| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is smvA [H]
Identifier: 157370927
GI number: 157370927
Start: 2957421
End: 2958935
Strand: Direct
Name: smvA [H]
Synonym: Spro_2687
Alternate gene names: 157370927
Gene position: 2957421-2958935 (Clockwise)
Preceding gene: 157370925
Following gene: 157370928
Centisome position: 54.28
GC content: 57.1
Gene sequence:
>1515_bases ATGGCAACGCATCCGCGTCGCCTGCTTTTTTGGAATAATATTATGCACGCAAACAACCGCTGGTTGATCCTGGCAATGAT CTCCAGCGCGCTATTTTTGATCATTATCGATATGACGGTGCTATACACCGCATTGCCACGGCTGACCCAGGCGCTGGACG CCAGCGCCTCGCAAAAATTATGGATTGTGAATGCCTACCCGCTAGTGGTCGCCGGTTTACTGCCCGGTGCGGGCATGCTG AGCGATCGCATTGGTCATAAACGGCTGTTTATGGCCGGATTGCCGGTGTTTGCCGTCGCCTCCCTTTGTGCCGCCTTTTC TCCTTCAGCCCAATGGCTGATCGCCGCCCGCGTATTCCTCGCGGTAGGTGCAGCGATGATGATGCCTGCAACCCTGTCCA TTGTCCGCCATGTGTTTACCGACGAACGTGAACGCGCCCTGGCGATTGGCATTTGGGCCGCAGTCGCGTCCGGTGGTGCC GCTATCGGCCCGGTGGTCGGTGGAGTCTTGCTGGAGTATTTCTGGTGGGGATCGGTATTTTTGATCAACGTCCCTGTCGT CATGGTGGTGCTGCCGCTGGCCTGGCGATTGATACCGCACTGCGGTGGGGAAAATAAACGCCCTTACGATATCATCGGGT CAGTGCAGATCATGGCCGGTCTGGTGGGTAGCATCTATGCCCTGAAGGAGCTGAGCAAAACAACGCCCTCCATTTCTGCG CTGGCAATCGCCGCCACCATTGGCATTTTGTCGCTCTGGCTGTTTGTTCGTCGACAGCGTCGGGCCCGTTATCCGATGAT CGACTTCTCACTATTTCAGAATCGGCTGTTTGCCGGCGGCGTCGGCGTGGCTCTGGTGTCGATGGTTGCGTTAGTCGGTG TGGAACTGGTACTGACTCAACGCCTGCAACTGGTGCTTGAGCTGAGTCCATTACAGGCCGCGCTGTTTATTCTGCCGATC CCGGTGGCCTCCGCACTGGCCGGTCCGCTGGCCGGTTTACTGCTGCCGCGTTACGGCGAGCGCAACATGATATTCGGTGG ATTGTTCCTGACCGGCCTGGGCATTGCCGGGCTGGCCCTGCTTTACCAGAACAGCCTGATGTCGCAGTTGGTTTGTCTGT TTATCGCCGGTTTTGGCATCGGTGGTGCCATTACCGCCGCGTCAACCGCCATCATGCTCAACGCTCCGGAAGAAAAATCC GGTATGGCTGCCTCGATCGAGGATGTGTCCTATGAGCTGGGTGGCGTGCTCGGTATTACCTTGCTGGGTGGATTGATGAC CGCCATCTATAGCCACAGCCTGGTGTTACCCGACAATCTGCCGGTGGGCGATGTCGCTTACGACAGCATTGATGAAGCCC TGCGGCTGGCTGCCAATCTGGCTGTCGAACAGGCTGAACAACTGAGAAAACTGGCTCGGCTGGCTTTCGACCGAGCATTT ATCGCGGTGTTGATTGCAGCAGCATTACTGATGGCGCTAAGCGCCGGCGTGGCAAAATTGGTCTTACGCAAGTAA
Upstream 100 bases:
>100_bases ATGCTCCGTTGACGTCCCATTGAGAAACCCTCTTTTCAATACATACGTATGGATATATATTACGCCAGTATACCACCCGG CGCGTTCGGGTGGTGACCTT
Downstream 100 bases:
>100_bases TGATACCAAGCCGCTGTTGTTGTTAACGCATTCTGCTTACACTGAATGGGCAATTTGCTTGTCGGATTTATCGTTATCGG TTTCAGCAATTGCATTGATG
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 504; Mature: 503
Protein sequence:
>504_residues MATHPRRLLFWNNIMHANNRWLILAMISSALFLIIIDMTVLYTALPRLTQALDASASQKLWIVNAYPLVVAGLLPGAGML SDRIGHKRLFMAGLPVFAVASLCAAFSPSAQWLIAARVFLAVGAAMMMPATLSIVRHVFTDERERALAIGIWAAVASGGA AIGPVVGGVLLEYFWWGSVFLINVPVVMVVLPLAWRLIPHCGGENKRPYDIIGSVQIMAGLVGSIYALKELSKTTPSISA LAIAATIGILSLWLFVRRQRRARYPMIDFSLFQNRLFAGGVGVALVSMVALVGVELVLTQRLQLVLELSPLQAALFILPI PVASALAGPLAGLLLPRYGERNMIFGGLFLTGLGIAGLALLYQNSLMSQLVCLFIAGFGIGGAITAASTAIMLNAPEEKS GMAASIEDVSYELGGVLGITLLGGLMTAIYSHSLVLPDNLPVGDVAYDSIDEALRLAANLAVEQAEQLRKLARLAFDRAF IAVLIAAALLMALSAGVAKLVLRK
Sequences:
>Translated_504_residues MATHPRRLLFWNNIMHANNRWLILAMISSALFLIIIDMTVLYTALPRLTQALDASASQKLWIVNAYPLVVAGLLPGAGML SDRIGHKRLFMAGLPVFAVASLCAAFSPSAQWLIAARVFLAVGAAMMMPATLSIVRHVFTDERERALAIGIWAAVASGGA AIGPVVGGVLLEYFWWGSVFLINVPVVMVVLPLAWRLIPHCGGENKRPYDIIGSVQIMAGLVGSIYALKELSKTTPSISA LAIAATIGILSLWLFVRRQRRARYPMIDFSLFQNRLFAGGVGVALVSMVALVGVELVLTQRLQLVLELSPLQAALFILPI PVASALAGPLAGLLLPRYGERNMIFGGLFLTGLGIAGLALLYQNSLMSQLVCLFIAGFGIGGAITAASTAIMLNAPEEKS GMAASIEDVSYELGGVLGITLLGGLMTAIYSHSLVLPDNLPVGDVAYDSIDEALRLAANLAVEQAEQLRKLARLAFDRAF IAVLIAAALLMALSAGVAKLVLRK >Mature_503_residues ATHPRRLLFWNNIMHANNRWLILAMISSALFLIIIDMTVLYTALPRLTQALDASASQKLWIVNAYPLVVAGLLPGAGMLS DRIGHKRLFMAGLPVFAVASLCAAFSPSAQWLIAARVFLAVGAAMMMPATLSIVRHVFTDERERALAIGIWAAVASGGAA IGPVVGGVLLEYFWWGSVFLINVPVVMVVLPLAWRLIPHCGGENKRPYDIIGSVQIMAGLVGSIYALKELSKTTPSISAL AIAATIGILSLWLFVRRQRRARYPMIDFSLFQNRLFAGGVGVALVSMVALVGVELVLTQRLQLVLELSPLQAALFILPIP VASALAGPLAGLLLPRYGERNMIFGGLFLTGLGIAGLALLYQNSLMSQLVCLFIAGFGIGGAITAASTAIMLNAPEEKSG MAASIEDVSYELGGVLGITLLGGLMTAIYSHSLVLPDNLPVGDVAYDSIDEALRLAANLAVEQAEQLRKLARLAFDRAFI AVLIAAALLMALSAGVAKLVLRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]
Homologues:
Organism=Escherichia coli, GI87081983, Length=385, Percent_Identity=27.7922077922078, Blast_Score=129, Evalue=4e-31, Organism=Escherichia coli, GI1790195, Length=399, Percent_Identity=29.8245614035088, Blast_Score=124, Evalue=1e-29, Organism=Escherichia coli, GI1788710, Length=495, Percent_Identity=23.4343434343434, Blast_Score=108, Evalue=1e-24, Organism=Escherichia coli, GI1789042, Length=406, Percent_Identity=23.3990147783251, Blast_Score=106, Evalue=4e-24, Organism=Escherichia coli, GI1788392, Length=413, Percent_Identity=25.4237288135593, Blast_Score=93, Evalue=4e-20, Organism=Saccharomyces cerevisiae, GI6324954, Length=383, Percent_Identity=24.2819843342037, Blast_Score=86, Evalue=9e-18, Organism=Saccharomyces cerevisiae, GI6322958, Length=473, Percent_Identity=23.2558139534884, Blast_Score=70, Evalue=9e-13, Organism=Saccharomyces cerevisiae, GI6323735, Length=337, Percent_Identity=24.9258160237389, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 53661; Mature: 53530
