| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is flgK [H]
Identifier: 157371201
GI number: 157371201
Start: 3259876
End: 3261522
Strand: Reverse
Name: flgK [H]
Synonym: Spro_2961
Alternate gene names: 157371201
Gene position: 3261522-3259876 (Counterclockwise)
Preceding gene: 157371202
Following gene: 157371200
Centisome position: 59.86
GC content: 55.98
Gene sequence:
>1647_bases ATGTCCAATAGCTTAATCAATACCGCGATGAGCGGGCTGAATGCGGCTCAGGTGGCGCTCAGCACCGTCAGTAACAACAT CTCCAATTACAACGTGGCGGGCTATAACCGCCAAACGGCAATTCTGGCGCAGAATGGCGGTATGAGTACCATGAATGGCT TTATTGGCAACGGCGTTACCGTCACCAGCGTCAACCGCGAATATAATCAGTTCATTACCAACCAGCTGCGCGGCGCGCAG AGCCAGGCCGGGGCGCAGAACGCCTATTTCGAGAAAATTTCGCAGATCGATAATCTACTGGCCAGTAAAACCAATACCCT GTCGACCAACATGCAGGACTTCTTCAGTAACCTGGAGAATCTGGTCAGCAACGCCGGTGATGACGCAGCGCGTCAAACGG TGCTGGGCAAAGCCAATGGTCTGGTCAATCAGTTCAATAACACCGATAAATATCTGCGAGATATGGACAGCGGCGTTAAT CAGCAGCTCAGTGATAGCGCGACGCAGATCAACAGCTACAGCCAGCAGATTGCCAAACTCAATGATGAAATCACCCGCCT GCGCGGCAGCGGCGGTGAGCCGAATGCCTTACTGGATCAGCGCGACCAGTTGGTCACCGAGCTAAACCAGGTGGTGGGGG TGCAGGTGACCCAGCAGGACGGCGATGCTTATACGGTCTCTTTCGCCAACGGCCTGACCCTGGTGCAGGGTAATAATGCC TACCAGGTTGAAGCCATCCCCTCCAGCGGCGATCCTGCCCGTTTGACCATCGGCTATAACCGCGGCAACGGTGTCAGCGA AGTGCCTGAAGGGCAAATTACCAGCGGCAGCGTTAGCGGCGTGTTGAAATTCCGCACGGAATCGCTGGATGGCGCTCGCA ACCAACTGGGGCAGTTGGCGCTGGCGATGGCCGACAGTTTTAACCAGCAACACCGTGCAGGGTTTGATCTCAACGGCGAT GCCGGGACCGACTTCTTCAACTTTGGCGGCGGGCGCGTGGTGGATAACAGCCGCAATACCGGCGATGCGGCGCTGTCGGT GTCCTACACCGATACCGGCAAGGTGAAAGCCAATGACTACCGGGTAGAATTTGACGGCAGCAACTGGCAGGTGAGCCGTC TGCCGGACAACGTGAAGGTGAACGCCACCGCGGGTACCGATGCCGATGGCAAAGCGACGTTAAGTTTTGATGGCCTGAAG GTCGGCATCGAAGGTAACGCGCAAAAGAACGACAGTTTCACCGTGAAGCCGGTCAGCGACGTAGCGGGCAGCCTGAAGGT CGCCATCACCAACTCTTCAAACATCGCCGCTGCCGGTAAGGACGACAGCGGCCGCGGCGATAACGAAAACGCCAAAAAGC TGCTTGATCTGCAAACCAAGAAGCTGGTCGACGGCAAGGCCACCTTCAGCGGTGCTTACGCCAGCATGGTTAGCAGTGTC GGTAACCAAACGGCATCGGCCAAGGTTTCGGTGACCTCACAGAACAATATCGTCAAGCAGCTGACTATCCAACAGCAGTC GGCTTCCGGCGTTAACCTGGATGAAGAGTACGGTGAACTGCTGCGTTTCCAGCAGTATTACATGGCTAATGCGCAGGTGA TCCAGACCGCCAGCTCGATGTTTGATGCGTTACTGAATATCCGTTGA
Upstream 100 bases:
>100_bases TTTCCCCGCTTTTTGCCGATAACCAACACAGGCTGGGTGAACGACTCAGCAGATTAATTGACTTCTGTGGGCCAGCGGCG CCGCAGCAAAAGGAACTTTT
Downstream 100 bases:
>100_bases TTTTCATTTTAACCGGGGCCGCATTGGCTCCGGTCACCGATTTTGAGGAATCTGCACCATGCGTATGAGCACCAGCATGA TGTACCAACAGAACATGTCC
Product: flagellar hook-associated protein FlgK
Products: NA
Alternate protein names: HAP1 [H]
