| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is folM [H]
Identifier: 157370829
GI number: 157370829
Start: 2847148
End: 2847870
Strand: Direct
Name: folM [H]
Synonym: Spro_2589
Alternate gene names: 157370829
Gene position: 2847148-2847870 (Clockwise)
Preceding gene: 157370827
Following gene: 157370830
Centisome position: 52.25
GC content: 57.68
Gene sequence:
>723_bases ATGGAACTTCACAACTCAGCCCCGGTGCTGATTACGGGCGGCGCACGCCGGATTGGACTGGCATTGGCCAGGTCATTCTT GCAACGTGATATTCCCGTGATCATTGCCTATCGCAGCGACTACCCGGCGCTGGGCGAACTGAAAAGACTGGGGGCAACCT GCATTCAGGGCGATTTCTCAACGCACGACGGTATCTATCGTTTCGCCGAGCAGGTTCGCCAGGCAGCGCCCAAACTGCGC GCGGTGATCCACAACGCCAGCGCCTGGCAGGCCGAATCACCGGAAGTACCACCGGAGCAAGTGATGGCGGCCATGTTGCA AATTCACGTTTATACGCCTTATCTGCTCAATCAACTGCTGGAATCTTGTCTGTTGGGCCAGGGGCAAGCCGGTGCGGATA TCATCCATCTTACCGACTATGTGGTGGAGAAAGGCAGCGACAAGCACATTGCCTATGCCGCCAGTAAGGCCGCGCTGGAC AATATGACCCGCTCTTTTGCCCGCAAGCTGGCACCCGAAGTTAAAGTCAACGCCATCGCCCCGGCGCTGATTATTTTCAA TCCGGGCGACGACGAGCATTATCGGCAACAGGCGCTGGCAAAATCACTGATGAAAATCGCCCCAGGCGAGAGCGAAGTGG TCAATCTGGTGAACTATCTGCTGGACAGTCGCTATGTCACCGGCCGTACCCACGGTGTCGACGGCGGACGCCCGCTGCGC TAA
Upstream 100 bases:
>100_bases CATCCTGAAATGGATAATCGATGCGAAGCTTTAACGAATTTCCGCCGTATAATGGCATAATTCCCCTATTGTTTGCCAGT CTGTCCAGGAGCTTTAATCA
Downstream 100 bases:
>100_bases CGCATGATCTGCATGGCGTATCGCGGAGCCCCGCGTTATGCTGAATTTCGTTATTCTGATAAAACCGCTGAATATGCATA AAATTGTTTTTGTGGAAGAC
Product: short chain dehydrogenase
Products: NA
Alternate protein names: DHFR [H]
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MELHNSAPVLITGGARRIGLALARSFLQRDIPVIIAYRSDYPALGELKRLGATCIQGDFSTHDGIYRFAEQVRQAAPKLR AVIHNASAWQAESPEVPPEQVMAAMLQIHVYTPYLLNQLLESCLLGQGQAGADIIHLTDYVVEKGSDKHIAYAASKAALD NMTRSFARKLAPEVKVNAIAPALIIFNPGDDEHYRQQALAKSLMKIAPGESEVVNLVNYLLDSRYVTGRTHGVDGGRPLR
Sequences:
>Translated_240_residues MELHNSAPVLITGGARRIGLALARSFLQRDIPVIIAYRSDYPALGELKRLGATCIQGDFSTHDGIYRFAEQVRQAAPKLR AVIHNASAWQAESPEVPPEQVMAAMLQIHVYTPYLLNQLLESCLLGQGQAGADIIHLTDYVVEKGSDKHIAYAASKAALD NMTRSFARKLAPEVKVNAIAPALIIFNPGDDEHYRQQALAKSLMKIAPGESEVVNLVNYLLDSRYVTGRTHGVDGGRPLR >Mature_240_residues MELHNSAPVLITGGARRIGLALARSFLQRDIPVIIAYRSDYPALGELKRLGATCIQGDFSTHDGIYRFAEQVRQAAPKLR AVIHNASAWQAESPEVPPEQVMAAMLQIHVYTPYLLNQLLESCLLGQGQAGADIIHLTDYVVEKGSDKHIAYAASKAALD NMTRSFARKLAPEVKVNAIAPALIIFNPGDDEHYRQQALAKSLMKIAPGESEVVNLVNYLLDSRYVTGRTHGVDGGRPLR
Specific function: Catalyzes the reduction of dihydrofolate to tetrahydrofolate [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family. FolM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787891, Length=233, Percent_Identity=66.5236051502146, Blast_Score=319, Evalue=1e-88, Organism=Caenorhabditis elegans, GI115534694, Length=242, Percent_Identity=25.6198347107438, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.5.1.3 [H]
Molecular weight: Translated: 26281; Mature: 26281
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELHNSAPVLITGGARRIGLALARSFLQRDIPVIIAYRSDYPALGELKRLGATCIQGDFS CCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCC THDGIYRFAEQVRQAAPKLRAVIHNASAWQAESPEVPPEQVMAAMLQIHVYTPYLLNQLL CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHH ESCLLGQGQAGADIIHLTDYVVEKGSDKHIAYAASKAALDNMTRSFARKLAPEVKVNAIA HHHHCCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC PALIIFNPGDDEHYRQQALAKSLMKIAPGESEVVNLVNYLLDSRYVTGRTHGVDGGRPLR CEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCC >Mature Secondary Structure MELHNSAPVLITGGARRIGLALARSFLQRDIPVIIAYRSDYPALGELKRLGATCIQGDFS CCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCC THDGIYRFAEQVRQAAPKLRAVIHNASAWQAESPEVPPEQVMAAMLQIHVYTPYLLNQLL CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHH ESCLLGQGQAGADIIHLTDYVVEKGSDKHIAYAASKAALDNMTRSFARKLAPEVKVNAIA HHHHCCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC PALIIFNPGDDEHYRQQALAKSLMKIAPGESEVVNLVNYLLDSRYVTGRTHGVDGGRPLR CEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA