| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is purU [H]
Identifier: 157370953
GI number: 157370953
Start: 2989603
End: 2990451
Strand: Direct
Name: purU [H]
Synonym: Spro_2713
Alternate gene names: 157370953
Gene position: 2989603-2990451 (Clockwise)
Preceding gene: 157370952
Following gene: 157370954
Centisome position: 54.87
GC content: 51.24
Gene sequence:
>849_bases ATGCCACACCAAAATGTACAAAGAAAAGTTTTGCGCACCATTTGTCCGGATGCCAAAGGCCTGATCGCCAAGATCACCAA TATTTGTTACAAACATGAACTCAACATTGTTCAGAACAATGAATTCGTTGATCACCGTACTGGCCGCTTCTTTATGCGTA CCGAGCTGGAAGGCATTTTTAACGACACTACTTTGCTGGCGGATCTCGATAGCGCACTGCCGGTGGGTTCGGTCCGCGAA CTGCATAACTCCGGCCGTCGTCGTATTGTGGTGCTGGTGACCAAAGAAGCGCATTGCCTGGGCGACTTGCTGATGAAAAG CGCTTACGGCGGCCTGGATGTGGAAATTGCGGCGGTTATCGGTAACCACGATACGCTGCAAACGTTGGTGGAACGTTTCG ATATCCCGTTCCACCTGGTCAGCCATGAAGGCCTGACGCGCGATCAACACGATCAGAAAATGATGGCCCAGATCGATCAG TATCAGCCTGATTACGTGGTGTTGGCCAAATATATGCGCGTACTGACGCCAGCATTTGTACAGCACTACCCGAACCAGGT GATTAATATTCACCACTCGTTCCTGCCGGCCTTTATCGGTGCACGGCCTTACCATCAGGCTTACGAACGTGGCGTGAAAA TCATCGGCGCTACGGCCCACTACGTTAACGATAATCTGGACGAAGGCCCGATCATCATGCAGGACGTGATTCATGTCGAT CACACCTATTCTGCTGAAGATATGATGCGTGCCGGACGAGACGTCGAGAAAAATGCGCTCAGCCGCGCGCTTTACCATGT GTTGGCCCAACGGGTATTTGTCTACGGTAACCGGACGGTTATTCTGTAA
Upstream 100 bases:
>100_bases TCAGGTCGCAGCCAATCCGGTCGCCGCTTGAAAATATAGATGATAAAAACTCTCGCCTGCGAAGACAGGACGTTCAGTAT CAGACAGGATCCTCACTCCC
Downstream 100 bases:
>100_bases TTGCTCAAGAAAGCGGTGCCTTTCGTTCAGGGATGCACCGCCACGAGTAAAAAATCGGCAAACGATTCATTTTCTGCATT TCAATACTTTACACGCCCGT
Product: formyltetrahydrofolate deformylase
Products: NA
Alternate protein names: Formyl-FH(4) hydrolase [H]
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MPHQNVQRKVLRTICPDAKGLIAKITNICYKHELNIVQNNEFVDHRTGRFFMRTELEGIFNDTTLLADLDSALPVGSVRE LHNSGRRRIVVLVTKEAHCLGDLLMKSAYGGLDVEIAAVIGNHDTLQTLVERFDIPFHLVSHEGLTRDQHDQKMMAQIDQ YQPDYVVLAKYMRVLTPAFVQHYPNQVINIHHSFLPAFIGARPYHQAYERGVKIIGATAHYVNDNLDEGPIIMQDVIHVD HTYSAEDMMRAGRDVEKNALSRALYHVLAQRVFVYGNRTVIL
Sequences:
>Translated_282_residues MPHQNVQRKVLRTICPDAKGLIAKITNICYKHELNIVQNNEFVDHRTGRFFMRTELEGIFNDTTLLADLDSALPVGSVRE LHNSGRRRIVVLVTKEAHCLGDLLMKSAYGGLDVEIAAVIGNHDTLQTLVERFDIPFHLVSHEGLTRDQHDQKMMAQIDQ YQPDYVVLAKYMRVLTPAFVQHYPNQVINIHHSFLPAFIGARPYHQAYERGVKIIGATAHYVNDNLDEGPIIMQDVIHVD HTYSAEDMMRAGRDVEKNALSRALYHVLAQRVFVYGNRTVIL >Mature_281_residues PHQNVQRKVLRTICPDAKGLIAKITNICYKHELNIVQNNEFVDHRTGRFFMRTELEGIFNDTTLLADLDSALPVGSVREL HNSGRRRIVVLVTKEAHCLGDLLMKSAYGGLDVEIAAVIGNHDTLQTLVERFDIPFHLVSHEGLTRDQHDQKMMAQIDQY QPDYVVLAKYMRVLTPAFVQHYPNQVINIHHSFLPAFIGARPYHQAYERGVKIIGATAHYVNDNLDEGPIIMQDVIHVDH TYSAEDMMRAGRDVEKNALSRALYHVLAQRVFVYGNRTVIL