Number of amino acids: Translated: 548; Mature: 547
Protein sequence:
>548_residues MSNSLINTAMSGLNAAQVALSTVSNNISNYNVAGYNRQTAILAQNGGMSTMNGFIGNGVTVTSVNREYNQFITNQLRGAQ SQAGAQNAYFEKISQIDNLLASKTNTLSTNMQDFFSNLENLVSNAGDDAARQTVLGKANGLVNQFNNTDKYLRDMDSGVN QQLSDSATQINSYSQQIAKLNDEITRLRGSGGEPNALLDQRDQLVTELNQVVGVQVTQQDGDAYTVSFANGLTLVQGNNA YQVEAIPSSGDPARLTIGYNRGNGVSEVPEGQITSGSVSGVLKFRTESLDGARNQLGQLALAMADSFNQQHRAGFDLNGD AGTDFFNFGGGRVVDNSRNTGDAALSVSYTDTGKVKANDYRVEFDGSNWQVSRLPDNVKVNATAGTDADGKATLSFDGLK VGIEGNAQKNDSFTVKPVSDVAGSLKVAITNSSNIAAAGKDDSGRGDNENAKKLLDLQTKKLVDGKATFSGAYASMVSSV GNQTASAKVSVTSQNNIVKQLTIQQQSASGVNLDEEYGELLRFQQYYMANAQVIQTASSMFDALLNIR
Sequences:
>Translated_548_residues MSNSLINTAMSGLNAAQVALSTVSNNISNYNVAGYNRQTAILAQNGGMSTMNGFIGNGVTVTSVNREYNQFITNQLRGAQ SQAGAQNAYFEKISQIDNLLASKTNTLSTNMQDFFSNLENLVSNAGDDAARQTVLGKANGLVNQFNNTDKYLRDMDSGVN QQLSDSATQINSYSQQIAKLNDEITRLRGSGGEPNALLDQRDQLVTELNQVVGVQVTQQDGDAYTVSFANGLTLVQGNNA YQVEAIPSSGDPARLTIGYNRGNGVSEVPEGQITSGSVSGVLKFRTESLDGARNQLGQLALAMADSFNQQHRAGFDLNGD AGTDFFNFGGGRVVDNSRNTGDAALSVSYTDTGKVKANDYRVEFDGSNWQVSRLPDNVKVNATAGTDADGKATLSFDGLK VGIEGNAQKNDSFTVKPVSDVAGSLKVAITNSSNIAAAGKDDSGRGDNENAKKLLDLQTKKLVDGKATFSGAYASMVSSV GNQTASAKVSVTSQNNIVKQLTIQQQSASGVNLDEEYGELLRFQQYYMANAQVIQTASSMFDALLNIR >Mature_547_residues SNSLINTAMSGLNAAQVALSTVSNNISNYNVAGYNRQTAILAQNGGMSTMNGFIGNGVTVTSVNREYNQFITNQLRGAQS QAGAQNAYFEKISQIDNLLASKTNTLSTNMQDFFSNLENLVSNAGDDAARQTVLGKANGLVNQFNNTDKYLRDMDSGVNQ QLSDSATQINSYSQQIAKLNDEITRLRGSGGEPNALLDQRDQLVTELNQVVGVQVTQQDGDAYTVSFANGLTLVQGNNAY QVEAIPSSGDPARLTIGYNRGNGVSEVPEGQITSGSVSGVLKFRTESLDGARNQLGQLALAMADSFNQQHRAGFDLNGDA GTDFFNFGGGRVVDNSRNTGDAALSVSYTDTGKVKANDYRVEFDGSNWQVSRLPDNVKVNATAGTDADGKATLSFDGLKV GIEGNAQKNDSFTVKPVSDVAGSLKVAITNSSNIAAAGKDDSGRGDNENAKKLLDLQTKKLVDGKATFSGAYASMVSSVG NQTASAKVSVTSQNNIVKQLTIQQQSASGVNLDEEYGELLRFQQYYMANAQVIQTASSMFDALLNIR
Specific function: Unknown
COG id: COG1256
COG function: function code N; Flagellar hook-associated protein
Gene ontology:
Cell location: Secreted. Bacterial flagellum (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787323, Length=549, Percent_Identity=55.7377049180328, Blast_Score=597, Evalue=1e-172,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR001444 - InterPro: IPR002371 [H]
Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 58240; Mature: 58108
