The gene/protein map for NC_009832 is currently unavailable.
Definition Serratia proteamaculans 568 chromosome, complete genome.
Accession NC_009832
Length 5,448,853

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The map label for this gene is oppD [H]

Identifier: 157370979

GI number: 157370979

Start: 3017461

End: 3018321

Strand: Direct

Name: oppD [H]

Synonym: Spro_2739

Alternate gene names: 157370979

Gene position: 3017461-3018321 (Clockwise)

Preceding gene: 157370978

Following gene: 157370980

Centisome position: 55.38

GC content: 55.05

Gene sequence:

>861_bases
ATGCGAATGTTATGTTATCACATAACAAAAATCACAAGAAAAAGATCTGCCATGGATAACCAGCCCTCGCCGTTACTCAC
CGTAGAACACCTGACGCTGTCGCTTGATGGAGACGTCAAAATTCACGATTTGAATTTTACGCTGTATGCCGGCGAACGTC
TGTGTCTGTTGGGTGCATCGGGTTCAGGTAAATCACTCACTGCCGCCGCCATTTTGGGGACTCTACCGACTGGCGCGACA
GTCAATGGTTCCATTCGGCTGCAAGGGCAAGAACTCGCTGGCCGGCATCTGCAACAGCGCAAACGCCCCGCACTGGCAGC
CATCTTTCAGGATCCCTTTACCAGTCTCAATCCCCTGACCCGCGTGGGCCAGCAGCTAATCCTGGCACTGCAGGGGCAGA
ACAACATGAAAAAACAGCGGGCACAGCGTTGCGCCATCGAGTTGCTGGCAGTATTAGGCTTGCCGCCGGAGATCATCATG
TCACGCTATCCTGGCCAACTGTCTGGCGGACAATGCCAGCGAGTCTGCGCGGCGCTGGCATTGGTGGGTGAGAAAAGCCT
GCTAATCGCCGATGAGCCTACCACTGCACTGGACATGGTCAGCCAACATCAACTGATCGAGATCCTGAAAGCTTACACCG
AACGTCCTCACGCACCGGCATTGCTGTTTATTACCCACGATCTCACCGTTGCCGCCAACCTGTGTCAGCGCGCCATCGTG
ATGGTAGATGGCAAAATAGTCGCGCAGGGATCGTTCGCACAATTGCTGCATCACCCTGCTCACCCCTATACCCGGCAGTT
GGTTGCCACAGCGCAGCGCCCAACCTTCAAGCGGACATCGCCGTTGAGTCTGGTTGGTTAA

Upstream 100 bases:

>100_bases
GATAAGACCAACCTGACAACAAAACCCTCAGCATCATACCTTGCTTACCCCGCTTTACACTATTTCAAAGTATTTCGTAA
ATCCGCTGGTTATTTCCGGC

Downstream 100 bases:

>100_bases
CGGAGTGAACGGCATGTCAATCAGTGGAACGCTGCCCTTTATCAGCCTGCAGCAAGTCTGTCGGCGATATTCATCACAGT
CTGACGGACTGAAACCCACC

Product: ABC transporter-like protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: Stage 0 sporulation protein KD [H]

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MRMLCYHITKITRKRSAMDNQPSPLLTVEHLTLSLDGDVKIHDLNFTLYAGERLCLLGASGSGKSLTAAAILGTLPTGAT
VNGSIRLQGQELAGRHLQQRKRPALAAIFQDPFTSLNPLTRVGQQLILALQGQNNMKKQRAQRCAIELLAVLGLPPEIIM
SRYPGQLSGGQCQRVCAALALVGEKSLLIADEPTTALDMVSQHQLIEILKAYTERPHAPALLFITHDLTVAANLCQRAIV
MVDGKIVAQGSFAQLLHHPAHPYTRQLVATAQRPTFKRTSPLSLVG

Sequences:

