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The map label for this gene is ygdH [C]

Identifier: 157370954

GI number: 157370954

Start: 2991210

End: 2991782

Strand: Direct

Name: ygdH [C]

Synonym: Spro_2714

Alternate gene names: 157370954

Gene position: 2991210-2991782 (Clockwise)

Preceding gene: 157370953

Following gene: 157370955

Centisome position: 54.9

GC content: 55.15

Gene sequence:

>573_bases
ATGCGTAACAATATCTGCGTTTTTTGTGGTGCCAGCGAAGGCGTTAATCCTGCTTATGCCGAGAATGCGCGGCAACTGGG
TCAAACGCTCGCCGCTCAGGGTCGACGCCTAATCTATGGCGGCGGCAAAAAAGGGTTGATGGGCATTGTGGCGGATGCCG
TGCTTGCCGCCGGAGGTGAGGCGGTGGGCATTATTCCTGAGCGGTTGGTAGAAGCAGAAACCGCACATCGTGGCCTGACT
GAACTGGAAGTGGTTCCGGACATGCACACCCGTAAGGCGCGCATGGCGGCTCTGGCAGACGGTTTTATTGCTCTGCCCGG
CGGCATAGGTACCCTCGAGGAACTGTTTGAAATCTGGACCTGGGGCCAGATCGGCTATCACAGTAAACCGGTTGGTTTGC
TGGATGTGAACGGGTTCTATCGCCCGCTAAACAGTTTCCTGCAGCACGTGGCCGATCAGGGCTTTATGCGCCATGACTAT
CTGGGCACCATGCACATCAGTGAATCAGCGCAAACCTTACTGCAACAATTTGACGACTATCAGCCCAAAACTTACGACCG
CTGGGCAAAATAA

Upstream 100 bases:

>100_bases
TTTATCAATTCCCTTAACCATTCAGCGCATCCTCAACTTGAACTCCGGCCAACAATTCGCTATACCACTGACTTCTTTAA
TGCAGTAAGGAAGAAAGTGC

Downstream 100 bases:

>100_bases
TTCAACTTGCCGCCGGCGGCCCGATGCCGCTGGCCTGCGTTACATTTCTGGTCAAACTCTGCTACTATCTCAACACATTT
TTCTTGTAAAAACGGCACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MRNNICVFCGASEGVNPAYAENARQLGQTLAAQGRRLIYGGGKKGLMGIVADAVLAAGGEAVGIIPERLVEAETAHRGLT
ELEVVPDMHTRKARMAALADGFIALPGGIGTLEELFEIWTWGQIGYHSKPVGLLDVNGFYRPLNSFLQHVADQGFMRHDY
LGTMHISESAQTLLQQFDDYQPKTYDRWAK

Sequences:

>Translated_190_residues
MRNNICVFCGASEGVNPAYAENARQLGQTLAAQGRRLIYGGGKKGLMGIVADAVLAAGGEAVGIIPERLVEAETAHRGLT
ELEVVPDMHTRKARMAALADGFIALPGGIGTLEELFEIWTWGQIGYHSKPVGLLDVNGFYRPLNSFLQHVADQGFMRHDY
LGTMHISESAQTLLQQFDDYQPKTYDRWAK
>Mature_190_residues
MRNNICVFCGASEGVNPAYAENARQLGQTLAAQGRRLIYGGGKKGLMGIVADAVLAAGGEAVGIIPERLVEAETAHRGLT
ELEVVPDMHTRKARMAALADGFIALPGGIGTLEELFEIWTWGQIGYHSKPVGLLDVNGFYRPLNSFLQHVADQGFMRHDY
LGTMHISESAQTLLQQFDDYQPKTYDRWAK

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LOG family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322406, Length=203, Percent_Identity=36.4532019704434, Blast_Score=142, Evalue=5e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005269 [H]

Pfam domain/function: PF03641 Lysine_decarbox [H]

EC number: NA

Molecular weight: Translated: 20806; Mature: 20806

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNNICVFCGASEGVNPAYAENARQLGQTLAAQGRRLIYGGGKKGLMGIVADAVLAAGGE
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCC
AVGIIPERLVEAETAHRGLTELEVVPDMHTRKARMAALADGFIALPGGIGTLEELFEIWT
EEEHHHHHHHHHHHHHCCCHHEEECCCCHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHC
WGQIGYHSKPVGLLDVNGFYRPLNSFLQHVADQGFMRHDYLGTMHISESAQTLLQQFDDY
CCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCHHHHCCCEEEECHHHHHHHHHHHCC
QPKTYDRWAK
CCCCHHHCCC
>Mature Secondary Structure
MRNNICVFCGASEGVNPAYAENARQLGQTLAAQGRRLIYGGGKKGLMGIVADAVLAAGGE
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCC
AVGIIPERLVEAETAHRGLTELEVVPDMHTRKARMAALADGFIALPGGIGTLEELFEIWT
EEEHHHHHHHHHHHHHCCCHHEEECCCCHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHC
WGQIGYHSKPVGLLDVNGFYRPLNSFLQHVADQGFMRHDYLGTMHISESAQTLLQQFDDY
CCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCHHHHCCCEEEECHHHHHHHHHHHCC
QPKTYDRWAK
CCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043; 2116366 [H]