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: PS00588 FLAGELLA_BB_ROD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSLINTAMSGLNAAQVALSTVSNNISNYNVAGYNRQTAILAQNGGMSTMNGFIGNGVT CCCHHHHHHHHCCCHHHHHHHHHHCCCCCCEECCCCCCEEEEEECCCCHHHHHHCCCCEE VTSVNREYNQFITNQLRGAQSQAGAQNAYFEKISQIDNLLASKTNTLSTNMQDFFSNLEN EEECCHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH LVSNAGDDAARQTVLGKANGLVNQFNNTDKYLRDMDSGVNQQLSDSATQINSYSQQIAKL HHHCCCCHHHHHHHHHHHCCHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH NDEITRLRGSGGEPNALLDQRDQLVTELNQVVGVQVTQQDGDAYTVSFANGLTLVQGNNA HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEECCCEEEEECCCE YQVEAIPSSGDPARLTIGYNRGNGVSEVPEGQITSGSVSGVLKFRTESLDGARNQLGQLA EEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHH LAMADSFNQQHRAGFDLNGDAGTDFFNFGGGRVVDNSRNTGDAALSVSYTDTGKVKANDY HHHHHHCCHHHHCCCCCCCCCCCCCEECCCCEEECCCCCCCCEEEEEEECCCCCEEECCE RVEFDGSNWQVSRLPDNVKVNATAGTDADGKATLSFDGLKVGIEGNAQKNDSFTVKPVSD EEEECCCCEEEEECCCCEEEEEECCCCCCCEEEEEECCEEEEECCCCCCCCCEEEEEHHH VAGSLKVAITNSSNIAAAGKDDSGRGDNENAKKLLDLQTKKLVDGKATFSGAYASMVSSV CCCCEEEEEECCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH GNQTASAKVSVTSQNNIVKQLTIQQQSASGVNLDEEYGELLRFQQYYMANAQVIQTASSM CCCCCCEEEEEECCCCEEEHEEEECCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH FDALLNIR HHHHHCCC >Mature Secondary Structure SNSLINTAMSGLNAAQVALSTVSNNISNYNVAGYNRQTAILAQNGGMSTMNGFIGNGVT CCHHHHHHHHCCCHHHHHHHHHHCCCCCCEECCCCCCEEEEEECCCCHHHHHHCCCCEE VTSVNREYNQFITNQLRGAQSQAGAQNAYFEKISQIDNLLASKTNTLSTNMQDFFSNLEN EEECCHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH LVSNAGDDAARQTVLGKANGLVNQFNNTDKYLRDMDSGVNQQLSDSATQINSYSQQIAKL HHHCCCCHHHHHHHHHHHCCHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH NDEITRLRGSGGEPNALLDQRDQLVTELNQVVGVQVTQQDGDAYTVSFANGLTLVQGNNA HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEECCCEEEEECCCE YQVEAIPSSGDPARLTIGYNRGNGVSEVPEGQITSGSVSGVLKFRTESLDGARNQLGQLA EEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHH LAMADSFNQQHRAGFDLNGDAGTDFFNFGGGRVVDNSRNTGDAALSVSYTDTGKVKANDY HHHHHHCCHHHHCCCCCCCCCCCCCEECCCCEEECCCCCCCCEEEEEEECCCCCEEECCE RVEFDGSNWQVSRLPDNVKVNATAGTDADGKATLSFDGLKVGIEGNAQKNDSFTVKPVSD EEEECCCCEEEEECCCCEEEEEECCCCCCCEEEEEECCEEEEECCCCCCCCCEEEEEHHH VAGSLKVAITNSSNIAAAGKDDSGRGDNENAKKLLDLQTKKLVDGKATFSGAYASMVSSV CCCCEEEEEECCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH GNQTASAKVSVTSQNNIVKQLTIQQQSASGVNLDEEYGELLRFQQYYMANAQVIQTASSM CCCCCCEEEEEECCCCEEEHEEEECCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH FDALLNIR HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 8158647 [H]