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATHPRRLLFWNNIMHANNRWLILAMISSALFLIIIDMTVLYTALPRLTQALDASASQKL CCCCCCHHHEECCEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE WIVNAYPLVVAGLLPGAGMLSDRIGHKRLFMAGLPVFAVASLCAAFSPSAQWLIAARVFL EEEECHHHHHHHHCCCCCHHHHHCCCHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHH AVGAAMMMPATLSIVRHVFTDERERALAIGIWAAVASGGAAIGPVVGGVLLEYFWWGSVF HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHH LINVPVVMVVLPLAWRLIPHCGGENKRPYDIIGSVQIMAGLVGSIYALKELSKTTPSISA HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LAIAATIGILSLWLFVRRQRRARYPMIDFSLFQNRLFAGGVGVALVSMVALVGVELVLTQ HHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH RLQLVLELSPLQAALFILPIPVASALAGPLAGLLLPRYGERNMIFGGLFLTGLGIAGLAL HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHH LYQNSLMSQLVCLFIAGFGIGGAITAASTAIMLNAPEEKSGMAASIEDVSYELGGVLGIT HHHHHHHHHHHHHHHHHCCCCHHHHHHCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHH LLGGLMTAIYSHSLVLPDNLPVGDVAYDSIDEALRLAANLAVEQAEQLRKLARLAFDRAF HHHHHHHHHHHCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAVLIAAALLMALSAGVAKLVLRK HHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ATHPRRLLFWNNIMHANNRWLILAMISSALFLIIIDMTVLYTALPRLTQALDASASQKL CCCCCHHHEECCEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE WIVNAYPLVVAGLLPGAGMLSDRIGHKRLFMAGLPVFAVASLCAAFSPSAQWLIAARVFL EEEECHHHHHHHHCCCCCHHHHHCCCHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHH AVGAAMMMPATLSIVRHVFTDERERALAIGIWAAVASGGAAIGPVVGGVLLEYFWWGSVF HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHH LINVPVVMVVLPLAWRLIPHCGGENKRPYDIIGSVQIMAGLVGSIYALKELSKTTPSISA HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LAIAATIGILSLWLFVRRQRRARYPMIDFSLFQNRLFAGGVGVALVSMVALVGVELVLTQ HHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH RLQLVLELSPLQAALFILPIPVASALAGPLAGLLLPRYGERNMIFGGLFLTGLGIAGLAL HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHH LYQNSLMSQLVCLFIAGFGIGGAITAASTAIMLNAPEEKSGMAASIEDVSYELGGVLGIT HHHHHHHHHHHHHHHHHCCCCHHHHHHCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHH LLGGLMTAIYSHSLVLPDNLPVGDVAYDSIDEALRLAANLAVEQAEQLRKLARLAFDRAF HHHHHHHHHHHCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAVLIAAALLMALSAGVAKLVLRK HHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7926834; 11677609 [H]