Specific function: Produces formate from formyl-tetrahydrofolate. Provides the major source of formate for the purT-dependent synthesis of 5'-phosphoribosyl-N-formylglycinamide (FGAR) during aerobic growth. Has a role in regulating the one-carbon pool [H]
COG id: COG0788
COG function: function code F; Formyltetrahydrofolate hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ACT domain [H]
Homologues:
Organism=Homo sapiens, GI4503915, Length=157, Percent_Identity=31.8471337579618, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI209869995, Length=157, Percent_Identity=31.8471337579618, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI209869993, Length=157, Percent_Identity=31.8471337579618, Blast_Score=90, Evalue=3e-18, Organism=Escherichia coli, GI1787483, Length=278, Percent_Identity=88.8489208633094, Blast_Score=519, Evalue=1e-148, Organism=Escherichia coli, GI1788846, Length=103, Percent_Identity=42.7184466019417, Blast_Score=95, Evalue=5e-21, Organism=Caenorhabditis elegans, GI17567511, Length=196, Percent_Identity=29.0816326530612, Blast_Score=97, Evalue=9e-21, Organism=Drosophila melanogaster, GI24582400, Length=184, Percent_Identity=28.2608695652174, Blast_Score=82, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR002376 - InterPro: IPR004810 [H]
Pfam domain/function: PF01842 ACT; PF00551 Formyl_trans_N [H]
EC number: =3.5.1.10 [H]
Molecular weight: Translated: 32146; Mature: 32015
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHQNVQRKVLRTICPDAKGLIAKITNICYKHELNIVQNNEFVDHRTGRFFMRTELEGIF CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEHHHHHH NDTTLLADLDSALPVGSVRELHNSGRRRIVVLVTKEAHCLGDLLMKSAYGGLDVEIAAVI CCHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCCCEEEEEEE GNHDTLQTLVERFDIPFHLVSHEGLTRDQHDQKMMAQIDQYQPDYVVLAKYMRVLTPAFV CCCHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH QHYPNQVINIHHSFLPAFIGARPYHQAYERGVKIIGATAHYVNDNLDEGPIIMQDVIHVD HHCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEEEHHHHCCCCCCCCHHHHHHHHHC HTYSAEDMMRAGRDVEKNALSRALYHVLAQRVFVYGNRTVIL CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEC >Mature Secondary Structure PHQNVQRKVLRTICPDAKGLIAKITNICYKHELNIVQNNEFVDHRTGRFFMRTELEGIF CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEEEHHHHHH NDTTLLADLDSALPVGSVRELHNSGRRRIVVLVTKEAHCLGDLLMKSAYGGLDVEIAAVI CCHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCCCCEEEEEEE GNHDTLQTLVERFDIPFHLVSHEGLTRDQHDQKMMAQIDQYQPDYVVLAKYMRVLTPAFV CCCHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH QHYPNQVINIHHSFLPAFIGARPYHQAYERGVKIIGATAHYVNDNLDEGPIIMQDVIHVD HHCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEEEHHHHCCCCCCCCHHHHHHHHHC HTYSAEDMMRAGRDVEKNALSRALYHVLAQRVFVYGNRTVIL CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]