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The map label for this gene is yoaB [H]

Identifier: 157371004

GI number: 157371004

Start: 3044689

End: 3045033

Strand: Direct

Name: yoaB [H]

Synonym: Spro_2764

Alternate gene names: 157371004

Gene position: 3044689-3045033 (Clockwise)

Preceding gene: 157370998

Following gene: 157371009

Centisome position: 55.88

GC content: 55.94

Gene sequence:

>345_bases
ATGAATATTGAAAGAATTGATCCCGCCGATCGCTGGTCTGAAGCCGTGGTTCACAACGACACCGTTTATTACACCAGCGT
GCCGGAAAATCTGGATGATGATGCGACCGCGCAGACCGCTAACGCCCTGGCGGCGATTGACGTGATCCTGGCCCGTGTGG
GTTCCGACAAAAGCCGGGTGCTGGACGCCACCATTTTTCTGGCCGACGGCGCTGACTTTGCCGGGATGAATGCCGCCTGG
GATGCCTGGGTGGTTGCCGGTAGTGCCCCAGTGCGCTGTACCGTGCAGGCAAAATTGATGAATCCGAAGTACAAGGTTGA
AATCAAAATCATTGCCGCGCTGTAA

Upstream 100 bases:

>100_bases
TATGCCAATCCTGCCGCGCGGCTACCACCGACTTTAACGTCGAGTATTTCTGCCGATGGCTGTGATACCCTACACGCGAT
TATGATATGGAGATAACCGA

Downstream 100 bases:

>100_bases
CGCAAAAAACCGCAGACGATAACGCCTGCGGTTTTATTTTGTCGTGTTTGCGGCTGATTAAGCCAGTTTGATGATCACCA
TCCCCGCCAGTAACAATACC

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MNIERIDPADRWSEAVVHNDTVYYTSVPENLDDDATAQTANALAAIDVILARVGSDKSRVLDATIFLADGADFAGMNAAW
DAWVVAGSAPVRCTVQAKLMNPKYKVEIKIIAAL

Sequences:

>Translated_114_residues
MNIERIDPADRWSEAVVHNDTVYYTSVPENLDDDATAQTANALAAIDVILARVGSDKSRVLDATIFLADGADFAGMNAAW
DAWVVAGSAPVRCTVQAKLMNPKYKVEIKIIAAL
>Mature_114_residues
MNIERIDPADRWSEAVVHNDTVYYTSVPENLDDDATAQTANALAAIDVILARVGSDKSRVLDATIFLADGADFAGMNAAW
DAWVVAGSAPVRCTVQAKLMNPKYKVEIKIIAAL

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI87081979, Length=114, Percent_Identity=71.9298245614035, Blast_Score=170, Evalue=2e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 12293; Mature: 12293

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: PS01094 UPF0076

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIERIDPADRWSEAVVHNDTVYYTSVPENLDDDATAQTANALAAIDVILARVGSDKSRV
CCCCCCCCCHHHCCCEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEE
LDATIFLADGADFAGMNAAWDAWVVAGSAPVRCTVQAKLMNPKYKVEIKIIAAL
EEEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEEEEEECCCCEEEEEEEEEEC
>Mature Secondary Structure
MNIERIDPADRWSEAVVHNDTVYYTSVPENLDDDATAQTANALAAIDVILARVGSDKSRV
CCCCCCCCCHHHCCCEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEE
LDATIFLADGADFAGMNAAWDAWVVAGSAPVRCTVQAKLMNPKYKVEIKIIAAL
EEEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEEEEEECCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]