPTIRTMSGAQASTSLPANATALLVIDFQNEYF
CCCHHCCHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEEEEECCCEE
VGKMPIPDGNKALMNTQRLVSFAHQHKMPVFFIRHIGPANGPLFAEGSKFAEFHPDLQPS
EEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEECCCCHHHCCCCCCCC
GIDRVITKATPSSFVGTDLDKQLKQAGIKKLVVSGLMTHMCVSSTARDAVPLGYEVIIPE
CHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC
DATATRDLATWDNQIVSHAVLQRAALAGVADVFAEIKTTDQVLALPVN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]