Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is gyrI [H]
Identifier: 157371261
GI number: 157371261
Start: 3325601
End: 3326071
Strand: Reverse
Name: gyrI [H]
Synonym: Spro_3021
Alternate gene names: 157371261
Gene position: 3326071-3325601 (Counterclockwise)
Preceding gene: 157371262
Following gene: 157371233
Centisome position: 61.04
GC content: 57.11
Gene sequence:
>471_bases ATGACGGTAAGAATTGAAGATAAATCAGCGGAAAGAGTGGTGGGTGTGCGAGTGGTCGGGCCTTATCCGCAAACCATCCC TCAGGGCTGCCAACGGCTGATGGCCTGGCAGCAGCAACACCAGGTGCCACTGGGGAAGTGGCTGGTGCTGTACTGGGACG ATCCGGCTGAAGTGGCGCCCGAGCGACTGCGGGCCGATGTGGTGTTTACCGTGGCGGATGATTTCGTATTGCCGACGTCG GGCAGTGAGGGTTTTGCGTTACAAACCCTGCCCGCCGGGCAATATGCGATTTACAACGTGCGCGTCAGCGACGGGGATTT CGAGCGGGTATGGGGTGATTTCTATCAGCGGGAACTGCCGGCCAGCGGCTATCAGCCAGTAGAAGGGGTGAGCTATGAGC ACTACCTTAATGACTGCGAGGCGGATGGTTACTTTGACCTGGATATTTACCAGACGGTGAAAAAAGGCTGA
Upstream 100 bases:
>100_bases TGAAAAAGGCGCTGGAATTGACCTTCTTCCCGGAACTGCTGGATGTGCGAACCGAGATTGGTGCCTGAACGGTATCCCGT ATTAGTGCGAGGAGAGGGCG
Downstream 100 bases:
>100_bases GTTTGCGGTGCAGGGAAGGGAAAATGCTGAGGCGTCAGGGAGAGAAAAGGGGCTGAACCCGGCGAATACCGGGCTCAGCT CTCTTATTATCGGCTAGAAG
Product: DNA gyrase inhibitor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MTVRIEDKSAERVVGVRVVGPYPQTIPQGCQRLMAWQQQHQVPLGKWLVLYWDDPAEVAPERLRADVVFTVADDFVLPTS GSEGFALQTLPAGQYAIYNVRVSDGDFERVWGDFYQRELPASGYQPVEGVSYEHYLNDCEADGYFDLDIYQTVKKG
Sequences:
>Translated_156_residues MTVRIEDKSAERVVGVRVVGPYPQTIPQGCQRLMAWQQQHQVPLGKWLVLYWDDPAEVAPERLRADVVFTVADDFVLPTS GSEGFALQTLPAGQYAIYNVRVSDGDFERVWGDFYQRELPASGYQPVEGVSYEHYLNDCEADGYFDLDIYQTVKKG >Mature_155_residues TVRIEDKSAERVVGVRVVGPYPQTIPQGCQRLMAWQQQHQVPLGKWLVLYWDDPAEVAPERLRADVVFTVADDFVLPTSG SEGFALQTLPAGQYAIYNVRVSDGDFERVWGDFYQRELPASGYQPVEGVSYEHYLNDCEADGYFDLDIYQTVKKG
Specific function: Inhibits the supercoiling activity of DNA gyrase. Protects cells from the DNA replication inhibitor microcin B17 (MccB17). Blocks MccB17 export from producing cells [H]
COG id: COG3449
COG function: function code L; DNA gyrase inhibitor
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788319, Length=154, Percent_Identity=35.7142857142857, Blast_Score=106, Evalue=7e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010499 - InterPro: IPR011256 [H]
Pfam domain/function: PF06445 AraC_E_bind [H]
EC number: NA
Molecular weight: Translated: 17697; Mature: 17566
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVRIEDKSAERVVGVRVVGPYPQTIPQGCQRLMAWQQQHQVPLGKWLVLYWDDPAEVAP CEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHCH ERLRADVVFTVADDFVLPTSGSEGFALQTLPAGQYAIYNVRVSDGDFERVWGDFYQRELP HHHCEEEEEEEECCEEEECCCCCCEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHCCC ASGYQPVEGVSYEHYLNDCEADGYFDLDIYQTVKKG CCCCCCCCCCCHHHHHCCCCCCCEEEHHHHHHHHCC >Mature Secondary Structure TVRIEDKSAERVVGVRVVGPYPQTIPQGCQRLMAWQQQHQVPLGKWLVLYWDDPAEVAP EEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHCH ERLRADVVFTVADDFVLPTSGSEGFALQTLPAGQYAIYNVRVSDGDFERVWGDFYQRELP HHHCEEEEEEEECCEEEECCCCCCEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHCCC ASGYQPVEGVSYEHYLNDCEADGYFDLDIYQTVKKG CCCCCCCCCCCHHHHHCCCCCCCEEEHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]