>Translated_286_residues
MRMLCYHITKITRKRSAMDNQPSPLLTVEHLTLSLDGDVKIHDLNFTLYAGERLCLLGASGSGKSLTAAAILGTLPTGAT
VNGSIRLQGQELAGRHLQQRKRPALAAIFQDPFTSLNPLTRVGQQLILALQGQNNMKKQRAQRCAIELLAVLGLPPEIIM
SRYPGQLSGGQCQRVCAALALVGEKSLLIADEPTTALDMVSQHQLIEILKAYTERPHAPALLFITHDLTVAANLCQRAIV
MVDGKIVAQGSFAQLLHHPAHPYTRQLVATAQRPTFKRTSPLSLVG
>Mature_286_residues
MRMLCYHITKITRKRSAMDNQPSPLLTVEHLTLSLDGDVKIHDLNFTLYAGERLCLLGASGSGKSLTAAAILGTLPTGAT
VNGSIRLQGQELAGRHLQQRKRPALAAIFQDPFTSLNPLTRVGQQLILALQGQNNMKKQRAQRCAIELLAVLGLPPEIIM
SRYPGQLSGGQCQRVCAALALVGEKSLLIADEPTTALDMVSQHQLIEILKAYTERPHAPALLFITHDLTVAANLCQRAIV
MVDGKIVAQGSFAQLLHHPAHPYTRQLVATAQRPTFKRTSPLSLVG

Specific function: Part of the binding protein-dependent transport system for oligopeptides. Probably responsible for energy coupling to the transport system. Required for sporulation and competence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI153792144, Length=221, Percent_Identity=30.316742081448, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI27436953, Length=252, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI116734710, Length=212, Percent_Identity=26.8867924528302, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI6005701, Length=219, Percent_Identity=28.310502283105, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI9961250, Length=235, Percent_Identity=28.0851063829787, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI4505771, Length=235, Percent_Identity=28.0851063829787, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI9961252, Length=235, Percent_Identity=28.0851063829787, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI48994883, Length=261, Percent_Identity=40.2298850574713, Blast_Score=177, Evalue=6e-46,
Organism=Escherichia coli, GI1787759, Length=258, Percent_Identity=40.3100775193798, Blast_Score=175, Evalue=3e-45,
Organism=Escherichia coli, GI145693107, Length=262, Percent_Identity=37.7862595419847, Blast_Score=158, Evalue=5e-40,
Organism=Escherichia coli, GI1789963, Length=255, Percent_Identity=39.2156862745098, Blast_Score=152, Evalue=3e-38,
Organism=Escherichia coli, GI1788506, Length=263, Percent_Identity=38.4030418250951, Blast_Score=148, Evalue=4e-37,
Organism=Escherichia coli, GI1787500, Length=237, Percent_Identity=36.2869198312236, Blast_Score=146, Evalue=1e-36,
Organism=Escherichia coli, GI1789890, Length=234, Percent_Identity=38.4615384615385, Blast_Score=133, Evalue=2e-32,
Organism=Escherichia coli, GI1789962, Length=252, Percent_Identity=33.3333333333333, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1787548, Length=260, Percent_Identity=33.4615384615385, Blast_Score=121, Evalue=4e-29,
Organism=Escherichia coli, GI1789891, Length=209, Percent_Identity=38.2775119617225, Blast_Score=117, Evalue=7e-28,
Organism=Escherichia coli, GI1787758, Length=230, Percent_Identity=32.6086956521739, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1787547, Length=228, Percent_Identity=32.8947368421053, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1787105, Length=232, Percent_Identity=38.7931034482759, Blast_Score=98, Evalue=8e-22,
Organism=Escherichia coli, GI1786398, Length=231, Percent_Identity=31.6017316017316, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1788450, Length=251, Percent_Identity=30.6772908366534, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1788225, Length=251, Percent_Identity=29.8804780876494, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI87081791, Length=254, Percent_Identity=31.496062992126, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI48994997, Length=251, Percent_Identity=29.8804780876494, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1787370, Length=251, Percent_Identity=31.8725099601594, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1789672, Length=252, Percent_Identity=29.7619047619048, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI1787029, Length=223, Percent_Identity=28.6995515695067, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1786563, Length=221, Percent_Identity=33.4841628959276, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1786703, Length=203, Percent_Identity=35.4679802955665, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1787089, Length=222, Percent_Identity=35.1351351351351, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1789032, Length=235, Percent_Identity=29.3617021276596, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1788761, Length=236, Percent_Identity=29.2372881355932, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI87081834, Length=225, Percent_Identity=32.8888888888889, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI1787712, Length=241, Percent_Identity=31.1203319502075, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1786253, Length=220, Percent_Identity=30.9090909090909, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1790467, Length=234, Percent_Identity=28.2051282051282, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1787113, Length=239, Percent_Identity=33.8912133891213, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1789991, Length=246, Percent_Identity=26.4227642276423, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI87081709, Length=248, Percent_Identity=26.6129032258064, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI87082267, Length=248, Percent_Identity=27.8225806451613, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788644, Length=189, Percent_Identity=30.6878306878307, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1786872, Length=213, Percent_Identity=28.169014084507, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI48995001, Length=233, Percent_Identity=24.4635193133047, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1790739, Length=245, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1790544, Length=247, Percent_Identity=26.7206477732794, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1787164, Length=229, Percent_Identity=30.1310043668122, Blast_Score=68, Evalue=9e-13,
Organism=Escherichia coli, GI1789873, Length=227, Percent_Identity=26.431718061674, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1789593, Length=231, Percent_Identity=25.1082251082251, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1786345, Length=240, Percent_Identity=25.4166666666667, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1788053, Length=206, Percent_Identity=31.0679611650485, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI48994943, Length=227, Percent_Identity=26.8722466960352, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI212646699, Length=226, Percent_Identity=30.5309734513274, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI25146777, Length=223, Percent_Identity=29.5964125560538, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI193208177, Length=270, Percent_Identity=27.7777777777778, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17567265, Length=219, Percent_Identity=30.1369863013699, Blast_Score=66, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71996809, Length=218, Percent_Identity=28.4403669724771, Blast_Score=65, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI193211015, Length=218, Percent_Identity=28.4403669724771, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI193211017, Length=218, Percent_Identity=28.4403669724771, Blast_Score=64, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6322640, Length=246, Percent_Identity=29.2682926829268, Blast_Score=77, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6323217, Length=228, Percent_Identity=26.3157894736842, Blast_Score=66, Evalue=5e-12,
Organism=Drosophila melanogaster, GI19920532, Length=229, Percent_Identity=31.0043668122271, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24580930, Length=229, Percent_Identity=31.0043668122271, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI28574150, Length=226, Percent_Identity=24.3362831858407, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI116007328, Length=226, Percent_Identity=24.3362831858407, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28574259, Length=277, Percent_Identity=24.9097472924188, Blast_Score=65, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010066
- InterPro:   IPR013563 [H]

Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY [H]

EC number: NA

Molecular weight: Translated: 31067; Mature: 31067

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MRMLCYHITKITRKRSAMDNQPSPLLTVEHLTLSLDGDVKIHDLNFTLYAGERLCLLGAS
CCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCEEEEEEEEEEEECCEEEEEECC
GSGKSLTAAAILGTLPTGATVNGSIRLQGQELAGRHLQQRKRPALAAIFQDPFTSLNPLT
CCCCCCHHHHHHHCCCCCCEECCEEEEECHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHH
RVGQQLILALQGQNNMKKQRAQRCAIELLAVLGLPPEIIMSRYPGQLSGGQCQRVCAALA
HHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHH
LVGEKSLLIADEPTTALDMVSQHQLIEILKAYTERPHAPALLFITHDLTVAANLCQRAIV
HHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHEEE
MVDGKIVAQGSFAQLLHHPAHPYTRQLVATAQRPTFKRTSPLSLVG
EECCEEEECCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRMLCYHITKITRKRSAMDNQPSPLLTVEHLTLSLDGDVKIHDLNFTLYAGERLCLLGAS
CCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCEEEEEEEEEEEECCEEEEEECC
GSGKSLTAAAILGTLPTGATVNGSIRLQGQELAGRHLQQRKRPALAAIFQDPFTSLNPLT
CCCCCCHHHHHHHCCCCCCEECCEEEEECHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHH
RVGQQLILALQGQNNMKKQRAQRCAIELLAVLGLPPEIIMSRYPGQLSGGQCQRVCAALA
HHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHH
LVGEKSLLIADEPTTALDMVSQHQLIEILKAYTERPHAPALLFITHDLTVAANLCQRAIV
HHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHEEE
MVDGKIVAQGSFAQLLHHPAHPYTRQLVATAQRPTFKRTSPLSLVG
EECCEEEECCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]